| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yeaG [H]
Identifier: 99080373
GI number: 99080373
Start: 563004
End: 564938
Strand: Direct
Name: yeaG [H]
Synonym: TM1040_0532
Alternate gene names: 99080373
Gene position: 563004-564938 (Clockwise)
Preceding gene: 99080368
Following gene: 99080374
Centisome position: 17.59
GC content: 55.61
Gene sequence:
>1935_bases ATGAATAAAGTTGCAGAGCTTTTTGCAGAGGCCTATGGCCAGACGCGCGAGCAGGAAATGTCTTTGCAGGACTATCTCAT GGCCTGTCGCGATGACCCAAGCATGTATGCAAATGTTGCAGAACGGATGCTGAAGGCCATTGGTGACGAGGAACTCGTAG ATACATCGAAGGACGCCCGACTGGGGCCGATTTTCCAGAACCGGACCATCAAGCGATACTCCGCCTTCAAGGATTTCTAT GGCATGGAGGACACGGTCGAGCGGATCGTGGGATATTTTCGCCATGCAGCGCAGGGCCTTGAGGAGCGCAAACAGATCCT CTACCTGCTCGGACCGGTGGGCGGTGGCAAGTCATCGCTTGCGGAACGGCTAAAGCGCATTGTTGAGGATGAACCGATCT ACGTCCTGAAGGCGGGCGATCAGATGTCGCCGATCTTTGAAAGCCCGCTGGGCCTGTTTGACCCCGTGCGCATGGGCAAA CTCCTTGAAGAAGAATACGGGATCGCCACCCATCGTCTGCCGGGCCTGATGTCACCCTGGGCCGTGCAGCGCCTTGATGA GTTCGAAGGCGACATCAACAAGTTTACCGTTGTGAAACTCCACCCCTCCCGCCTGCGTCGCATCTGTGTCGCCAAGGTCG AGCCGGGGGACGAGAACAATCAGGACATCTCCACCCTTGTCGGTAAGGTCGATATTCGCCAGCTGGAGCACTTTAGCCAA GACAATCCAGATGCCTACAGCTTTTCTGGTGGGCTGAACCGCGCCACGCAGGGTGTGCTTGAATTCGTCGAGATGTTCAA AGCGCCGATCAAGATGCTGCACCCGCTGCTAACCGCGACGCAGGAAGGCAACTATATGGGGACGGAGAGCTTTGGCGCGA TCCCATTCAATGGCCTGATCCTAGCGCACTCGAACGAAAGCGAATGGCAGACGTTCAAGAACAACAAAAACAATGAGGCC TTTATCGACCGGGTGTCGATCGTGAAGGTGCCTTACTGTCTGCGGGTCTCGGACGAGGCGCAAATCTACGAAAAACTGAT CCAGAATTCCGAGCTGCGCGAGGCACCCTGCGCGCCGGAAACCCTCAAGATCCTCAGCCGTTTCTCGGTGCTGACGCGTC TGAAGCCGCATGAAAACTCCAACCTTTACAGTAAGATGCGGGTCTATGACGGCGAAAGCCTGAAGGACACCGACCCCAAG GCCAAGACGGTGCAGGAATATCAGGACCGCGCTGGTGTTGATGAGGGTATGAACGGTGTCTCCACCCGCTTTGCCTTCAA GGTTCTCTCGTCGGTGTTCAACCACGACACGCAAGAGGTCGCCGCCGATCCGGTGCATCTGATGTATGTGCTCGAAGGGA TGATCAAACGCGAGCAGTTCCCCCAGGAGACCGAGCAGAAATACCTGGAGTTCATCAAGACCGAACTGGCCCCCCGCTAT GAAGAATTCATCGGCAACGAAATCCAGAAAGCCTATCTCGAGAGCTATACGGAATACGGCCAGAACGTCTTTGATCGCTA TATCTCTTATGCGGATGCATGGATCGAGGAGCAGGACTACAAGGATCCTGACACCGGTCAGCTTTATGATCGTGAGGTGC TGGACGCGGAGCTCTCCAAGATCGAAAAGCCTGTGGGGATCGCAAATCCCAAGGACTTCCGCAATGAGGTCGTGAAATTC GCCCTGCGTCATCGCGCCAACACCGGGTCAAATCCGGCATGGAACTCCTACGAGAAACTGCGGGATGTGATCGAGAAACA TATGTTCTCTCAAGTCGAAGAGCTGCTGCCGGTGATCTCTTTTGGCTCCAAGAAAGACAGCAAGACCGAGAGCAAACACC AAGAGTTCGTCGAGCGCATGCGCGCCCATGGCTACACCGACAGGCAGGTCCGACGCCTTGTCGAGTGGTACATGCGGGTG AACAAGGCGGGCTAA
Upstream 100 bases:
>100_bases ACGCGGATACCTTCATGGCCCTCGTCAGGCCACCCTGTTCGCGTGCGATCCCAAAACCCAGGAGGCCGGGTAACGACGTT AACCAGGAGGCGAGACCCCG
Downstream 100 bases:
>100_bases CAGGCGGGAGGTGTCTTCATGCACCACTTCATCGACAGGCGCGCAAATCCAAAAGGCAAGAGTTTGGGGAACCGGCAACG GTTCCTCAGACGCGCGCGCG
Product: putative serine protein kinase, PrkA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDARLGPIFQNRTIKRYSAFKDFY GMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGK LLEEEYGIATHRLPGLMSPWAVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLILAHSNESEWQTFKNNKNNEA FIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPETLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPK AKTVQEYQDRAGVDEGMNGVSTRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSKIEKPVGIANPKDFRNEVVKF ALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVISFGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRV NKAG
Sequences:
