| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080294
Identifier: 99080294
GI number: 99080294
Start: 471312
End: 471992
Strand: Reverse
Name: 99080294
Synonym: TM1040_0453
Alternate gene names: NA
Gene position: 471992-471312 (Counterclockwise)
Preceding gene: 99080295
Following gene: 99080293
Centisome position: 14.75
GC content: 62.7
Gene sequence:
>681_bases ATGACATACACACTCTATATTGCAGATCGCATGTATTCCAGCTGGTCTTTGCGCGGCTGGCTCATGCTCGAGAAGTTCTC CCTGCCCTACGACACGCGGCTGGTGGGACTCTACAACGGAACCATGGCGCAGGACCTTGCCGAGGTTGCACCGGCTCGAT TGGTGCCCACGCTGGTCCTGCCGGATGGCACCGTGGTTGGCGAAACCATGGCCATGGCTGAGACCCTCGCCGAGCGTCAC CCCGAAGCCGGGCTCTGGCCCGCATCAGAAGCCAGTCGGGCCACGGCGCGCTGGCTCTGCGCAGAGATGGCGGCGGGGTT TGAGGCCTTGCGGTCGGCCTGCCCCATGCAGCTTGGTCATATCTGGCAGGGATTTGAGCCTTCGGAGGCCGTTCTCAACG ATCTAAGCCGACTGGAGAAACTCTTCGCCCACGCGCGTGCGGTCTCTGGCCACGCACGGGGCCCTCTTTTTGGCGCTTAT AGCCTTGCCGATGTATTCTACACCCCAGTTGCGGCACGGGTCATCGGATTTGACCTCCCGGTCTCTACAGAAACCCGCGC CTACTGCGTGGAGCTTCTGAGCGATCCCGCGGTGCTTGCGTGGCAGGCGGAAGCGCGCAAAGTCCACTACGACCCGGAAC CCTATGCGCTGGATCTGGAGCGCAAACCCTGGGCGCTGTGA
Upstream 100 bases:
>100_bases AGCACGGGATGGAGTGCCGGAGCGATCAATCAAATTTTGTGATGCGTGAGCGCACAAACATTAGCTTTCCTGATGCATGT GGCGTCGCTAATCTCTCCCC
Downstream 100 bases:
>100_bases TCCCAGCCTGCGATTTCGCGCTGGACTTACGCCATCCTTAACCAATCGGTAACCACGTTTTTAAATGCTGCTCCCTATGG GCCTGTTTTGAGGCACCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione S-Transferase Domain-Containing Protein; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase Family Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase-Like; Glutathione-S-Transferase Protein; Glutathione S-Transferase Protein; Glutathione S-Transferase N-Terminal Domain Protein; Glutathione S-Transferase Domain; Glutathione S-Transferase N-Terminal Domain-Containing; Stringent Starvation Protein A; GSH-Dependent Dehydroascorbate Reductase; Maleylacetoacetate Isomerase; Glutathione S-Transferase N-Terminal; Glutathione-S-Tranferase Family Protein
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTYTLYIADRMYSSWSLRGWLMLEKFSLPYDTRLVGLYNGTMAQDLAEVAPARLVPTLVLPDGTVVGETMAMAETLAERH PEAGLWPASEASRATARWLCAEMAAGFEALRSACPMQLGHIWQGFEPSEAVLNDLSRLEKLFAHARAVSGHARGPLFGAY SLADVFYTPVAARVIGFDLPVSTETRAYCVELLSDPAVLAWQAEARKVHYDPEPYALDLERKPWAL
Sequences:
>Translated_226_residues MTYTLYIADRMYSSWSLRGWLMLEKFSLPYDTRLVGLYNGTMAQDLAEVAPARLVPTLVLPDGTVVGETMAMAETLAERH PEAGLWPASEASRATARWLCAEMAAGFEALRSACPMQLGHIWQGFEPSEAVLNDLSRLEKLFAHARAVSGHARGPLFGAY SLADVFYTPVAARVIGFDLPVSTETRAYCVELLSDPAVLAWQAEARKVHYDPEPYALDLERKPWAL >Mature_225_residues TYTLYIADRMYSSWSLRGWLMLEKFSLPYDTRLVGLYNGTMAQDLAEVAPARLVPTLVLPDGTVVGETMAMAETLAERHP EAGLWPASEASRATARWLCAEMAAGFEALRSACPMQLGHIWQGFEPSEAVLNDLSRLEKLFAHARAVSGHARGPLFGAYS LADVFYTPVAARVIGFDLPVSTETRAYCVELLSDPAVLAWQAEARKVHYDPEPYALDLERKPWAL
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25039; Mature: 24908
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYTLYIADRMYSSWSLRGWLMLEKFSLPYDTRLVGLYNGTMAQDLAEVAPARLVPTLVL CEEEEEEECHHHCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHCHHHHCCEEEC PDGTVVGETMAMAETLAERHPEAGLWPASEASRATARWLCAEMAAGFEALRSACPMQLGH CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IWQGFEPSEAVLNDLSRLEKLFAHARAVSGHARGPLFGAYSLADVFYTPVAARVIGFDLP HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC VSTETRAYCVELLSDPAVLAWQAEARKVHYDPEPYALDLERKPWAL CCCCHHHHHHHHHCCCCEEEEECCCCEECCCCCCCEEECCCCCCCC >Mature Secondary Structure TYTLYIADRMYSSWSLRGWLMLEKFSLPYDTRLVGLYNGTMAQDLAEVAPARLVPTLVL EEEEEEECHHHCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHCHHHHCCEEEC PDGTVVGETMAMAETLAERHPEAGLWPASEASRATARWLCAEMAAGFEALRSACPMQLGH CCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH IWQGFEPSEAVLNDLSRLEKLFAHARAVSGHARGPLFGAYSLADVFYTPVAARVIGFDLP HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC VSTETRAYCVELLSDPAVLAWQAEARKVHYDPEPYALDLERKPWAL CCCCHHHHHHHHHCCCCEEEEECCCCEECCCCCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA