Click here to switch to the map view.

The map label for this gene is 99079929

Identifier: 99079929

GI number: 99079929

Start: 90697

End: 90891

Strand: Reverse

Name: 99079929

Synonym: TM1040_0088

Alternate gene names: NA

Gene position: 90891-90697 (Counterclockwise)

Preceding gene: 99079937

Following gene: 99079927

Centisome position: 2.84

GC content: 63.08

Gene sequence:

>195_bases
ATGAGCGACACCCCCGAATCCAACCGGGCAAAGGACCTGCCCGCAGCCGCCCAGCGCGCTTTGGCGGAGGCTGAGGAACG
CCGCAAGGCCCGTGACGCTGAAAAACCGTTGCCAACCGAACTTGGTGGTCGCGACGGCCCCGATCCCGCGCGCTATGGCG
ATTGGGAGAAAAAAGGCATCGCGATCGATTTTTGA

Upstream 100 bases:

>100_bases
ATAGAGAAGTGCTCCTGATCGGGGATCGGCTTGTCCACATCGGACGCGGGCGTATATCATAGGCTCAGGATAATGAAACC
CACGCTGCGGAGAAGCCCCG

Downstream 100 bases:

>100_bases
GCTCGTCCAGTTTTTGAGCACAGCCACAAGGGGCTCTGCCCCTCGCTCCCTGCGGGCGCTCACCCCGGGATATTTGGGGA
TAGAAGAAGCTCCGACGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 63

Protein sequence:

>64_residues
MSDTPESNRAKDLPAAAQRALAEAEERRKARDAEKPLPTELGGRDGPDPARYGDWEKKGIAIDF

Sequences:

>Translated_64_residues
MSDTPESNRAKDLPAAAQRALAEAEERRKARDAEKPLPTELGGRDGPDPARYGDWEKKGIAIDF
>Mature_63_residues
SDTPESNRAKDLPAAAQRALAEAEERRKARDAEKPLPTELGGRDGPDPARYGDWEKKGIAIDF

Specific function: Unknown

COG id: COG5508

COG function: function code S; Uncharacterized conserved small protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7037; Mature: 6906

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTPESNRAKDLPAAAQRALAEAEERRKARDAEKPLPTELGGRDGPDPARYGDWEKKGI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AIDF
CCCC
>Mature Secondary Structure 
SDTPESNRAKDLPAAAQRALAEAEERRKARDAEKPLPTELGGRDGPDPARYGDWEKKGI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AIDF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA