Click here to switch to the map view.

The map label for this gene is 99080240

Identifier: 99080240

GI number: 99080240

Start: 407651

End: 408277

Strand: Direct

Name: 99080240

Synonym: TM1040_0399

Alternate gene names: NA

Gene position: 407651-408277 (Clockwise)

Preceding gene: 99080239

Following gene: 99080241

Centisome position: 12.74

GC content: 59.81

Gene sequence:

>627_bases
ATGACACAGGAGAGCCCGATGACTGAGGCAGCCGTGACTGCAGAGACGGTCACTGAAGAGGACCGTCTGCGCGCGGATCT
TTACAACTATCTCGGCCTGATGCTTGCGGCCCCGCCGGCAGAGATGCTGCTGGAACAGACTGCTGGGCTCTCTGGGGACG
ATACCCCCTTGGGGGAGGCGATCACCCAATTGGCCCGGGTGGCCAAACGCACCAAACCCGCCGCGGCTGAACGCGAGTTC
AACGCGCTGTTCATCGGTTTGGGTCGTGGCGAGCTCTTGCCTTACGCAAGCTACTATCTGACGGGTTTTCTCAACGAAAA
ACCTCTGGCGGCGTTGCGCAACGACATGAGCGCTCGCGGCTTGAGCCGCGCGCCGAACGTATTCGAGCCCGAAGACAATA
TCGCATCGCTCATGGAGATGATGGGGGCGATGATCGTGGGGCGGTTCAACACTCCGGTCTCGTTGGCGGAACAAAAAACC
TTTTTCAACAAGCACATCGGCCCGTGGGCTGCGCATTTCTTTGCGGATCTCGAAGGAGCGAAAAACTCTGTGCTTTATGC
CTCGGTGGGCGCGGTGGGTCGCGCCTTCATGGAGATCGAGGCCGAAGGATTTCGGATGGGGGGCTGA

Upstream 100 bases:

>100_bases
CGCATGCGAGTGCTGCAGGCGGGGATCACGAAGAAGAGGCCGTGGCGCCCGTCACATCGCGCCGCATGCGCTTTGTGTTC
GAGGACGGGGCGGCCAGCAC

Downstream 100 bases:

>100_bases
GGCCCGCAATCCAAAACGGCGCGCCTGCAGGGGGCAGGTGCAGGGTGGGGCGGCCCGGACGCCCGAATGACTGGACCCAA
GACGACCCAAAAGGAGGAGG

Product: cytoplasmic chaperone TorD

Products: NA

Alternate protein names: Cytoplasmic Chaperone rD; Chaperone rD Family; Chaperone; RD Family Cytoplasmic Chaperone; RA Specific Chaperone; Cytoplasmic Chaperone rD Subfamily; Formate Dehydrogenase-Specific Chaperone; Chaperone Protein rD; Chaperone rD; Chaperone Protein rD Family; Cytoplasmic Chaperone rd Family Protein

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTQESPMTEAAVTAETVTEEDRLRADLYNYLGLMLAAPPAEMLLEQTAGLSGDDTPLGEAITQLARVAKRTKPAAAEREF
NALFIGLGRGELLPYASYYLTGFLNEKPLAALRNDMSARGLSRAPNVFEPEDNIASLMEMMGAMIVGRFNTPVSLAEQKT
FFNKHIGPWAAHFFADLEGAKNSVLYASVGAVGRAFMEIEAEGFRMGG

Sequences:

>Translated_208_residues
MTQESPMTEAAVTAETVTEEDRLRADLYNYLGLMLAAPPAEMLLEQTAGLSGDDTPLGEAITQLARVAKRTKPAAAEREF
NALFIGLGRGELLPYASYYLTGFLNEKPLAALRNDMSARGLSRAPNVFEPEDNIASLMEMMGAMIVGRFNTPVSLAEQKT
FFNKHIGPWAAHFFADLEGAKNSVLYASVGAVGRAFMEIEAEGFRMGG
>Mature_207_residues
TQESPMTEAAVTAETVTEEDRLRADLYNYLGLMLAAPPAEMLLEQTAGLSGDDTPLGEAITQLARVAKRTKPAAAEREFN
ALFIGLGRGELLPYASYYLTGFLNEKPLAALRNDMSARGLSRAPNVFEPEDNIASLMEMMGAMIVGRFNTPVSLAEQKTF
FNKHIGPWAAHFFADLEGAKNSVLYASVGAVGRAFMEIEAEGFRMGG

Specific function: Unknown

COG id: COG3381

COG function: function code R; Uncharacterized component of anaerobic dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22560; Mature: 22429

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQESPMTEAAVTAETVTEEDRLRADLYNYLGLMLAAPPAEMLLEQTAGLSGDDTPLGEA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHH
ITQLARVAKRTKPAAAEREFNALFIGLGRGELLPYASYYLTGFLNEKPLAALRNDMSARG
HHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
LSRAPNVFEPEDNIASLMEMMGAMIVGRFNTPVSLAEQKTFFNKHIGPWAAHFFADLEGA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
KNSVLYASVGAVGRAFMEIEAEGFRMGG
CCCEEEEHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure 
TQESPMTEAAVTAETVTEEDRLRADLYNYLGLMLAAPPAEMLLEQTAGLSGDDTPLGEA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHH
ITQLARVAKRTKPAAAEREFNALFIGLGRGELLPYASYYLTGFLNEKPLAALRNDMSARG
HHHHHHHHHHCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
LSRAPNVFEPEDNIASLMEMMGAMIVGRFNTPVSLAEQKTFFNKHIGPWAAHFFADLEGA
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCC
KNSVLYASVGAVGRAFMEIEAEGFRMGG
CCCEEEEHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA