| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080020
Identifier: 99080020
GI number: 99080020
Start: 198664
End: 199296
Strand: Reverse
Name: 99080020
Synonym: TM1040_0179
Alternate gene names: NA
Gene position: 199296-198664 (Counterclockwise)
Preceding gene: 99080021
Following gene: 99080019
Centisome position: 6.23
GC content: 60.19
Gene sequence:
>633_bases ATGCTTCTCACCGACCTTGTCACCCCGCCCGACACAGCCCTCTGCGCCGCCGCAGAAGAGATGGCGCGCATGGCCAGCGA TCCCTTCCTCTACAACCATGTCAGCCGCTCCTATATCTTTGGCGCGCTGGCGGCGCGCGCAACGGGCACGCAGTATGATC CGGAGCTGTTTTACATCGCCGCCATGCTGCACGACCTTGGCCTGACCGAAACCTATATGGCAGAAGATCGCTTTGAGGTG GACGCCGCCGAAGCCGCCGCCAAGTTCCTTGCGGCGCAAAATGTCGAACAATCCCGCATCGACCGTGTCTGGGATGCGAT TGCGCTGCACACGACGTTTTCGATCCCGCAAAAAAAGTCGCCCGAGGCAGCCTTGGTGCAGATCGGCGCGGGGCTCGATG TGGGCGTCATGCCGCATGACCATATCACCCCAGAAGTGATGGAGCAGGTGCTTGACGCCTACCCTCGACTGGGGTTCAAA AAGGCCATGGAACAAGCCCTCATCAAGGTCTATGCCGCCAAGCCCATGACGGCGATGCATAATTTTGGCGCCGACGTGGC CCATCGTCATGTGCCGGACTTTCACCCGCCGCATTTTTGCGATGTCCTGCATGGGGCGGATTTCCCCGAATGA
Upstream 100 bases:
>100_bases GCGCCTTTTCTTTTTGTCACAAGCGATCTGAAGCCCGGCTCTTTTATTTTATACCGAATCGCATAATAAATGTGCAACCT TTGCGTACAGGATAATTCAG
Downstream 100 bases:
>100_bases GCAAGGCGGGGCAGGTACGGGGTCGGGGGCGTCCGCGCAAGTTCGACGAACAGGTGGTGCGCCAGACCATCCTGAGCGTG TTCTGGGAGAAGGGCTATGC
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; Cyanamide Hydratase; HD Domain-Containing; Sensory Box HD Domain-Containing Protein
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MLLTDLVTPPDTALCAAAEEMARMASDPFLYNHVSRSYIFGALAARATGTQYDPELFYIAAMLHDLGLTETYMAEDRFEV DAAEAAAKFLAAQNVEQSRIDRVWDAIALHTTFSIPQKKSPEAALVQIGAGLDVGVMPHDHITPEVMEQVLDAYPRLGFK KAMEQALIKVYAAKPMTAMHNFGADVAHRHVPDFHPPHFCDVLHGADFPE
Sequences:
>Translated_210_residues MLLTDLVTPPDTALCAAAEEMARMASDPFLYNHVSRSYIFGALAARATGTQYDPELFYIAAMLHDLGLTETYMAEDRFEV DAAEAAAKFLAAQNVEQSRIDRVWDAIALHTTFSIPQKKSPEAALVQIGAGLDVGVMPHDHITPEVMEQVLDAYPRLGFK KAMEQALIKVYAAKPMTAMHNFGADVAHRHVPDFHPPHFCDVLHGADFPE >Mature_210_residues MLLTDLVTPPDTALCAAAEEMARMASDPFLYNHVSRSYIFGALAARATGTQYDPELFYIAAMLHDLGLTETYMAEDRFEV DAAEAAAKFLAAQNVEQSRIDRVWDAIALHTTFSIPQKKSPEAALVQIGAGLDVGVMPHDHITPEVMEQVLDAYPRLGFK KAMEQALIKVYAAKPMTAMHNFGADVAHRHVPDFHPPHFCDVLHGADFPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23153; Mature: 23153
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTDLVTPPDTALCAAAEEMARMASDPFLYNHVSRSYIFGALAARATGTQYDPELFYIA CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AMLHDLGLTETYMAEDRFEVDAAEAAAKFLAAQNVEQSRIDRVWDAIALHTTFSIPQKKS HHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC PEAALVQIGAGLDVGVMPHDHITPEVMEQVLDAYPRLGFKKAMEQALIKVYAAKPMTAMH CCHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH NFGADVAHRHVPDFHPPHFCDVLHGADFPE HCCHHHHHHCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MLLTDLVTPPDTALCAAAEEMARMASDPFLYNHVSRSYIFGALAARATGTQYDPELFYIA CCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AMLHDLGLTETYMAEDRFEVDAAEAAAKFLAAQNVEQSRIDRVWDAIALHTTFSIPQKKS HHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCC PEAALVQIGAGLDVGVMPHDHITPEVMEQVLDAYPRLGFKKAMEQALIKVYAAKPMTAMH CCHHEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHH NFGADVAHRHVPDFHPPHFCDVLHGADFPE HCCHHHHHHCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA