Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080363

Identifier: 99080363

GI number: 99080363

Start: 548599

End: 548973

Strand: Reverse

Name: 99080363

Synonym: TM1040_0522

Alternate gene names: NA

Gene position: 548973-548599 (Counterclockwise)

Preceding gene: 99080364

Following gene: 99080362

Centisome position: 17.15

GC content: 61.07

Gene sequence:

>375_bases
ATGTCCGAGGTCACTGCAAGCTGCCTGTGCGGCGATATCCGCGTCAGAGCCTCCGGGTCCCCCATCGGTGTCGGCCTGTG
TCACTGCATGGATTGTCGCAAGCACCATGGTGCGGTGTTCTGGGCCGCGGCGGTTTACCCGGCTGAGGCGGTCGAAGTAT
TCGGCCAGACGCAACAATATCAGGGCCGCCATTTTTGCCCGAGATGCGGATCATCGGTCTATTCATGCAGCGAAGGTGAG
GTGGAGCTCCATCTCGGAGCAATGGATCAGCCAAACCAGTTCACGCCGACCTATGAGCTATGGACAGACCGGCGCGAGCA
CTGGCTCACCCCACTCGCCAGAGCCCATCAGCATTCTCGCAATCGCGGGGCGTGA

Upstream 100 bases:

>100_bases
TGACACTGGTGGCCTTTGCCAATCGCACCCGTGCCAGGTTTGCCTTGACCGGAGCAGACCACCAGGCAAGCTGAGCCCTC
ATGCGCTGAGGAGGTCCACC

Downstream 100 bases:

>100_bases
GGACCGGGGCGGCGTGCGCCGGAGGCGTCTTTCTATGCAGTATGTCTTGCAGGACACAGCTGCGCGACAATTTCACACGG
CCCGTCTGATCCAAGACTGT

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSEVTASCLCGDIRVRASGSPIGVGLCHCMDCRKHHGAVFWAAAVYPAEAVEVFGQTQQYQGRHFCPRCGSSVYSCSEGE
VELHLGAMDQPNQFTPTYELWTDRREHWLTPLARAHQHSRNRGA

Sequences:

>Translated_124_residues
MSEVTASCLCGDIRVRASGSPIGVGLCHCMDCRKHHGAVFWAAAVYPAEAVEVFGQTQQYQGRHFCPRCGSSVYSCSEGE
VELHLGAMDQPNQFTPTYELWTDRREHWLTPLARAHQHSRNRGA
>Mature_123_residues
SEVTASCLCGDIRVRASGSPIGVGLCHCMDCRKHHGAVFWAAAVYPAEAVEVFGQTQQYQGRHFCPRCGSSVYSCSEGEV
ELHLGAMDQPNQFTPTYELWTDRREHWLTPLARAHQHSRNRGA

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13807; Mature: 13675

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVTASCLCGDIRVRASGSPIGVGLCHCMDCRKHHGAVFWAAAVYPAEAVEVFGQTQQY
CCCCCCHHEECCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHCCCCCC
QGRHFCPRCGSSVYSCSEGEVELHLGAMDQPNQFTPTYELWTDRREHWLTPLARAHQHSR
CCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC
NRGA
CCCC
>Mature Secondary Structure 
SEVTASCLCGDIRVRASGSPIGVGLCHCMDCRKHHGAVFWAAAVYPAEAVEVFGQTQQY
CCCCCHHEECCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEHHCCHHHHHHHCCCCCC
QGRHFCPRCGSSVYSCSEGEVELHLGAMDQPNQFTPTYELWTDRREHWLTPLARAHQHSR
CCCCCCCCCCCCCEECCCCCEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCC
NRGA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA