Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080265

Identifier: 99080265

GI number: 99080265

Start: 435852

End: 437273

Strand: Direct

Name: 99080265

Synonym: TM1040_0424

Alternate gene names: NA

Gene position: 435852-437273 (Clockwise)

Preceding gene: 99080264

Following gene: 99080266

Centisome position: 13.62

GC content: 62.45

Gene sequence:

>1422_bases
ATGACTGTTGAATTCGACGCGGCGCGCCTTGGTCCCATCCTGTACTACCGAGGTCTGGAGGGCGACGCGCTGCAGCTGGC
GGCGATGGTCATGCTACCGATTGGAGAGCGCCCCGAAACTCTGCGTACGGATGCGGGGGACCACGCGCCGACGCTCTTGC
GCGAGATTGGTCGCAGCGCGGTTTGGCGGTATGATTTCGGTCTGACGCCCAGCTGCGGCAGCTATCGCCTTGGGGATCAG
AGCTACGACGTGCAGACTGATCTTCATGGCGATATGCGCATTGCCTTTGCGTCTTGTAATGGCGAGGAAAAAGGTGATCT
CGACCGGGATCAGGAAGAGCGCAACCGCATGTGGGCGCATATGTGTGCCGAACACCGCCGTGCGCCTTTTGCGCTGTTGT
TGCAAGGGGGCGACCAGATCTATGCGGATGAGGCGACAGAGGGCCATCCCCTGAGCGAAGACTGGCCGGACAAGGCCGGG
CGTCCGCGCAACGCAGAAGAGCTGAAAGACCTGGCCGATCATCTCAGGCTGCGGTTTGCGGAGCGGTATGTGCAGGCGCT
CTTTGGCGAGGCGCCAAGCTGGATCATGGCGCGGGTGCCGACACTGGCGATCTGGGACGATCATGACATCTGCGATGGCT
GGGGTTCACTCTACCGCAGCAAGACCCACTCCGAGGTGGGGCAGTGTCTCTATGCCGTGGCGCGTGAAATGTATCTCTTG
TTTCAGCACGCCGCCGTGGAAGGCGACATTCCGGATCTCTTTATGGACGAGACGGGCACCTCGCTGTCATGGCAGCGCGC
CTTGCCGGGGGTGAAGCTGCTGGCGCCGGATCTGCGCGCCGAGCGCGGCCGCCGTCAGGTTCTGGGCGCCTACGGGTGGT
CTGCGGTCGAGGCGATGAAGCCGGGATCGGAACATACTTTTGTGATTTCCAGCGTACCGCTCCTGGGGCCGCGGTTGTCA
TTGGTGGAGGGGCTCATGCTGATGATCCCGACCATGCAGAAATACGAGGACGATCTGCGCGATCAGTGGCAAAGCCGCGC
GCACCGCAAGGAATGGATACGCATGCTCAAGCAGGTCATTGCATGGCGCGAGGAGGCGCCGGTGACGATCCTGTCTGGCG
AGATCCACCTCGCCACGCGCGCCGAAATGGGTCCTGACGAGACGCGCGTGCATCAGCTTGTGGCCTCGGGCATTGCCCAC
CGTGCGCCGCCGCAGAGCTATGCCCGAAGTCTGGGCACTTTGGCGGGACTCGGTGATGCGCCTGTGAGCGGGCATCCGAT
CCGTATTCATCCGCTTCCGGGTCAAAGCCAACGCTATACGGCGGAGCGCAACTATCTTGAGCTCAGGCGCACGCATGGAA
AATGGCACGCGGTCTGGCACCTCGAAGAGAGCGGGGACACAGTCCCGATGGTTCTGGAGTAA

Upstream 100 bases:

>100_bases
ACCCCCCCTCGGGGCGCCGGGGATTGGCGCGGGTTACATCGCCGCACTCCATACCCTATCTCTGCACTGAAGGACGGCAC
GGATCTGAAATGAGGGACAC

Downstream 100 bases:

>100_bases
CAGCAGCGGGCGGGTCGAGATCTTCACCTTTGATAAATTTTTCTGAACTTTTCCTTTCTTTTCAGGCCGTATCGTGGGGT
CTGACAGGGAGACATTAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MTVEFDAARLGPILYYRGLEGDALQLAAMVMLPIGERPETLRTDAGDHAPTLLREIGRSAVWRYDFGLTPSCGSYRLGDQ
SYDVQTDLHGDMRIAFASCNGEEKGDLDRDQEERNRMWAHMCAEHRRAPFALLLQGGDQIYADEATEGHPLSEDWPDKAG
RPRNAEELKDLADHLRLRFAERYVQALFGEAPSWIMARVPTLAIWDDHDICDGWGSLYRSKTHSEVGQCLYAVAREMYLL
FQHAAVEGDIPDLFMDETGTSLSWQRALPGVKLLAPDLRAERGRRQVLGAYGWSAVEAMKPGSEHTFVISSVPLLGPRLS
LVEGLMLMIPTMQKYEDDLRDQWQSRAHRKEWIRMLKQVIAWREEAPVTILSGEIHLATRAEMGPDETRVHQLVASGIAH
RAPPQSYARSLGTLAGLGDAPVSGHPIRIHPLPGQSQRYTAERNYLELRRTHGKWHAVWHLEESGDTVPMVLE

Sequences:

>Translated_473_residues
MTVEFDAARLGPILYYRGLEGDALQLAAMVMLPIGERPETLRTDAGDHAPTLLREIGRSAVWRYDFGLTPSCGSYRLGDQ
SYDVQTDLHGDMRIAFASCNGEEKGDLDRDQEERNRMWAHMCAEHRRAPFALLLQGGDQIYADEATEGHPLSEDWPDKAG
RPRNAEELKDLADHLRLRFAERYVQALFGEAPSWIMARVPTLAIWDDHDICDGWGSLYRSKTHSEVGQCLYAVAREMYLL
FQHAAVEGDIPDLFMDETGTSLSWQRALPGVKLLAPDLRAERGRRQVLGAYGWSAVEAMKPGSEHTFVISSVPLLGPRLS
LVEGLMLMIPTMQKYEDDLRDQWQSRAHRKEWIRMLKQVIAWREEAPVTILSGEIHLATRAEMGPDETRVHQLVASGIAH
RAPPQSYARSLGTLAGLGDAPVSGHPIRIHPLPGQSQRYTAERNYLELRRTHGKWHAVWHLEESGDTVPMVLE
>Mature_472_residues
TVEFDAARLGPILYYRGLEGDALQLAAMVMLPIGERPETLRTDAGDHAPTLLREIGRSAVWRYDFGLTPSCGSYRLGDQS
YDVQTDLHGDMRIAFASCNGEEKGDLDRDQEERNRMWAHMCAEHRRAPFALLLQGGDQIYADEATEGHPLSEDWPDKAGR
PRNAEELKDLADHLRLRFAERYVQALFGEAPSWIMARVPTLAIWDDHDICDGWGSLYRSKTHSEVGQCLYAVAREMYLLF
QHAAVEGDIPDLFMDETGTSLSWQRALPGVKLLAPDLRAERGRRQVLGAYGWSAVEAMKPGSEHTFVISSVPLLGPRLSL
VEGLMLMIPTMQKYEDDLRDQWQSRAHRKEWIRMLKQVIAWREEAPVTILSGEIHLATRAEMGPDETRVHQLVASGIAHR
APPQSYARSLGTLAGLGDAPVSGHPIRIHPLPGQSQRYTAERNYLELRRTHGKWHAVWHLEESGDTVPMVLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321705, Length=405, Percent_Identity=24.4444444444444, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53326; Mature: 53195

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEFDAARLGPILYYRGLEGDALQLAAMVMLPIGERPETLRTDAGDHAPTLLREIGRSA
CCEECCHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHCHHH
VWRYDFGLTPSCGSYRLGDQSYDVQTDLHGDMRIAFASCNGEEKGDLDRDQEERNRMWAH
EEEECCCCCCCCCCEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
MCAEHRRAPFALLLQGGDQIYADEATEGHPLSEDWPDKAGRPRNAEELKDLADHLRLRFA
HHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERYVQALFGEAPSWIMARVPTLAIWDDHDICDGWGSLYRSKTHSEVGQCLYAVAREMYLL
HHHHHHHHCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQHAAVEGDIPDLFMDETGTSLSWQRALPGVKLLAPDLRAERGRRQVLGAYGWSAVEAMK
HHHHHCCCCCCCHHHCCCCCCCCHHHCCCCCEEECCHHHHHCCHHHHHHHCCHHHHHHCC
PGSEHTFVISSVPLLGPRLSLVEGLMLMIPTMQKYEDDLRDQWQSRAHRKEWIRMLKQVI
CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWREEAPVTILSGEIHLATRAEMGPDETRVHQLVASGIAHRAPPQSYARSLGTLAGLGDA
HHCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PVSGHPIRIHPLPGQSQRYTAERNYLELRRTHGKWHAVWHLEESGDTVPMVLE
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEC
>Mature Secondary Structure 
TVEFDAARLGPILYYRGLEGDALQLAAMVMLPIGERPETLRTDAGDHAPTLLREIGRSA
CEECCHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHCHHH
VWRYDFGLTPSCGSYRLGDQSYDVQTDLHGDMRIAFASCNGEEKGDLDRDQEERNRMWAH
EEEECCCCCCCCCCEECCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHH
MCAEHRRAPFALLLQGGDQIYADEATEGHPLSEDWPDKAGRPRNAEELKDLADHLRLRFA
HHHHHCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
ERYVQALFGEAPSWIMARVPTLAIWDDHDICDGWGSLYRSKTHSEVGQCLYAVAREMYLL
HHHHHHHHCCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FQHAAVEGDIPDLFMDETGTSLSWQRALPGVKLLAPDLRAERGRRQVLGAYGWSAVEAMK
HHHHHCCCCCCCHHHCCCCCCCCHHHCCCCCEEECCHHHHHCCHHHHHHHCCHHHHHHCC
PGSEHTFVISSVPLLGPRLSLVEGLMLMIPTMQKYEDDLRDQWQSRAHRKEWIRMLKQVI
CCCCCEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWREEAPVTILSGEIHLATRAEMGPDETRVHQLVASGIAHRAPPQSYARSLGTLAGLGDA
HHCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
PVSGHPIRIHPLPGQSQRYTAERNYLELRRTHGKWHAVWHLEESGDTVPMVLE
CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA