| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080322
Identifier: 99080322
GI number: 99080322
Start: 502866
End: 503246
Strand: Reverse
Name: 99080322
Synonym: TM1040_0481
Alternate gene names: NA
Gene position: 503246-502866 (Counterclockwise)
Preceding gene: 99080326
Following gene: 99080320
Centisome position: 15.72
GC content: 66.14
Gene sequence:
>381_bases ATGGCGTCTGCGGCACTTCCGCCCTCACGGAGCACCCGCGCGCCCGCCTCGACCGCCAGCGGGTTTGCGGCAGCGACCAT CCAGTTCTCCGCCTCGACAGGCGTGCCCGCATCCCGCGCAGCCATCGCAGCAGCGGCGGCTTCGGAGAGCGAGAGCCCCG CCGCACCAGCGCCCGTCGTCGCTGTTTCAGGGGCAACCGCATCTGCGGCCTGTTGTGCCGACAAAGGATGCGCCAGCGCC GCACAGAGCGCCGCGCCTAAAAATAATGGTCTCATATCTTTCCTCCCAAATCGCGCTGCCCGCGTTGCACCGGACTCTGC GCTTACAACATGGCAGGCACCACCTGATCCGGTGGGCGATGCCCATCTTCAAATGTCTTGA
Upstream 100 bases:
>100_bases TGATGGCACCCGTGGAGGCATTGTAGTAGACCAGAAAGCCCCACCACCGAGGCCAGAGGATTGCGGCTCCACCAGCCCAA GCACGGCCTGCACCGCAACC
Downstream 100 bases:
>100_bases TATTCAATAGAACCTTCTCGCCCATTTCGATCCGCCCCTCGATCGTAGCAGACCCCATATGAGGCAGGAGCACCACATTG GGCAGCTCGCGCAGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MASAALPPSRSTRAPASTASGFAAATIQFSASTGVPASRAAIAAAAASESESPAAPAPVVAVSGATASAACCADKGCASA AQSAAPKNNGLISFLPNRAARVAPDSALTTWQAPPDPVGDAHLQMS
Sequences:
>Translated_126_residues MASAALPPSRSTRAPASTASGFAAATIQFSASTGVPASRAAIAAAAASESESPAAPAPVVAVSGATASAACCADKGCASA AQSAAPKNNGLISFLPNRAARVAPDSALTTWQAPPDPVGDAHLQMS >Mature_125_residues ASAALPPSRSTRAPASTASGFAAATIQFSASTGVPASRAAIAAAAASESESPAAPAPVVAVSGATASAACCADKGCASAA QSAAPKNNGLISFLPNRAARVAPDSALTTWQAPPDPVGDAHLQMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12046; Mature: 11915
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAALPPSRSTRAPASTASGFAAATIQFSASTGVPASRAAIAAAAASESESPAAPAPVV CCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEE AVSGATASAACCADKGCASAAQSAAPKNNGLISFLPNRAARVAPDSALTTWQAPPDPVGD EECCCCCCHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCC AHLQMS CEEECC >Mature Secondary Structure ASAALPPSRSTRAPASTASGFAAATIQFSASTGVPASRAAIAAAAASESESPAAPAPVV CCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCEE AVSGATASAACCADKGCASAAQSAAPKNNGLISFLPNRAARVAPDSALTTWQAPPDPVGD EECCCCCCHHHHCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEECCCCCCCCCC AHLQMS CEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA