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The map label for this gene is 99080169

Identifier: 99080169

GI number: 99080169

Start: 333138

End: 334046

Strand: Direct

Name: 99080169

Synonym: TM1040_0328

Alternate gene names: NA

Gene position: 333138-334046 (Clockwise)

Preceding gene: 99080168

Following gene: 99080170

Centisome position: 10.41

GC content: 62.71

Gene sequence:

>909_bases
ATGATCCGCAATCCGATAAAATGGCCCAATGGCGCCCGCTGCGCCTGTGCGATCACGTTTGATGTCGATGCCGACAGCCT
GATCCATATCGCCCGTCCCGAAGACGCGCACCGCCGCCTCTATCCGATCAGCATGGGCCGCTATGGCCCCAATTCCGGCG
TGCCGCGCATCCTGGACACCTATCGACGGCTTGGGCTCAAGCAGTCCTTCTTCATGCCCGGCTGGGTGATGGAGCGCTAT
CCCGAAACGGTTGAGGCGATCCTCGCCGGGGGCCATGAGATCGGTCATCACGGTTATCTGCACGAAGACCCCGCCGAGCA
GAACGCCGAAGACCAGACCTATTGGTTCGAGCGCGCGCTGGAGGTGCACCGGCGCCTCACCGGTCGCACGCCGCGCGGCT
ACCGCGCCCCGGTCTATAACGTCACGCCCGAGGTGCTCTCGCTCGCGGTGCAGCATGGGCTGACCTATGAAAGTTCGATG
ATGGCGGATGATCTGCCCTACCGGATCGACACCCCAACGGGCGCGCTCTACGAGCTGCCGGTGCATTGGGGCAGTGATGA
TTGGCCACCCTTCGCGCATTTCGACGAGATCGGCTATAAGATGCCGGTGATGTCGCCACGTCGCGGGCTTGAGGCCTCTT
TTGAAGAGTTTGAAGCGCAATATGAGGCCGGAGGTCTCTGGATCGGCATCTGGCATCCTTTTCTCACCGGGCGGCTGGCC
CGCTGGCGGGTCGTGGAACGCTGGCTCGAAGCGGTGCTGGCGCGTGGCGATGTCTGGTTCGCACCGCTCGAAGAGATCGC
CGCCTATGCGGCCTCCCAAGAGGCCGAAGGCCTTTGGCAGCCGCATCGCGAACCTGCCGCTCCCTACGCAAATCCCGTTT
TGATGGAGAAAACGCATGACCAGTTTTGA

Upstream 100 bases:

>100_bases
GGGTGGGCCTGCAGCTGGTCGGGCCGCCACATAGCGACCGTCGTCTGCTCGCGACATCACAAACGGTCGAAAAGCTGTTG
ATGAGAAAGGATAAGCTCAG

Downstream 100 bases:

>100_bases
CCGCCCCTTTGAGGCCGCGCGGCCCGATGGCGAAAACCCAAGCGCCCATGAGACGCTGGCAGAAGGCGGACGACTGCGTC
CCGAGGCGACCTATACCATT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Polysaccharide Deacetylase Domain-Containing Protein; Hydrolase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase; Polysaccharide Deactylase Domain-Containing Protein; Acetyl Xylan Esterase; Saccharide Deacetylase Slightly; Chitin Deacetylase; Chitinase; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Pda4C; PEP-CTERM Locus Polysaccharide Deactylase; Deacetylase

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MIRNPIKWPNGARCACAITFDVDADSLIHIARPEDAHRRLYPISMGRYGPNSGVPRILDTYRRLGLKQSFFMPGWVMERY
PETVEAILAGGHEIGHHGYLHEDPAEQNAEDQTYWFERALEVHRRLTGRTPRGYRAPVYNVTPEVLSLAVQHGLTYESSM
MADDLPYRIDTPTGALYELPVHWGSDDWPPFAHFDEIGYKMPVMSPRRGLEASFEEFEAQYEAGGLWIGIWHPFLTGRLA
RWRVVERWLEAVLARGDVWFAPLEEIAAYAASQEAEGLWQPHREPAAPYANPVLMEKTHDQF

Sequences:

>Translated_302_residues
MIRNPIKWPNGARCACAITFDVDADSLIHIARPEDAHRRLYPISMGRYGPNSGVPRILDTYRRLGLKQSFFMPGWVMERY
PETVEAILAGGHEIGHHGYLHEDPAEQNAEDQTYWFERALEVHRRLTGRTPRGYRAPVYNVTPEVLSLAVQHGLTYESSM
MADDLPYRIDTPTGALYELPVHWGSDDWPPFAHFDEIGYKMPVMSPRRGLEASFEEFEAQYEAGGLWIGIWHPFLTGRLA
RWRVVERWLEAVLARGDVWFAPLEEIAAYAASQEAEGLWQPHREPAAPYANPVLMEKTHDQF
>Mature_302_residues
MIRNPIKWPNGARCACAITFDVDADSLIHIARPEDAHRRLYPISMGRYGPNSGVPRILDTYRRLGLKQSFFMPGWVMERY
PETVEAILAGGHEIGHHGYLHEDPAEQNAEDQTYWFERALEVHRRLTGRTPRGYRAPVYNVTPEVLSLAVQHGLTYESSM
MADDLPYRIDTPTGALYELPVHWGSDDWPPFAHFDEIGYKMPVMSPRRGLEASFEEFEAQYEAGGLWIGIWHPFLTGRLA
RWRVVERWLEAVLARGDVWFAPLEEIAAYAASQEAEGLWQPHREPAAPYANPVLMEKTHDQF

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34643; Mature: 34643

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRNPIKWPNGARCACAITFDVDADSLIHIARPEDAHRRLYPISMGRYGPNSGVPRILDT
CCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHCEEEEEECCCCCCCCCCCHHHHH
YRRLGLKQSFFMPGWVMERYPETVEAILAGGHEIGHHGYLHEDPAEQNAEDQTYWFERAL
HHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHH
EVHRRLTGRTPRGYRAPVYNVTPEVLSLAVQHGLTYESSMMADDLPYRIDTPTGALYELP
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCEEEEE
VHWGSDDWPPFAHFDEIGYKMPVMSPRRGLEASFEEFEAQYEAGGLWIGIWHPFLTGRLA
EECCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
RWRVVERWLEAVLARGDVWFAPLEEIAAYAASQEAEGLWQPHREPAAPYANPVLMEKTHD
HHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
QF
CC
>Mature Secondary Structure
MIRNPIKWPNGARCACAITFDVDADSLIHIARPEDAHRRLYPISMGRYGPNSGVPRILDT
CCCCCCCCCCCCEEEEEEEEECCCCCEEEEECCCHHHCEEEEEECCCCCCCCCCCHHHHH
YRRLGLKQSFFMPGWVMERYPETVEAILAGGHEIGHHGYLHEDPAEQNAEDQTYWFERAL
HHHHCCCHHHCCCCHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHH
EVHRRLTGRTPRGYRAPVYNVTPEVLSLAVQHGLTYESSMMADDLPYRIDTPTGALYELP
HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCEEEECCCCCEEEEE
VHWGSDDWPPFAHFDEIGYKMPVMSPRRGLEASFEEFEAQYEAGGLWIGIWHPFLTGRLA
EECCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHH
RWRVVERWLEAVLARGDVWFAPLEEIAAYAASQEAEGLWQPHREPAAPYANPVLMEKTHD
HHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCC
QF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA