| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is maoC [H]
Identifier: 99080278
GI number: 99080278
Start: 453126
End: 455156
Strand: Reverse
Name: maoC [H]
Synonym: TM1040_0437
Alternate gene names: 99080278
Gene position: 455156-453126 (Counterclockwise)
Preceding gene: 99080284
Following gene: 99080277
Centisome position: 14.22
GC content: 63.02
Gene sequence:
>2031_bases ATGTGCCCGAAAGATGTGGCGAGCTTTGCCGCCGGAGAATGGATCGCACCGGACCACAGCGCACGCGAGATTGCCTCTGC CATCACCGGAGAGGTGATTGCGCGCGCGGGCAATGCCACGCTCGATGTGCAAGCGATGCTCGATCATGCCCGCGATACGG GCGGCCCCGCCCTGCGCGCCATGACCTTCCATGACCGCGCCCGCATGCTCAAGGCGCTGGCGCAGCATTTGGACGCCCAC AAACAAGAGCTCTACGACCAGAGCTTTGACACCGGCGCGACCCAGAAGGACCACCTGATCGACGTGGACGGCGGCATCGG CACGGTGTTTGTCTTTGCCTCCAAGGGGCGACGCGAAATGCCCGACAGCACGGTCTATACAGACGGCGCGGTCGAGCAAC TGTCGCGCCACGGCAGCTTTATGGGCCAGCACATCTGCACCTCGCTGCCCGGTGTTGCGGTACATATCAACGCCTTCAAC TTCCCGGTCTGGGGCATGCTGGAAAAGCTCGCACCCACCCTGCTCGCCGGTGTTCCGGCCATTGTAAAACCAGCCACCGC CACCTGCTACGTCACCGAGGCCGCCGTGCGCCTAATGCTCGACAGCGGTCTTCTGCCCGAAGGGGCGTTGCAACTGGTAA GTGGCGGACTTGGCGACATGCTGGACCGGCTGACCTGTCAGGACGTGGTGAGCTTTACCGGCTCTGCCGCAACCGCGCTC AAACTGCGCCAGACCCCCGCGATTGTTGAAAACTCCGTGCGGTTTGTAGCGGAACAAGACAGCCTCAACGCGTCGATCCT CGGCCCCGACGCAGCACCCGGTAGCGCGGAGTTTGATCTCTTCCTCAAGGAAGTACAGCGTGAGATGACCACCAAAGCGG GTCAGAAGTGTACTGCGATCCGCCGCATCATCGTGCCCGACGCACAGGTAAACGCTGTGATCGATGGGCTGAGCGCCGCG CTTGCCAAGATCACCATTGGTGACCCACGCGCCGACAGCACCCGTATGGGCGCGCTGGTCTCCGCCGCGCAAAAACGCGA TGTGCTGGAGCAAGCCGACAAAATCGCAACCGAGGCCACCCGCGTCTTTGGCGACCCCGACAATTTCACCGTTGAGGGCG CTGACAAAGACAAAGGCGCCTTCGTGCCGCCCATGCTGTTCCACTGTGCCGACCCGGACGCCGCGCGACATGTGCACGAC ACCGAAGCCTTTGGCCCTGTCTCTACCGTCATGGGCTATCGCGACCTTTCTCATGCGTCCGAACTCGCCAATCGCGGCCA AGGCTCCCTCGTGGCGTCCCTGATCACCGCAGACCCGGTGGTCGCACGCGAGGTCACGCTAAACATCGCGGCCTTCCATG GACGCGTCTATATCAACAATGCCACCTCCATGAAGGAATCCACGGGCCACGGCTCTCCCCTGCCCCATATGGTGCATGGC GGCCCCGGTCGCGCCGGCGGCGGCGAGGAGCTGGGCGGCGTGCGTGCGGTGAAACACTACATGCAGCGCACTGCGGTACA GGGTTCGCCCGAGATTCTGTCGGCGATCACCGGCAAATGGGTGCCCGGCGGCCCCGAAACCACAGGGCCCGCACATCCCT TCACGCGCCGCTTTGGCGCACTCACGATTGGGGAAACACTGCACACCGCGCCGCGTGTCGTCACCAGCGATGACGTCGCC CATTTTGCGCAGTTCACCGGCGACACCTTCTATGCCCACATGGACGATGCCGCCGCAGAGCGAAACCCGTTCTTTCCCGG CCGCGTTGCTCATGGCTACCTGCTCCTGTCCTTTGCAGCGGGCATGTTCGTAGAGCCGAATGAGGGCCCCGTGCTCGCCA ATACCGGACTTGATAACCTGCGCTTCATGAAGCCGGTGGTGCCTGGCGACAGCATCAAGGTGCGCCTGACCGTCAAAGCC AAGACCCCGCGAAACGAAGAATATGGCGAGGTCCGCTGGCATGTGACCCTCACCAATCAAGATGATGAGCTGGTGGCGGA ATACGACCTGCTGACCATGGTGGCGTTCTGA
Upstream 100 bases:
>100_bases ACCGACCGGACGGTCAATATATTCAATCAGGAAAATGAGCCGCCCCGAACTCGGGCGCTGGCACTGCATTTGCACAACAG GCTTCAGGGAGACACGAGAC
Downstream 100 bases:
>100_bases ACCCACCTCAGCCTCGATGATGTCACGTCATGGCAGTTGGGCTGGCGCTAACCCGCGCCAGCCCTTATCGTATCTGCATG ACACAACACACCGACGACTG
Product: bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase
Products: NA
Alternate protein names: Phenylacetic acid degradation protein paaZ [H]
Number of amino acids: Translated: 676; Mature: 676
Protein sequence:
>676_residues MCPKDVASFAAGEWIAPDHSAREIASAITGEVIARAGNATLDVQAMLDHARDTGGPALRAMTFHDRARMLKALAQHLDAH KQELYDQSFDTGATQKDHLIDVDGGIGTVFVFASKGRREMPDSTVYTDGAVEQLSRHGSFMGQHICTSLPGVAVHINAFN FPVWGMLEKLAPTLLAGVPAIVKPATATCYVTEAAVRLMLDSGLLPEGALQLVSGGLGDMLDRLTCQDVVSFTGSAATAL KLRQTPAIVENSVRFVAEQDSLNASILGPDAAPGSAEFDLFLKEVQREMTTKAGQKCTAIRRIIVPDAQVNAVIDGLSAA LAKITIGDPRADSTRMGALVSAAQKRDVLEQADKIATEATRVFGDPDNFTVEGADKDKGAFVPPMLFHCADPDAARHVHD TEAFGPVSTVMGYRDLSHASELANRGQGSLVASLITADPVVAREVTLNIAAFHGRVYINNATSMKESTGHGSPLPHMVHG GPGRAGGGEELGGVRAVKHYMQRTAVQGSPEILSAITGKWVPGGPETTGPAHPFTRRFGALTIGETLHTAPRVVTSDDVA HFAQFTGDTFYAHMDDAAAERNPFFPGRVAHGYLLLSFAAGMFVEPNEGPVLANTGLDNLRFMKPVVPGDSIKVRLTVKA KTPRNEEYGEVRWHVTLTNQDDELVAEYDLLTMVAF
Sequences:
>Translated_676_residues MCPKDVASFAAGEWIAPDHSAREIASAITGEVIARAGNATLDVQAMLDHARDTGGPALRAMTFHDRARMLKALAQHLDAH KQELYDQSFDTGATQKDHLIDVDGGIGTVFVFASKGRREMPDSTVYTDGAVEQLSRHGSFMGQHICTSLPGVAVHINAFN FPVWGMLEKLAPTLLAGVPAIVKPATATCYVTEAAVRLMLDSGLLPEGALQLVSGGLGDMLDRLTCQDVVSFTGSAATAL KLRQTPAIVENSVRFVAEQDSLNASILGPDAAPGSAEFDLFLKEVQREMTTKAGQKCTAIRRIIVPDAQVNAVIDGLSAA LAKITIGDPRADSTRMGALVSAAQKRDVLEQADKIATEATRVFGDPDNFTVEGADKDKGAFVPPMLFHCADPDAARHVHD TEAFGPVSTVMGYRDLSHASELANRGQGSLVASLITADPVVAREVTLNIAAFHGRVYINNATSMKESTGHGSPLPHMVHG GPGRAGGGEELGGVRAVKHYMQRTAVQGSPEILSAITGKWVPGGPETTGPAHPFTRRFGALTIGETLHTAPRVVTSDDVA HFAQFTGDTFYAHMDDAAAERNPFFPGRVAHGYLLLSFAAGMFVEPNEGPVLANTGLDNLRFMKPVVPGDSIKVRLTVKA KTPRNEEYGEVRWHVTLTNQDDELVAEYDLLTMVAF >Mature_676_residues MCPKDVASFAAGEWIAPDHSAREIASAITGEVIARAGNATLDVQAMLDHARDTGGPALRAMTFHDRARMLKALAQHLDAH KQELYDQSFDTGATQKDHLIDVDGGIGTVFVFASKGRREMPDSTVYTDGAVEQLSRHGSFMGQHICTSLPGVAVHINAFN FPVWGMLEKLAPTLLAGVPAIVKPATATCYVTEAAVRLMLDSGLLPEGALQLVSGGLGDMLDRLTCQDVVSFTGSAATAL KLRQTPAIVENSVRFVAEQDSLNASILGPDAAPGSAEFDLFLKEVQREMTTKAGQKCTAIRRIIVPDAQVNAVIDGLSAA LAKITIGDPRADSTRMGALVSAAQKRDVLEQADKIATEATRVFGDPDNFTVEGADKDKGAFVPPMLFHCADPDAARHVHD TEAFGPVSTVMGYRDLSHASELANRGQGSLVASLITADPVVAREVTLNIAAFHGRVYINNATSMKESTGHGSPLPHMVHG GPGRAGGGEELGGVRAVKHYMQRTAVQGSPEILSAITGKWVPGGPETTGPAHPFTRRFGALTIGETLHTAPRVVTSDDVA HFAQFTGDTFYAHMDDAAAERNPFFPGRVAHGYLLLSFAAGMFVEPNEGPVLANTGLDNLRFMKPVVPGDSIKVRLTVKA KTPRNEEYGEVRWHVTLTNQDDELVAEYDLLTMVAF
Specific function: Phenylacetic acid aerobic catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldehyde dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI153266822, Length=443, Percent_Identity=24.8306997742664, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI25777724, Length=497, Percent_Identity=24.3460764587525, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI12007648, Length=424, Percent_Identity=25, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI25777728, Length=440, Percent_Identity=24.3181818181818, Blast_Score=87, Evalue=5e-17, Organism=Homo sapiens, GI25777730, Length=478, Percent_Identity=24.6861924686192, Blast_Score=86, Evalue=2e-16, Organism=Homo sapiens, GI21361176, Length=443, Percent_Identity=24.1534988713318, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI25777732, Length=477, Percent_Identity=24.7379454926625, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI115387104, Length=363, Percent_Identity=26.4462809917355, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI238814322, Length=453, Percent_Identity=23.6203090507726, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI188035924, Length=357, Percent_Identity=25.7703081232493, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI310128103, Length=357, Percent_Identity=25.7703081232493, Blast_Score=70, Evalue=6e-12, Organism=Escherichia coli, GI1787653, Length=679, Percent_Identity=52.1354933726068, Blast_Score=640, Evalue=0.0, Organism=Escherichia coli, GI87082295, Length=507, Percent_Identity=26.0355029585799, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1789015, Length=484, Percent_Identity=24.5867768595041, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1787684, Length=346, Percent_Identity=27.1676300578035, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI87081896, Length=359, Percent_Identity=26.4623955431755, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI1786504, Length=460, Percent_Identity=26.5217391304348, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI87081926, Length=343, Percent_Identity=22.7405247813411, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787558, Length=406, Percent_Identity=26.8472906403941, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1787715, Length=344, Percent_Identity=27.3255813953488, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788042, Length=442, Percent_Identity=25.5656108597285, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787250, Length=353, Percent_Identity=25.2124645892351, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI25143874, Length=512, Percent_Identity=25.5859375, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI25143876, Length=512, Percent_Identity=25.5859375, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17562198, Length=480, Percent_Identity=23.75, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115532534, Length=371, Percent_Identity=25.6064690026954, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI133930964, Length=459, Percent_Identity=22.8758169934641, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17534447, Length=359, Percent_Identity=25.6267409470752, Blast_Score=70, Evalue=3e-12, Organism=Caenorhabditis elegans, GI32564151, Length=277, Percent_Identity=27.0758122743682, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71986308, Length=443, Percent_Identity=23.9277652370203, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320917, Length=362, Percent_Identity=27.0718232044199, Blast_Score=100, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6324950, Length=449, Percent_Identity=25.1670378619154, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323822, Length=363, Percent_Identity=25.8953168044077, Blast_Score=75, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6325196, Length=436, Percent_Identity=23.8532110091743, Blast_Score=74, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6323821, Length=367, Percent_Identity=25.0681198910082, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI20129399, Length=526, Percent_Identity=25.6653992395437, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI281362580, Length=430, Percent_Identity=25.5813953488372, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI62472918, Length=430, Percent_Identity=25.5813953488372, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI62472926, Length=430, Percent_Identity=25.5813953488372, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI62472936, Length=430, Percent_Identity=25.5813953488372, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356737, Length=430, Percent_Identity=25.5813953488372, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24650465, Length=446, Percent_Identity=23.7668161434978, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR002539 - InterPro: IPR011966 [H]
Pfam domain/function: PF00171 Aldedh; PF01575 MaoC_dehydratas [H]
EC number: NA
Molecular weight: Translated: 72098; Mature: 72098
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCPKDVASFAAGEWIAPDHSAREIASAITGEVIARAGNATLDVQAMLDHARDTGGPALRA CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCEEEE MTFHDRARMLKALAQHLDAHKQELYDQSFDTGATQKDHLIDVDGGIGTVFVFASKGRREM EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCC PDSTVYTDGAVEQLSRHGSFMGQHICTSLPGVAVHINAFNFPVWGMLEKLAPTLLAGVPA CCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCH IVKPATATCYVTEAAVRLMLDSGLLPEGALQLVSGGLGDMLDRLTCQDVVSFTGSAATAL HHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHEE KLRQTPAIVENSVRFVAEQDSLNASILGPDAAPGSAEFDLFLKEVQREMTTKAGQKCTAI EECCCCHHHHCCHHEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RRIIVPDAQVNAVIDGLSAALAKITIGDPRADSTRMGALVSAAQKRDVLEQADKIATEAT HHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFGDPDNFTVEGADKDKGAFVPPMLFHCADPDAARHVHDTEAFGPVSTVMGYRDLSHAS HHCCCCCCEEEECCCCCCCCCCCCHHEECCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHH ELANRGQGSLVASLITADPVVAREVTLNIAAFHGRVYINNATSMKESTGHGSPLPHMVHG HHHHCCCCHHHHHHHHCCCCEEHEEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCC GPGRAGGGEELGGVRAVKHYMQRTAVQGSPEILSAITGKWVPGGPETTGPAHPFTRRFGA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC LTIGETLHTAPRVVTSDDVAHFAQFTGDTFYAHMDDAAAERNPFFPGRVAHGYLLLSFAA EEECHHHHCCCCEECCHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHC GMFVEPNEGPVLANTGLDNLRFMKPVVPGDSIKVRLTVKAKTPRNEEYGEVRWHVTLTNQ CCEECCCCCCEEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECC DDELVAEYDLLTMVAF CCHHHHHHHHHHHHCC >Mature Secondary Structure MCPKDVASFAAGEWIAPDHSAREIASAITGEVIARAGNATLDVQAMLDHARDTGGPALRA CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCEEEE MTFHDRARMLKALAQHLDAHKQELYDQSFDTGATQKDHLIDVDGGIGTVFVFASKGRREM EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCC PDSTVYTDGAVEQLSRHGSFMGQHICTSLPGVAVHINAFNFPVWGMLEKLAPTLLAGVPA CCCCEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCH IVKPATATCYVTEAAVRLMLDSGLLPEGALQLVSGGLGDMLDRLTCQDVVSFTGSAATAL HHCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHEE KLRQTPAIVENSVRFVAEQDSLNASILGPDAAPGSAEFDLFLKEVQREMTTKAGQKCTAI EECCCCHHHHCCHHEEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHH RRIIVPDAQVNAVIDGLSAALAKITIGDPRADSTRMGALVSAAQKRDVLEQADKIATEAT HHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RVFGDPDNFTVEGADKDKGAFVPPMLFHCADPDAARHVHDTEAFGPVSTVMGYRDLSHAS HHCCCCCCEEEECCCCCCCCCCCCHHEECCCCHHHHHCCCCHHCCCHHHHHHHHHHHHHH ELANRGQGSLVASLITADPVVAREVTLNIAAFHGRVYINNATSMKESTGHGSPLPHMVHG HHHHCCCCHHHHHHHHCCCCEEHEEEEEEEEEECEEEECCCCCCCCCCCCCCCCCCCCCC GPGRAGGGEELGGVRAVKHYMQRTAVQGSPEILSAITGKWVPGGPETTGPAHPFTRRFGA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCC LTIGETLHTAPRVVTSDDVAHFAQFTGDTFYAHMDDAAAERNPFFPGRVAHGYLLLSFAA EEECHHHHCCCCEECCHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHHHHHHHHHC GMFVEPNEGPVLANTGLDNLRFMKPVVPGDSIKVRLTVKAKTPRNEEYGEVRWHVTLTNQ CCEECCCCCCEEEECCCCCCHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECC DDELVAEYDLLTMVAF CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]