| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080053
Identifier: 99080053
GI number: 99080053
Start: 228609
End: 229106
Strand: Reverse
Name: 99080053
Synonym: TM1040_0212
Alternate gene names: NA
Gene position: 229106-228609 (Counterclockwise)
Preceding gene: 99080055
Following gene: 99080048
Centisome position: 7.16
GC content: 57.43
Gene sequence:
>498_bases ATGACACCCACCCCCCGCACTTTCTCTCATATCGGCCTGTCCGTTCCGGACCTGGATGCCGCCGTCAAATTCTACTCTGA AGTCCTGGGGTTTTATGTCCTCATGCCGCCGAGCAAGGTTGTCGAAGACGACAGCGCGATTGGCGTCATGTGCACCGATG TCTTTGGCCCCGGCTGGGAGCATTTGCGGATTGCGCATCTTTCGACCGGCGACGGGATCGGCATTGAACTCTTTGAATTT GCAGGAAATCACGCACCGGATGACAACTTCGCCTTCCGTCGCCATGGCACATTCCACTTTGCGATCCAGGACCCGGATCT TGAGGGGCTCCTGGAAAAGATCATTGCCGCCGGAGGCAAGCAGCGCATGCCCGTGCGGGAGTATTTCCCCGGCGAAAAAC CCTACCGCATGGTCTACGTCGAGGACCCCTTTGGGAACATCTTCGAGCTCTATAGCCACAGTTATGAGCTGACCTATTCC GCCGGCGCCTATGCGTGA
Upstream 100 bases:
>100_bases AATGATAACCATTCATTTGCATTTTAATTCGATATGATAATTTCACATACGGGTGGCGCGTGTCTAGATTTCCATCAAGC AAATCTGAAAGGAGATCATC
Downstream 100 bases:
>100_bases GCCGACCTGCCGCCGCACTGTTTCACCAGCGCGGCGGCACCCCTTTTACCCTGTTTAAAATCCACAGGCCTCCAGCAGGA TCAGGCTCTGGTCTCGGCGA
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Glyoxalase Family Protein; Lactoylglutathione Lyase; Lactoylglutathione Lyase Family Protein; Glyoxalase/Bleomycin Resistance Protein; Dioxygenase Superfamily Protein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTPTPRTFSHIGLSVPDLDAAVKFYSEVLGFYVLMPPSKVVEDDSAIGVMCTDVFGPGWEHLRIAHLSTGDGIGIELFEF AGNHAPDDNFAFRRHGTFHFAIQDPDLEGLLEKIIAAGGKQRMPVREYFPGEKPYRMVYVEDPFGNIFELYSHSYELTYS AGAYA
Sequences:
>Translated_165_residues MTPTPRTFSHIGLSVPDLDAAVKFYSEVLGFYVLMPPSKVVEDDSAIGVMCTDVFGPGWEHLRIAHLSTGDGIGIELFEF AGNHAPDDNFAFRRHGTFHFAIQDPDLEGLLEKIIAAGGKQRMPVREYFPGEKPYRMVYVEDPFGNIFELYSHSYELTYS AGAYA >Mature_164_residues TPTPRTFSHIGLSVPDLDAAVKFYSEVLGFYVLMPPSKVVEDDSAIGVMCTDVFGPGWEHLRIAHLSTGDGIGIELFEFA GNHAPDDNFAFRRHGTFHFAIQDPDLEGLLEKIIAAGGKQRMPVREYFPGEKPYRMVYVEDPFGNIFELYSHSYELTYSA GAYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18414; Mature: 18283
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00934 GLYOXALASE_I_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTPRTFSHIGLSVPDLDAAVKFYSEVLGFYVLMPPSKVVEDDSAIGVMCTDVFGPGWE CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHCCCCCEEEEEECCCCCCCC HLRIAHLSTGDGIGIELFEFAGNHAPDDNFAFRRHGTFHFAIQDPDLEGLLEKIIAAGGK CEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHCCCC QRMPVREYFPGEKPYRMVYVEDPFGNIFELYSHSYELTYSAGAYA CCCCHHHHCCCCCCEEEEEEECCCCHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure TPTPRTFSHIGLSVPDLDAAVKFYSEVLGFYVLMPPSKVVEDDSAIGVMCTDVFGPGWE CCCCCCHHHCCCCCCCHHHHHHHHHHHHHEEEECCCHHHHCCCCCEEEEEECCCCCCCC HLRIAHLSTGDGIGIELFEFAGNHAPDDNFAFRRHGTFHFAIQDPDLEGLLEKIIAAGGK CEEEEEECCCCCCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCHHHHHHHHHHCCCC QRMPVREYFPGEKPYRMVYVEDPFGNIFELYSHSYELTYSAGAYA CCCCHHHHCCCCCCEEEEEEECCCCHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA