Click here to switch to the map view.

The map label for this gene is ydjX [C]

Identifier: 99080155

GI number: 99080155

Start: 319077

End: 319814

Strand: Direct

Name: ydjX [C]

Synonym: TM1040_0314

Alternate gene names: 99080155

Gene position: 319077-319814 (Clockwise)

Preceding gene: 99080151

Following gene: 99080156

Centisome position: 9.97

GC content: 63.69

Gene sequence:

>738_bases
ATGATGAGCGACACCCCTTCTTCTCCCAAGCGCAAGAACTGGCTGCGGCATCTGCCGCTCGCCCTGGTGGCGGTGGGGGC
TCTTGTCGGCGCCGTGACGCTGGGCGATGTGCTGTCGTTTGAAACCCTGCGCGACAACCGAGAAGCATTGTTGGCGTTCC
GCGACCAGAACTATCTGGGCCTCGTGCTGGTGTTTCTTGTCGCCTATGTCGCCATCGTGGCCTTCTCGCTGCCCGGGGCT
GCAGTCGCCTCGGTTACGGGCGGGTTCCTGTTCGGATTGGTCGCAGGCACCGGCTTGAATGTTCTGGCCGCAACCATCGG
GGCGATGGCGATCTTTCTGGCGGCGCGCTGGGGGCTTGGCGCGGCGCTTTCTGCCAAGATCGAGTCCAGCGAGGGGCGCA
TCCGGCGCCTGAAGTCGGCGCTTCATGATACCGAGATCGAGGTGCTGTTGCTGCTGCGCCTGGTGCCGGTGGTGCCGTTC
TTTGTCGCCAACCTCCTGCCGGCACTGGTCGGGGTGCGCGTGTGGAATTTCTTCTGGACCACGGCGCTGGGCATTATTCC
GGGGGCCATCGTGTTCACATGGATCGGGGTGGGACTCGGTGAGGTGTTCGATCGTGGCGAAAGCCCAAACCTGAGCCTGC
TGTGGGAGCCCCATATCATCGGTCCGATCCTCGGACTTTGCGCGCTGGCGGCGCTGCCGATCCTCATCAAAGCCCTGCGC
GGCACATCGGAGGTATAA

Upstream 100 bases:

>100_bases
ATCCCTCTCGCCAGCGCCACATCTGGGAGGATAGAGCAGTGAGACCCCTCAACACCTTTGTGCAACGGGTGGGTAACGGG
CCCAAGCTAAGGATGACACG

Downstream 100 bases:

>100_bases
GACATGGCTTCGATCAAATGTGATCTGCTCATTATTGGTGCGGGGTCTGGCGGGCTGTCCCTGGCTGCCGGTGCCAGCCA
GATGGGGGCGGATGTCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; SNARE Associated Golgi Protein-Related Protein; SNARE Associated Golgi Protein-Like Protein; SNARE Associated Golgi Protein-Associated Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; DedA Family Protein; Snare Associated Golgi Protein-Related Protein; SNARE-Associated Family Membrane Protein; Ribosomal Protein S

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MMSDTPSSPKRKNWLRHLPLALVAVGALVGAVTLGDVLSFETLRDNREALLAFRDQNYLGLVLVFLVAYVAIVAFSLPGA
AVASVTGGFLFGLVAGTGLNVLAATIGAMAIFLAARWGLGAALSAKIESSEGRIRRLKSALHDTEIEVLLLLRLVPVVPF
FVANLLPALVGVRVWNFFWTTALGIIPGAIVFTWIGVGLGEVFDRGESPNLSLLWEPHIIGPILGLCALAALPILIKALR
GTSEV

Sequences:

>Translated_245_residues
MMSDTPSSPKRKNWLRHLPLALVAVGALVGAVTLGDVLSFETLRDNREALLAFRDQNYLGLVLVFLVAYVAIVAFSLPGA
AVASVTGGFLFGLVAGTGLNVLAATIGAMAIFLAARWGLGAALSAKIESSEGRIRRLKSALHDTEIEVLLLLRLVPVVPF
FVANLLPALVGVRVWNFFWTTALGIIPGAIVFTWIGVGLGEVFDRGESPNLSLLWEPHIIGPILGLCALAALPILIKALR
GTSEV
>Mature_245_residues
MMSDTPSSPKRKNWLRHLPLALVAVGALVGAVTLGDVLSFETLRDNREALLAFRDQNYLGLVLVFLVAYVAIVAFSLPGA
AVASVTGGFLFGLVAGTGLNVLAATIGAMAIFLAARWGLGAALSAKIESSEGRIRRLKSALHDTEIEVLLLLRLVPVVPF
FVANLLPALVGVRVWNFFWTTALGIIPGAIVFTWIGVGLGEVFDRGESPNLSLLWEPHIIGPILGLCALAALPILIKALR
GTSEV

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081964, Length=162, Percent_Identity=28.3950617283951, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25986; Mature: 25986

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA