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The map label for this gene is rsbT [H]

Identifier: 99079980

GI number: 99079980

Start: 152904

End: 153326

Strand: Reverse

Name: rsbT [H]

Synonym: TM1040_0139

Alternate gene names: 99079980

Gene position: 153326-152904 (Counterclockwise)

Preceding gene: 99079981

Following gene: 99079979

Centisome position: 4.79

GC content: 56.97

Gene sequence:

>423_bases
ATGAACGCCATTCTCACCGAAACTGACCTGGTTCAGTTGGAGATCGAGGATGATCGCGACGTGGTCACCGCGCGCAGCAA
TGGGCGCAAGATGGCGGCTGAGATGGGGTTTTCGCGCCCCGATCAGGCGCTCATCGCCACCGCGATATCCGAGTTGGCGC
GCAACATCGTAAACTATGCCGGAAAGGGAGGGATCGAGCTCGGAAAACTTCAAAAGCCAGGGTACGTGGGCATTCAGGTT
GTGGCTCATGACGAGGGACCGGGTATTGCGGACATAGAGTCCGCCATGATTGATGGCTTTTCTACGGGTAATAGTCTCGG
CTTGGGCTTGCCGGGGACAAAACGGATTGTCGACGAATTTCAGCTGCAATCCGCGCCCGGAGACGGTGTTACGGTGACGG
CGGTAAAATGGCTTCGCATCTGA

Upstream 100 bases:

>100_bases
CCGAAGTGGCCATGGCCATGGTTCTCCTGGGCCTGTCGCTAGAAGGCGTGCCAACAGCACTTGATCTCGACCATGGCATC
GAACTTCTGAAAGCCAGACC

Downstream 100 bases:

>100_bases
CCGATGGCGTGATTCATGCCACGACCAGGGCCGCGTCTTTGCATTGGTGCATCGCGCAGGCCACCAAAACCGATGGCGCA
TTGAATGGGGACGGCTACCT

Product: putative anti-sigma regulatory factor, serine/threonine protein kinase

Products: NA

Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNAILTETDLVQLEIEDDRDVVTARSNGRKMAAEMGFSRPDQALIATAISELARNIVNYAGKGGIELGKLQKPGYVGIQV
VAHDEGPGIADIESAMIDGFSTGNSLGLGLPGTKRIVDEFQLQSAPGDGVTVTAVKWLRI

Sequences:

>Translated_140_residues
MNAILTETDLVQLEIEDDRDVVTARSNGRKMAAEMGFSRPDQALIATAISELARNIVNYAGKGGIELGKLQKPGYVGIQV
VAHDEGPGIADIESAMIDGFSTGNSLGLGLPGTKRIVDEFQLQSAPGDGVTVTAVKWLRI
>Mature_140_residues
MNAILTETDLVQLEIEDDRDVVTARSNGRKMAAEMGFSRPDQALIATAISELARNIVNYAGKGGIELGKLQKPGYVGIQV
VAHDEGPGIADIESAMIDGFSTGNSLGLGLPGTKRIVDEFQLQSAPGDGVTVTAVKWLRI

Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.11.1 [H]

Molecular weight: Translated: 14824; Mature: 14824

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAILTETDLVQLEIEDDRDVVTARSNGRKMAAEMGFSRPDQALIATAISELARNIVNYA
CCCCCCCCEEEEEEECCCCCEEEECCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GKGGIELGKLQKPGYVGIQVVAHDEGPGIADIESAMIDGFSTGNSLGLGLPGTKRIVDEF
CCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
QLQSAPGDGVTVTAVKWLRI
HHCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MNAILTETDLVQLEIEDDRDVVTARSNGRKMAAEMGFSRPDQALIATAISELARNIVNYA
CCCCCCCCEEEEEEECCCCCEEEECCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
GKGGIELGKLQKPGYVGIQVVAHDEGPGIADIESAMIDGFSTGNSLGLGLPGTKRIVDEF
CCCCCEECCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH
QLQSAPGDGVTVTAVKWLRI
HHCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]