| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080343
Identifier: 99080343
GI number: 99080343
Start: 529955
End: 530149
Strand: Reverse
Name: 99080343
Synonym: TM1040_0502
Alternate gene names: NA
Gene position: 530149-529955 (Counterclockwise)
Preceding gene: 99080347
Following gene: 99080342
Centisome position: 16.56
GC content: 60.0
Gene sequence:
>195_bases ATGCAACATCTCGAAGAACAGATCGCTTATCTGAGCCGGACCGTCGACGAGCTCAACGAGGTTGTGACCAGCCAACAGGC GGATCTCGATCTGCTGAAGCGCCGCGTTCAGATGCTGATGGAGCGCGAGGCGCAGCGCGAAGCAGAGGGCTCTGGCGGAG CTGTCTTTGGCGATGAGCGCCCGCCCCATTACTAA
Upstream 100 bases:
>100_bases AGTGAGCAAGGTGCGACACCCTTCCGGCGCTTCAGGACTCCCATAGACGCGCGGTCGTGCCCGCGCTACATCAGCCATTC ACACAAGGGAGACCCCGGGC
Downstream 100 bases:
>100_bases CGGCTCCGGCCGTTTTGATCGGGGTTGCGCGGGCTTCGCCCTTGCTACGGTCGTTAAAGTTTGGACAAGATTTTGCACAA ATTGACCCATCTGCCCATTC
Product: SlyX protein, putative
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MQHLEEQIAYLSRTVDELNEVVTSQQADLDLLKRRVQMLMEREAQREAEGSGGAVFGDERPPHY
Sequences:
>Translated_64_residues MQHLEEQIAYLSRTVDELNEVVTSQQADLDLLKRRVQMLMEREAQREAEGSGGAVFGDERPPHY >Mature_64_residues MQHLEEQIAYLSRTVDELNEVVTSQQADLDLLKRRVQMLMEREAQREAEGSGGAVFGDERPPHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7372; Mature: 7372
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHLEEQIAYLSRTVDELNEVVTSQQADLDLLKRRVQMLMEREAQREAEGSGGAVFGDER CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PPHY CCCC >Mature Secondary Structure MQHLEEQIAYLSRTVDELNEVVTSQQADLDLLKRRVQMLMEREAQREAEGSGGAVFGDER CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PPHY CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA