Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080315

Identifier: 99080315

GI number: 99080315

Start: 493430

End: 494182

Strand: Reverse

Name: 99080315

Synonym: TM1040_0474

Alternate gene names: NA

Gene position: 494182-493430 (Counterclockwise)

Preceding gene: 99080317

Following gene: 99080314

Centisome position: 15.44

GC content: 60.42

Gene sequence:

>753_bases
ATGTCCCTCAGAACGAGCCTCAAGCCCGGCGTCGCGATTGCGCTGGCGCTTATCTTCTCCCTCCCACACAGCGCGCTGCA
CGCAAATTCCGCGGGGTTTTCTCTGGTGGGGGATGGGGGCTTCTTCATGCGCACCTCTACCCCGTCGGCGCGCGAGGCGA
TCCTGAATGACGATGCCACGGGGCGTGGCGCAGTTTCGATGAACCCGAGCGCCGCAAGCCTTTTTCGCGGGCGCAGCAGC
GGAAGTCTATTTGCACGCGCTGCCGTTGCGGTTGGTGTCGATGTAGCAGAGATCATGAACGTGATCGCCAGCGCCGAGGC
CGGGCGGGCCAACTATGACGCGGTCCAGCATGGCGCCAAGATCAAGCCACCTGCAAAACCCACCGACATGACGCTGCTGG
AAATCTATACCTGGATCGACGCAACACCGGGGCAGCCGCATGCGATCGGCCGGTATCAGTTCATTCCTGCCACCCTGCGC
CGCCTGGTGAAACACCAGGGCGTGCCTTTGGGGCGCAAGTTCAACAAGTCCTTGCAGGACCAACTGGCGCATCAGCTGAT
TGAAGAAGCGGGCCTGTCGCAGTTCAAGGCTGGCGAAATCAGCCAGACCAAGTTCATGAACAACCTCGCCAAGATCTGGG
CCGGGCTACCGACCTCGAACGGAAAATCCTATTATCACAACTACGCAGGAAACCGCGCCACGGTCACATGGGATACCTAC
AAGGCGCGCATGGATGCCATCTTTTCTGGCTGA

Upstream 100 bases:

>100_bases
ATGCGGGGTTTGCGAAAGAGGCTCCGCGCGCGCCCTAAACCAAATCTCAACCACATTGCGGCAAATTGAGTGGCGAAATC
ACCCGCAGAAGCAGGTCCAT

Downstream 100 bases:

>100_bases
CGCGCTGACCTACGAGACGGGCCTGTTGTGCGGGAATTGCGCAGAGGGGACAGATTGGCCCTGTTTACAGGCGAAAAGAC
GCTAGGTGCTCCCAATACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MSLRTSLKPGVAIALALIFSLPHSALHANSAGFSLVGDGGFFMRTSTPSAREAILNDDATGRGAVSMNPSAASLFRGRSS
GSLFARAAVAVGVDVAEIMNVIASAEAGRANYDAVQHGAKIKPPAKPTDMTLLEIYTWIDATPGQPHAIGRYQFIPATLR
RLVKHQGVPLGRKFNKSLQDQLAHQLIEEAGLSQFKAGEISQTKFMNNLAKIWAGLPTSNGKSYYHNYAGNRATVTWDTY
KARMDAIFSG

Sequences:

>Translated_250_residues
MSLRTSLKPGVAIALALIFSLPHSALHANSAGFSLVGDGGFFMRTSTPSAREAILNDDATGRGAVSMNPSAASLFRGRSS
GSLFARAAVAVGVDVAEIMNVIASAEAGRANYDAVQHGAKIKPPAKPTDMTLLEIYTWIDATPGQPHAIGRYQFIPATLR
RLVKHQGVPLGRKFNKSLQDQLAHQLIEEAGLSQFKAGEISQTKFMNNLAKIWAGLPTSNGKSYYHNYAGNRATVTWDTY
KARMDAIFSG
>Mature_249_residues
SLRTSLKPGVAIALALIFSLPHSALHANSAGFSLVGDGGFFMRTSTPSAREAILNDDATGRGAVSMNPSAASLFRGRSSG
SLFARAAVAVGVDVAEIMNVIASAEAGRANYDAVQHGAKIKPPAKPTDMTLLEIYTWIDATPGQPHAIGRYQFIPATLRR
LVKHQGVPLGRKFNKSLQDQLAHQLIEEAGLSQFKAGEISQTKFMNNLAKIWAGLPTSNGKSYYHNYAGNRATVTWDTYK
ARMDAIFSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26778; Mature: 26647

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRTSLKPGVAIALALIFSLPHSALHANSAGFSLVGDGGFFMRTSTPSAREAILNDDAT
CCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCEEEEECCCHHHHHHHCCCCC
GRGAVSMNPSAASLFRGRSSGSLFARAAVAVGVDVAEIMNVIASAEAGRANYDAVQHGAK
CCCEEEECCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCC
IKPPAKPTDMTLLEIYTWIDATPGQPHAIGRYQFIPATLRRLVKHQGVPLGRKFNKSLQD
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCHHHHHHHHH
QLAHQLIEEAGLSQFKAGEISQTKFMNNLAKIWAGLPTSNGKSYYHNYAGNRATVTWDTY
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEHHH
KARMDAIFSG
HHHHHHHCCC
>Mature Secondary Structure 
SLRTSLKPGVAIALALIFSLPHSALHANSAGFSLVGDGGFFMRTSTPSAREAILNDDAT
CCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCEEEECCCEEEEECCCHHHHHHHCCCCC
GRGAVSMNPSAASLFRGRSSGSLFARAAVAVGVDVAEIMNVIASAEAGRANYDAVQHGAK
CCCEEEECCCHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCC
IKPPAKPTDMTLLEIYTWIDATPGQPHAIGRYQFIPATLRRLVKHQGVPLGRKFNKSLQD
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCHHHHHHHHH
QLAHQLIEEAGLSQFKAGEISQTKFMNNLAKIWAGLPTSNGKSYYHNYAGNRATVTWDTY
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEEEEHHH
KARMDAIFSG
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA