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The map label for this gene is yckB [H]

Identifier: 94994194

GI number: 94994194

Start: 771723

End: 772622

Strand: Direct

Name: yckB [H]

Synonym: MGAS10750_Spy0798

Alternate gene names: 94994194

Gene position: 771723-772622 (Clockwise)

Preceding gene: 94994193

Following gene: 94994195

Centisome position: 39.84

GC content: 36.89

Gene sequence:

>900_bases
ATGTTATACTATTCTTATCTTAATAAAGGAGTTACTATGAAGAAATCAGTTACTTTACTGTCTATCGGACTTGCCAGCCT
TTTATTGGCAGCATGTGCGCCACATAAATCTCAAAAATCAAGTTGGGAGACTATCAAAGAAAAAGGGGTGTTAAAAGTAG
CTACCCCAGGAACCTATCAGCCAACTTCTTTTTACAACGATAATAATGAGTTAGTAGGTTACGAAGTAGATATGGTCAAG
GAAATCGGTAAACGACTTAACATTAAAGTCAAGTTTGTTGAAACAGGATTTGACCAAGCCTTTACCTCAGTTGATAGTGG
TCGAGTGGATATTTCTTTGAACAACTTTGACATTACCCCAAAACGTCAGAAAAAATACAATATCTCTACGCCTTATAAAT
ACGGGGTAGGAGGCATGATTGTCCGTGCTGATGGCAGCTCAAACATGGTTAAAAAAGATCTTAGCGACTGGAAAGGAAAA
AAAGCAGCTGGTGCTTCTGGAACAGAATACATGAAAGTAGCGCAAAAACAGGGAGCTGAACTGGTGACCTACGATAATGT
TACAGGAGATGTTTATCTAAACGATGTGGCTAACGGTCGAACAGATTTCATTCCAAATGATTACCCAGCTCAAAAATTAT
TTGTGGATTACATGTTATCTCAAAATCCAAATCTAAATGTCAAAATGAGCGATGTTCAGTACAACCCAACCGAACAAGGA
ATTGTTATGAACAAAAAAGACGATAGCCTCAAGAAAAAAATAGATGCTGTTATTAAAGACATGATAAAAGATGGTAGCTT
GAAGAAAATCTCTGAAACCTACTATGCTGGTCAAGATTTGACAAAACCTTTTGGCAAAGACAAAAAAATTCCCGTCATTG
ATACGAAAGACGTTAACTAA

Upstream 100 bases:

>100_bases
ATTGAAGATTCCTCAATAATAATCTTATAAAACAGTTTAACTATTATAGATTAACTTTTTAAAGAGATTGAGCGCTCACT
GATAACACAACTTAATCAAA

Downstream 100 bases:

>100_bases
TACTTGATGTTAAAGGAGTCCTAACCACATGATTGATATCCCATTAATGAAAGATAGTTTAGGATTTGTGTTATCGGGAT
TACCTTATACCCTTGGTATT

Product: cystine-binding protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MLYYSYLNKGVTMKKSVTLLSIGLASLLLAACAPHKSQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVK
EIGKRLNIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGMIVRADGSSNMVKKDLSDWKGK
KAAGASGTEYMKVAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQG
IVMNKKDDSLKKKIDAVIKDMIKDGSLKKISETYYAGQDLTKPFGKDKKIPVIDTKDVN

Sequences:

>Translated_299_residues
MLYYSYLNKGVTMKKSVTLLSIGLASLLLAACAPHKSQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVK
EIGKRLNIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGMIVRADGSSNMVKKDLSDWKGK
KAAGASGTEYMKVAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQG
IVMNKKDDSLKKKIDAVIKDMIKDGSLKKISETYYAGQDLTKPFGKDKKIPVIDTKDVN
>Mature_299_residues
MLYYSYLNKGVTMKKSVTLLSIGLASLLLAACAPHKSQKSSWETIKEKGVLKVATPGTYQPTSFYNDNNELVGYEVDMVK
EIGKRLNIKVKFVETGFDQAFTSVDSGRVDISLNNFDITPKRQKKYNISTPYKYGVGGMIVRADGSSNMVKKDLSDWKGK
KAAGASGTEYMKVAQKQGAELVTYDNVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQG
IVMNKKDDSLKKKIDAVIKDMIKDGSLKKISETYYAGQDLTKPFGKDKKIPVIDTKDVN

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=241, Percent_Identity=32.7800829875519, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787085, Length=269, Percent_Identity=29.7397769516729, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1787088, Length=255, Percent_Identity=28.2352941176471, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788649, Length=269, Percent_Identity=25.2788104089219, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=24.6753246753247, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1787031, Length=265, Percent_Identity=24.9056603773585, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 33293; Mature: 33293

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYYSYLNKGVTMKKSVTLLSIGLASLLLAACAPHKSQKSSWETIKEKGVLKVATPGTYQ
CEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCC
PTSFYNDNNELVGYEVDMVKEIGKRLNIKVKFVETGFDQAFTSVDSGRVDISLNNFDITP
CCCEECCCCCEEEEEHHHHHHHHHHCEEEEEEEECCHHHHHHCCCCCEEEEEECCCCCCC
KRQKKYNISTPYKYGVGGMIVRADGSSNMVKKDLSDWKGKKAAGASGTEYMKVAQKQGAE
CCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCE
LVTYDNVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQG
EEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCEECCCCCC
IVMNKKDDSLKKKIDAVIKDMIKDGSLKKISETYYAGQDLTKPFGKDKKIPVIDTKDVN
EEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCEECCCCCC
>Mature Secondary Structure
MLYYSYLNKGVTMKKSVTLLSIGLASLLLAACAPHKSQKSSWETIKEKGVLKVATPGTYQ
CEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCC
PTSFYNDNNELVGYEVDMVKEIGKRLNIKVKFVETGFDQAFTSVDSGRVDISLNNFDITP
CCCEECCCCCEEEEEHHHHHHHHHHCEEEEEEEECCHHHHHHCCCCCEEEEEECCCCCCC
KRQKKYNISTPYKYGVGGMIVRADGSSNMVKKDLSDWKGKKAAGASGTEYMKVAQKQGAE
CCCCCCCCCCCEEECCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCE
LVTYDNVTGDVYLNDVANGRTDFIPNDYPAQKLFVDYMLSQNPNLNVKMSDVQYNPTEQG
EEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCEECCCCCC
IVMNKKDDSLKKKIDAVIKDMIKDGSLKKISETYYAGQDLTKPFGKDKKIPVIDTKDVN
EEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHCCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7704255; 9384377 [H]