Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yeaG [H]

Identifier: 99080373

GI number: 99080373

Start: 563004

End: 564938

Strand: Direct

Name: yeaG [H]

Synonym: TM1040_0532

Alternate gene names: 99080373

Gene position: 563004-564938 (Clockwise)

Preceding gene: 99080368

Following gene: 99080374

Centisome position: 17.59

GC content: 55.61

Gene sequence:

>1935_bases
ATGAATAAAGTTGCAGAGCTTTTTGCAGAGGCCTATGGCCAGACGCGCGAGCAGGAAATGTCTTTGCAGGACTATCTCAT
GGCCTGTCGCGATGACCCAAGCATGTATGCAAATGTTGCAGAACGGATGCTGAAGGCCATTGGTGACGAGGAACTCGTAG
ATACATCGAAGGACGCCCGACTGGGGCCGATTTTCCAGAACCGGACCATCAAGCGATACTCCGCCTTCAAGGATTTCTAT
GGCATGGAGGACACGGTCGAGCGGATCGTGGGATATTTTCGCCATGCAGCGCAGGGCCTTGAGGAGCGCAAACAGATCCT
CTACCTGCTCGGACCGGTGGGCGGTGGCAAGTCATCGCTTGCGGAACGGCTAAAGCGCATTGTTGAGGATGAACCGATCT
ACGTCCTGAAGGCGGGCGATCAGATGTCGCCGATCTTTGAAAGCCCGCTGGGCCTGTTTGACCCCGTGCGCATGGGCAAA
CTCCTTGAAGAAGAATACGGGATCGCCACCCATCGTCTGCCGGGCCTGATGTCACCCTGGGCCGTGCAGCGCCTTGATGA
GTTCGAAGGCGACATCAACAAGTTTACCGTTGTGAAACTCCACCCCTCCCGCCTGCGTCGCATCTGTGTCGCCAAGGTCG
AGCCGGGGGACGAGAACAATCAGGACATCTCCACCCTTGTCGGTAAGGTCGATATTCGCCAGCTGGAGCACTTTAGCCAA
GACAATCCAGATGCCTACAGCTTTTCTGGTGGGCTGAACCGCGCCACGCAGGGTGTGCTTGAATTCGTCGAGATGTTCAA
AGCGCCGATCAAGATGCTGCACCCGCTGCTAACCGCGACGCAGGAAGGCAACTATATGGGGACGGAGAGCTTTGGCGCGA
TCCCATTCAATGGCCTGATCCTAGCGCACTCGAACGAAAGCGAATGGCAGACGTTCAAGAACAACAAAAACAATGAGGCC
TTTATCGACCGGGTGTCGATCGTGAAGGTGCCTTACTGTCTGCGGGTCTCGGACGAGGCGCAAATCTACGAAAAACTGAT
CCAGAATTCCGAGCTGCGCGAGGCACCCTGCGCGCCGGAAACCCTCAAGATCCTCAGCCGTTTCTCGGTGCTGACGCGTC
TGAAGCCGCATGAAAACTCCAACCTTTACAGTAAGATGCGGGTCTATGACGGCGAAAGCCTGAAGGACACCGACCCCAAG
GCCAAGACGGTGCAGGAATATCAGGACCGCGCTGGTGTTGATGAGGGTATGAACGGTGTCTCCACCCGCTTTGCCTTCAA
GGTTCTCTCGTCGGTGTTCAACCACGACACGCAAGAGGTCGCCGCCGATCCGGTGCATCTGATGTATGTGCTCGAAGGGA
TGATCAAACGCGAGCAGTTCCCCCAGGAGACCGAGCAGAAATACCTGGAGTTCATCAAGACCGAACTGGCCCCCCGCTAT
GAAGAATTCATCGGCAACGAAATCCAGAAAGCCTATCTCGAGAGCTATACGGAATACGGCCAGAACGTCTTTGATCGCTA
TATCTCTTATGCGGATGCATGGATCGAGGAGCAGGACTACAAGGATCCTGACACCGGTCAGCTTTATGATCGTGAGGTGC
TGGACGCGGAGCTCTCCAAGATCGAAAAGCCTGTGGGGATCGCAAATCCCAAGGACTTCCGCAATGAGGTCGTGAAATTC
GCCCTGCGTCATCGCGCCAACACCGGGTCAAATCCGGCATGGAACTCCTACGAGAAACTGCGGGATGTGATCGAGAAACA
TATGTTCTCTCAAGTCGAAGAGCTGCTGCCGGTGATCTCTTTTGGCTCCAAGAAAGACAGCAAGACCGAGAGCAAACACC
AAGAGTTCGTCGAGCGCATGCGCGCCCATGGCTACACCGACAGGCAGGTCCGACGCCTTGTCGAGTGGTACATGCGGGTG
AACAAGGCGGGCTAA

Upstream 100 bases:

>100_bases
ACGCGGATACCTTCATGGCCCTCGTCAGGCCACCCTGTTCGCGTGCGATCCCAAAACCCAGGAGGCCGGGTAACGACGTT
AACCAGGAGGCGAGACCCCG

Downstream 100 bases:

>100_bases
CAGGCGGGAGGTGTCTTCATGCACCACTTCATCGACAGGCGCGCAAATCCAAAAGGCAAGAGTTTGGGGAACCGGCAACG
GTTCCTCAGACGCGCGCGCG

Product: putative serine protein kinase, PrkA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 644; Mature: 644

Protein sequence:

>644_residues
MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDARLGPIFQNRTIKRYSAFKDFY
GMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGK
LLEEEYGIATHRLPGLMSPWAVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ
DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLILAHSNESEWQTFKNNKNNEA
FIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPETLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPK
AKTVQEYQDRAGVDEGMNGVSTRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY
EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSKIEKPVGIANPKDFRNEVVKF
ALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVISFGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRV
NKAG

Sequences:

>Translated_644_residues
MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDARLGPIFQNRTIKRYSAFKDFY
GMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGK
LLEEEYGIATHRLPGLMSPWAVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ
DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLILAHSNESEWQTFKNNKNNEA
FIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPETLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPK
AKTVQEYQDRAGVDEGMNGVSTRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY
EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSKIEKPVGIANPKDFRNEVVKF
ALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVISFGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRV
NKAG
>Mature_644_residues
MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDARLGPIFQNRTIKRYSAFKDFY
GMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGK
LLEEEYGIATHRLPGLMSPWAVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ
DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLILAHSNESEWQTFKNNKNNEA
FIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPETLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPK
AKTVQEYQDRAGVDEGMNGVSTRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY
EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSKIEKPVGIANPKDFRNEVVKF
ALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVISFGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRV
NKAG

Specific function: Unknown

COG id: COG2766

COG function: function code T; Putative Ser protein kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prkA family [H]

Homologues:

Organism=Escherichia coli, GI1788083, Length=638, Percent_Identity=66.7711598746082, Blast_Score=905, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013153
- InterPro:   IPR010650
- InterPro:   IPR016230 [H]

Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]

EC number: NA

Molecular weight: Translated: 74067; Mature: 74067

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDAR
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCC
LGPIFQNRTIKRYSAFKDFYGMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSL
CCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCHHHH
AERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGKLLEEEYGIATHRLPGLMSPW
HHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHH
AVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ
HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLI
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
LAHSNESEWQTFKNNKNNEAFIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPE
EEECCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHH
TLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPKAKTVQEYQDRAGVDEGMNGV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHH
STRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY
HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IEKPVGIANPKDFRNEVVKFALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVIS
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRVNKAG
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDAR
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCC
LGPIFQNRTIKRYSAFKDFYGMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSL
CCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCHHHH
AERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGKLLEEEYGIATHRLPGLMSPW
HHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHH
AVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ
HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLI
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE
LAHSNESEWQTFKNNKNNEAFIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPE
EEECCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHH
TLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPKAKTVQEYQDRAGVDEGMNGV
HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHH
STRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY
HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH
EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
IEKPVGIANPKDFRNEVVKFALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVIS
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRVNKAG
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]