>Translated_644_residues MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDARLGPIFQNRTIKRYSAFKDFY GMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGK LLEEEYGIATHRLPGLMSPWAVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLILAHSNESEWQTFKNNKNNEA FIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPETLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPK AKTVQEYQDRAGVDEGMNGVSTRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSKIEKPVGIANPKDFRNEVVKF ALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVISFGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRV NKAG >Mature_644_residues MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDARLGPIFQNRTIKRYSAFKDFY GMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSLAERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGK LLEEEYGIATHRLPGLMSPWAVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLILAHSNESEWQTFKNNKNNEA FIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPETLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPK AKTVQEYQDRAGVDEGMNGVSTRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSKIEKPVGIANPKDFRNEVVKF ALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVISFGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRV NKAG
Specific function: Unknown
COG id: COG2766
COG function: function code T; Putative Ser protein kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prkA family [H]
Homologues:
Organism=Escherichia coli, GI1788083, Length=638, Percent_Identity=66.7711598746082, Blast_Score=905, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013153 - InterPro: IPR010650 - InterPro: IPR016230 [H]
Pfam domain/function: PF08298 AAA_PrkA; PF06798 PrkA [H]
EC number: NA
Molecular weight: Translated: 74067; Mature: 74067
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDAR CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCC LGPIFQNRTIKRYSAFKDFYGMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSL CCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCHHHH AERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGKLLEEEYGIATHRLPGLMSPW HHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHH AVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLI CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE LAHSNESEWQTFKNNKNNEAFIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPE EEECCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHH TLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPKAKTVQEYQDRAGVDEGMNGV HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHH STRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH IEKPVGIANPKDFRNEVVKFALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVIS HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRVNKAG CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNKVAELFAEAYGQTREQEMSLQDYLMACRDDPSMYANVAERMLKAIGDEELVDTSKDAR CCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCC LGPIFQNRTIKRYSAFKDFYGMEDTVERIVGYFRHAAQGLEERKQILYLLGPVGGGKSSL CCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHCCCCCCCHHHH AERLKRIVEDEPIYVLKAGDQMSPIFESPLGLFDPVRMGKLLEEEYGIATHRLPGLMSPW HHHHHHHHCCCCEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHCCCCCCCHH AVQRLDEFEGDINKFTVVKLHPSRLRRICVAKVEPGDENNQDISTLVGKVDIRQLEHFSQ HHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCC DNPDAYSFSGGLNRATQGVLEFVEMFKAPIKMLHPLLTATQEGNYMGTESFGAIPFNGLI CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE LAHSNESEWQTFKNNKNNEAFIDRVSIVKVPYCLRVSDEAQIYEKLIQNSELREAPCAPE EEECCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHH TLKILSRFSVLTRLKPHENSNLYSKMRVYDGESLKDTDPKAKTVQEYQDRAGVDEGMNGV HHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHCCCHH STRFAFKVLSSVFNHDTQEVAADPVHLMYVLEGMIKREQFPQETEQKYLEFIKTELAPRY HHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHH EEFIGNEIQKAYLESYTEYGQNVFDRYISYADAWIEEQDYKDPDTGQLYDREVLDAELSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH IEKPVGIANPKDFRNEVVKFALRHRANTGSNPAWNSYEKLRDVIEKHMFSQVEELLPVIS HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FGSKKDSKTESKHQEFVERMRAHGYTDRQVRRLVEWYMRVNKAG CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]