| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080241
Identifier: 99080241
GI number: 99080241
Start: 408384
End: 408572
Strand: Direct
Name: 99080241
Synonym: TM1040_0400
Alternate gene names: NA
Gene position: 408384-408572 (Clockwise)
Preceding gene: 99080240
Following gene: 99080242
Centisome position: 12.76
GC content: 62.96
Gene sequence:
>189_bases ATGTCACGGAAAGAGGATGGCGCAAGCCGCCGCGACTTTCTGAAACTGGCTGCAACCACCACGCCCGCTGCGGTAGTGGC GCTTGCAACCACCGGAGGCGAGGCGGAGGCCGCGACCCCGGACCTGTCATCAAGCAAGATGCAGGATACCGCGCATACGC GCGCTTATTACGACAGCACCCGGTTCTGA
Upstream 100 bases:
>100_bases CAATCCAAAACGGCGCGCCTGCAGGGGGCAGGTGCAGGGTGGGGCGGCCCGGACGCCCGAATGACTGGACCCAAGACGAC CCAAAAGGAGGAGGATCCAC
Downstream 100 bases:
>100_bases TCGGTTGCTTTTCGTGCCTTGGCCGACTGGTTGCGTGACGCCCGACCGAGCGAAGGTTTCTCATTGAACCCAGCGCGCTT CTGATTTCAGGGGCAAGCAA
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MSRKEDGASRRDFLKLAATTTPAAVVALATTGGEAEAATPDLSSSKMQDTAHTRAYYDSTRF
Sequences:
>Translated_62_residues MSRKEDGASRRDFLKLAATTTPAAVVALATTGGEAEAATPDLSSSKMQDTAHTRAYYDSTRF >Mature_61_residues SRKEDGASRRDFLKLAATTTPAAVVALATTGGEAEAATPDLSSSKMQDTAHTRAYYDSTRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6596; Mature: 6465
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKEDGASRRDFLKLAATTTPAAVVALATTGGEAEAATPDLSSSKMQDTAHTRAYYDST CCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC RF CC >Mature Secondary Structure SRKEDGASRRDFLKLAATTTPAAVVALATTGGEAEAATPDLSSSKMQDTAHTRAYYDST CCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC RF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA