Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080090

Identifier: 99080090

GI number: 99080090

Start: 267190

End: 267591

Strand: Direct

Name: 99080090

Synonym: TM1040_0249

Alternate gene names: NA

Gene position: 267190-267591 (Clockwise)

Preceding gene: 99080089

Following gene: 99080091

Centisome position: 8.35

GC content: 47.26

Gene sequence:

>402_bases
GTGACAGGAATAGGTACGTTTATTCTTGTGAATTCCAAAGCTGATCCCTTTAAAATTGGACGACGTCCTCTTGTGCGGCT
CTTTTGGAATACTTTTGGAACTGCGTTTTTGGCTCATATAGGTTTTTTATCGGCCTTTACGACACCAGCAATGGTGTCCA
CATGGGTATCCTCCCAGTGGGAAGAGGCTGAGTATCAGGTGTTGAATCCACATGGTTCCAGCTCGCGACTTTGCGGAAAG
CGGATGGATTTAGGAGATCGTTCTTCCTTTCAATACGAGCTTTGCGGAGTTCCAGACGTTTTGAGAGACAGTCTGGAAAT
TGGAAGCCGTGTGGTTATTTCTGGGCGTAAAAACTGGTTTGGGATGGTCCCCGACACTATCAGGCGCGCTGAAGAACGTT
AG

Upstream 100 bases:

>100_bases
CGGAATCGTTAGCATCTCTTGGAGGTCTGCAAACGGCGGCTTTCTACCATCTGACGCATGGCACAGCTTAGGGGCACAAG
TCGCATAGGGGTGGGCCTGC

Downstream 100 bases:

>100_bases
GCCCTTGGGCTGCAAACGCTGCTGTTTTCCGTCTTCCTCGCCACCGTTGCCGGGCAGGCCACGGCGATGTTCATCCAGCC
GGATTGGTTTGATCCGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MTGIGTFILVNSKADPFKIGRRPLVRLFWNTFGTAFLAHIGFLSAFTTPAMVSTWVSSQWEEAEYQVLNPHGSSSRLCGK
RMDLGDRSSFQYELCGVPDVLRDSLEIGSRVVISGRKNWFGMVPDTIRRAEER

Sequences:

>Translated_133_residues
MTGIGTFILVNSKADPFKIGRRPLVRLFWNTFGTAFLAHIGFLSAFTTPAMVSTWVSSQWEEAEYQVLNPHGSSSRLCGK
RMDLGDRSSFQYELCGVPDVLRDSLEIGSRVVISGRKNWFGMVPDTIRRAEER
>Mature_132_residues
TGIGTFILVNSKADPFKIGRRPLVRLFWNTFGTAFLAHIGFLSAFTTPAMVSTWVSSQWEEAEYQVLNPHGSSSRLCGKR
MDLGDRSSFQYELCGVPDVLRDSLEIGSRVVISGRKNWFGMVPDTIRRAEER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14975; Mature: 14844

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIGTFILVNSKADPFKIGRRPLVRLFWNTFGTAFLAHIGFLSAFTTPAMVSTWVSSQW
CCCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
EEAEYQVLNPHGSSSRLCGKRMDLGDRSSFQYELCGVPDVLRDSLEIGSRVVISGRKNWF
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCC
GMVPDTIRRAEER
CCCCHHHHHHCCC
>Mature Secondary Structure 
TGIGTFILVNSKADPFKIGRRPLVRLFWNTFGTAFLAHIGFLSAFTTPAMVSTWVSSQW
CCCEEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
EEAEYQVLNPHGSSSRLCGKRMDLGDRSSFQYELCGVPDVLRDSLEIGSRVVISGRKNWF
CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCEEEEECCCCCC
GMVPDTIRRAEER
CCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA