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The map label for this gene is nagC [C]

Identifier: 99080208

GI number: 99080208

Start: 376581

End: 377822

Strand: Reverse

Name: nagC [C]

Synonym: TM1040_0367

Alternate gene names: 99080208

Gene position: 377822-376581 (Counterclockwise)

Preceding gene: 99080214

Following gene: 99080207

Centisome position: 11.8

GC content: 62.08

Gene sequence:

>1242_bases
ATGCAGGCTCTTGCCTCAAATGCAGGAGGAGCGCATAGACCAGTCATGCCAGATCCACGCCCCTACTCCACCGGCGCAAG
CCAGAGTGAGCTTCGTGCTTACAATGAACGCCTGTTGCTCACGCTCTTGCACCAAGGTGGCGCCCTACCCGGCAGTGAAA
TGGCACGGCGCACCGGGCTGTCGTCCCAGACCGTCTCGGTGATCCTGCGCAAGCTCGAACAGGACGGTCTGGTACTGCGC
GGCGAGAGCCAGAAAGGCCGCGTGGGCAAGCCTTCGGTCCCGATGGGCATCAATCCCGAGGGCCTGTTTTCCTTTGGTGT
CAAGATTGGCCGGCGCAGTACGGATTTGGTGCTCACAGACTTTCGAGGCGGGCTGCGCGCCGAGCGGCAACTGCGATACG
CCTATCCGCAACCTGACGATGTATTTGAGTTTATCAAAACCGGCATAGAAGACATCAGCGCCGATCTGAGTGCCGAGCAA
CAGGCGCGGATCTGCGGCATCGGCGTTGCGACCCCCTTTGATCTCTGGCGCTGGCATGCACAAGTCGGCGCCCCAAAGTC
CAGCCTCACCGCATGGCGCGCGCTGGATCCGACGATCGAAATTGCCCGCTTCAGCCCCCTGCGGGTCTTTGTCATCAATG
ATGCCACCGCAGCATGCCGAGCCGAGCATATGTTCGGCGCCAGCAGCCGTTGGCGCGACAGCATCTATTTCTTCATCGCG
GCCTTCATTGGCGGTGGCGTGGTGCTCAATCACTCCGTCTATGAAGGCGGCATGGGCAATGCGGGGGCTCTAGGGCCCCT
GCCCTCGCAACGGGCTGATGGCAGCAATTGCCGCCTGCTCGACAGCGCGTCCATCCGCGAGCTCGAGCGGCTTCTGAATG
AGGCCGATATTGATCCACGCGCGCTCTGGGAGCAACCGCAGGATTGGAGTGCCTTTGCCCCGCAGGTGGATCAATGGCTC
GAAGAAACCGCCTGCGCCCTGGCGCGTGCAGCGCTGACCACCTGCGCGGTCATTGATTTTCAGGCTGTTGTGGTAGATGG
GGTACTGCCAAGGTCCATCCGCCAACGCCTGGTCGATCGCATTCGCGAAGAGCTCCCCAAGCTGGATGCCCGCGGCCTGA
TCCTACCCGACGTCCAGGAGGGCCAGATCGGCCCGCATGCCTCGGCCCTTGGAGCGGCCGCCAAACCCCTGATTGCGCAG
TATCTCCTTGATACTCACGCCGGTTTCACTGCCACAAGCTGA

Upstream 100 bases:

>100_bases
CCTCTTCCTCCGTGGGGCTGTTGCGGTCGATGCCTGCATCAAAGCCGTGATTCCGCATCTCTGTCAATAAATAAATAAAG
TTGATTTATTAAAGCGACCC

Downstream 100 bases:

>100_bases
CACCCGCGAACCACACGCAAGCGCCGGACCGTGCCATCCGTTGTGGGGCTTGACGCGCGAGTTGCGCAGCGCTTAAACCA
ATTTCAAATTGGTATTCCCA

Product: ROK domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MQALASNAGGAHRPVMPDPRPYSTGASQSELRAYNERLLLTLLHQGGALPGSEMARRTGLSSQTVSVILRKLEQDGLVLR
GESQKGRVGKPSVPMGINPEGLFSFGVKIGRRSTDLVLTDFRGGLRAERQLRYAYPQPDDVFEFIKTGIEDISADLSAEQ
QARICGIGVATPFDLWRWHAQVGAPKSSLTAWRALDPTIEIARFSPLRVFVINDATAACRAEHMFGASSRWRDSIYFFIA
AFIGGGVVLNHSVYEGGMGNAGALGPLPSQRADGSNCRLLDSASIRELERLLNEADIDPRALWEQPQDWSAFAPQVDQWL
EETACALARAALTTCAVIDFQAVVVDGVLPRSIRQRLVDRIREELPKLDARGLILPDVQEGQIGPHASALGAAAKPLIAQ
YLLDTHAGFTATS

Sequences:

>Translated_413_residues
MQALASNAGGAHRPVMPDPRPYSTGASQSELRAYNERLLLTLLHQGGALPGSEMARRTGLSSQTVSVILRKLEQDGLVLR
GESQKGRVGKPSVPMGINPEGLFSFGVKIGRRSTDLVLTDFRGGLRAERQLRYAYPQPDDVFEFIKTGIEDISADLSAEQ
QARICGIGVATPFDLWRWHAQVGAPKSSLTAWRALDPTIEIARFSPLRVFVINDATAACRAEHMFGASSRWRDSIYFFIA
AFIGGGVVLNHSVYEGGMGNAGALGPLPSQRADGSNCRLLDSASIRELERLLNEADIDPRALWEQPQDWSAFAPQVDQWL
EETACALARAALTTCAVIDFQAVVVDGVLPRSIRQRLVDRIREELPKLDARGLILPDVQEGQIGPHASALGAAAKPLIAQ
YLLDTHAGFTATS
>Mature_413_residues
MQALASNAGGAHRPVMPDPRPYSTGASQSELRAYNERLLLTLLHQGGALPGSEMARRTGLSSQTVSVILRKLEQDGLVLR
GESQKGRVGKPSVPMGINPEGLFSFGVKIGRRSTDLVLTDFRGGLRAERQLRYAYPQPDDVFEFIKTGIEDISADLSAEQ
QARICGIGVATPFDLWRWHAQVGAPKSSLTAWRALDPTIEIARFSPLRVFVINDATAACRAEHMFGASSRWRDSIYFFIA
AFIGGGVVLNHSVYEGGMGNAGALGPLPSQRADGSNCRLLDSASIRELERLLNEADIDPRALWEQPQDWSAFAPQVDQWL
EETACALARAALTTCAVIDFQAVVVDGVLPRSIRQRLVDRIREELPKLDARGLILPDVQEGQIGPHASALGAAAKPLIAQ
YLLDTHAGFTATS

Specific function: Acts As A Repressor Of The Nagebacd Operon And Acts Both As An Activator And A Repressor For The Transcription Of The Glmsu Operon. [C]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 44833; Mature: 44833

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALASNAGGAHRPVMPDPRPYSTGASQSELRAYNERLLLTLLHQGGALPGSEMARRTGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
SSQTVSVILRKLEQDGLVLRGESQKGRVGKPSVPMGINPEGLFSFGVKIGRRSTDLVLTD
CHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC
FRGGLRAERQLRYAYPQPDDVFEFIKTGIEDISADLSAEQQARICGIGVATPFDLWRWHA
CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCHHHHHHHHH
QVGAPKSSLTAWRALDPTIEIARFSPLRVFVINDATAACRAEHMFGASSRWRDSIYFFIA
HHCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHH
AFIGGGVVLNHSVYEGGMGNAGALGPLPSQRADGSNCRLLDSASIRELERLLNEADIDPR
HHHCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHH
ALWEQPQDWSAFAPQVDQWLEETACALARAALTTCAVIDFQAVVVDGVLPRSIRQRLVDR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IREELPKLDARGLILPDVQEGQIGPHASALGAAAKPLIAQYLLDTHAGFTATS
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQALASNAGGAHRPVMPDPRPYSTGASQSELRAYNERLLLTLLHQGGALPGSEMARRTGL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCC
SSQTVSVILRKLEQDGLVLRGESQKGRVGKPSVPMGINPEGLFSFGVKIGRRSTDLVLTD
CHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEC
FRGGLRAERQLRYAYPQPDDVFEFIKTGIEDISADLSAEQQARICGIGVATPFDLWRWHA
CCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHEEEECCCCHHHHHHHHH
QVGAPKSSLTAWRALDPTIEIARFSPLRVFVINDATAACRAEHMFGASSRWRDSIYFFIA
HHCCCHHHHHHHHHCCCCEEEEECCCEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHH
AFIGGGVVLNHSVYEGGMGNAGALGPLPSQRADGSNCRLLDSASIRELERLLNEADIDPR
HHHCCCEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCHH
ALWEQPQDWSAFAPQVDQWLEETACALARAALTTCAVIDFQAVVVDGVLPRSIRQRLVDR
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IREELPKLDARGLILPDVQEGQIGPHASALGAAAKPLIAQYLLDTHAGFTATS
HHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]