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The map label for this gene is yrkO [H]

Identifier: 94986424

GI number: 94986424

Start: 2446024

End: 2447190

Strand: Reverse

Name: yrkO [H]

Synonym: Dgeo_2327

Alternate gene names: 94986424

Gene position: 2447190-2446024 (Counterclockwise)

Preceding gene: 94986425

Following gene: 94986423

Centisome position: 99.19

GC content: 68.98

Gene sequence:

>1167_bases
ATGTCGAGGCCCGCTTCGCCCGAATCCGTCCCCGCTCCGGCGTCCGGGCCACGTCCAGTGGAGGCGGGGGAACGCGCGCT
GCTGCCGGATGTGCTGCGGGGGCTGGCGCTGCTGGGGATCCTGATCATCAACGTGCAGAACTTCGCGGGCTTCCGCGAGT
GGATGCAGACCGGCCTGGACCGCGGGGTGCAGGTATTCACCGACATCTTTTTCAATGGGCGCTCGATCAGCCTGTTTGCC
ATGCTGTTTGGTTGGGGAGCGGCCGGGCTGCTGGCCAGGTACGGGCCAGGCAGGCTGGCGCGGCGGCTGGCCGTGCTGCT
GCTGATCGGCGCGGCGCATCACGTGCTGGTGTGGTACGGGGATATCATCGCGACCTATGCGCTGCTCGCCTTCGTGCTGC
TGTTTACGGCTCGGCTGACGGCGCCGCTTCTGCTGGGTCTGGCGGGGATCCTCGGTGGGTGGTGGCTGGCCGAGGGACTG
CTGGCCGGTTTCGGAGCGCTGGGCAGCAGCTGGCCCCGTTTTTCGGGTCTGCCCGACCTGACGCCGGGGATGTCCTTTCT
GCAGATTGTGGCTGCGCGGGCCGCGACCTTTGGGGAGGATCTGATTGGTGGCAGTCTCTACAACGGGCCTTGGCTGATCG
CCCTGTTCGCTCTGGGAGCGGCTGCGCAGCGCTTCGGACTGCTCACCCGCCCGCAGGCCCATCTGCCGCTGCTGCGCCGC
CTCGCCGTGTGGGGGCTGGCGGTGGGGTTGCCGCTGGGCGTGCTGCTCGCTTGGCTCAACACCCAGAGCACCTTTGCGGC
GGGGCTGCTCGCTATCCCCGTTCGGATGGGGGGCGGCCTTGCCACCGCGCTGGGGTACGTGGGCGTGCTGGGGATGCTGG
CAGCGCAGGGTCGCCTGGGACCGCTGCGGGCCTTTGCCGCCAGCGGGCGCCTCGCCATGAGCAACTACATCGCGCAGAGC
CTGATCATGACCACCTTCTTCTATCCCTACGGTGGAGGATGGTACGGCCACTGGGGAGCTGCACCCGCCGTGCTGCTGGC
GCTGATCGTGGGGCTGGTGCAGCTGCCGGTCAGCGCCTGGCTGCTGGAACGGTTCGGAACGGGACCGCTCGAACGCCTCA
CGCGGGTGCTGGTGTATGGCCGGAGGGCACGGCGGGAACCGGACTGA

Upstream 100 bases:

>100_bases
TACAGTTGACTTCCCCTGCATCCCACGCTATCTTGATGTCATCACCGCCTGAGAAGGCGGCTTTTTTTATGACCTGCTCC
AGGAGGCGCTAGCCTGGGGT

Downstream 100 bases:

>100_bases
TCCTGAGTCCGTACCCTCAGTATGGAATTCCGACTGCATCCTGAGGTCATCCACACCGCCGAGTCCGCAGGGGCCCGGCT
GGAGGTGATCGAGTTCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSRPASPESVPAPASGPRPVEAGERALLPDVLRGLALLGILIINVQNFAGFREWMQTGLDRGVQVFTDIFFNGRSISLFA
MLFGWGAAGLLARYGPGRLARRLAVLLLIGAAHHVLVWYGDIIATYALLAFVLLFTARLTAPLLLGLAGILGGWWLAEGL
LAGFGALGSSWPRFSGLPDLTPGMSFLQIVAARAATFGEDLIGGSLYNGPWLIALFALGAAAQRFGLLTRPQAHLPLLRR
LAVWGLAVGLPLGVLLAWLNTQSTFAAGLLAIPVRMGGGLATALGYVGVLGMLAAQGRLGPLRAFAASGRLAMSNYIAQS
LIMTTFFYPYGGGWYGHWGAAPAVLLALIVGLVQLPVSAWLLERFGTGPLERLTRVLVYGRRARREPD

Sequences:

>Translated_388_residues
MSRPASPESVPAPASGPRPVEAGERALLPDVLRGLALLGILIINVQNFAGFREWMQTGLDRGVQVFTDIFFNGRSISLFA
MLFGWGAAGLLARYGPGRLARRLAVLLLIGAAHHVLVWYGDIIATYALLAFVLLFTARLTAPLLLGLAGILGGWWLAEGL
LAGFGALGSSWPRFSGLPDLTPGMSFLQIVAARAATFGEDLIGGSLYNGPWLIALFALGAAAQRFGLLTRPQAHLPLLRR
LAVWGLAVGLPLGVLLAWLNTQSTFAAGLLAIPVRMGGGLATALGYVGVLGMLAAQGRLGPLRAFAASGRLAMSNYIAQS
LIMTTFFYPYGGGWYGHWGAAPAVLLALIVGLVQLPVSAWLLERFGTGPLERLTRVLVYGRRARREPD
>Mature_387_residues
SRPASPESVPAPASGPRPVEAGERALLPDVLRGLALLGILIINVQNFAGFREWMQTGLDRGVQVFTDIFFNGRSISLFAM
LFGWGAAGLLARYGPGRLARRLAVLLLIGAAHHVLVWYGDIIATYALLAFVLLFTARLTAPLLLGLAGILGGWWLAEGLL
AGFGALGSSWPRFSGLPDLTPGMSFLQIVAARAATFGEDLIGGSLYNGPWLIALFALGAAAQRFGLLTRPQAHLPLLRRL
AVWGLAVGLPLGVLLAWLNTQSTFAAGLLAIPVRMGGGLATALGYVGVLGMLAAQGRLGPLRAFAASGRLAMSNYIAQSL
IMTTFFYPYGGGWYGHWGAAPAVLLALIVGLVQLPVSAWLLERFGTGPLERLTRVLVYGRRARREPD

Specific function: Involved in transport (Potential) [H]

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788475, Length=378, Percent_Identity=29.3650793650794, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007349 [H]

Pfam domain/function: PF04235 DUF418 [H]

EC number: NA

Molecular weight: Translated: 41204; Mature: 41073

Theoretical pI: Translated: 11.46; Mature: 11.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPASPESVPAPASGPRPVEAGERALLPDVLRGLALLGILIINVQNFAGFREWMQTGLD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGVQVFTDIFFNGRSISLFAMLFGWGAAGLLARYGPGRLARRLAVLLLIGAAHHVLVWYG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
DIIATYALLAFVLLFTARLTAPLLLGLAGILGGWWLAEGLLAGFGALGSSWPRFSGLPDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPGMSFLQIVAARAATFGEDLIGGSLYNGPWLIALFALGAAAQRFGLLTRPQAHLPLLRR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LAVWGLAVGLPLGVLLAWLNTQSTFAAGLLAIPVRMGGGLATALGYVGVLGMLAAQGRLG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PLRAFAASGRLAMSNYIAQSLIMTTFFYPYGGGWYGHWGAAPAVLLALIVGLVQLPVSAW
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLERFGTGPLERLTRVLVYGRRARREPD
HHHHHCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRPASPESVPAPASGPRPVEAGERALLPDVLRGLALLGILIINVQNFAGFREWMQTGLD
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGVQVFTDIFFNGRSISLFAMLFGWGAAGLLARYGPGRLARRLAVLLLIGAAHHVLVWYG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
DIIATYALLAFVLLFTARLTAPLLLGLAGILGGWWLAEGLLAGFGALGSSWPRFSGLPDL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TPGMSFLQIVAARAATFGEDLIGGSLYNGPWLIALFALGAAAQRFGLLTRPQAHLPLLRR
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LAVWGLAVGLPLGVLLAWLNTQSTFAAGLLAIPVRMGGGLATALGYVGVLGMLAAQGRLG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCC
PLRAFAASGRLAMSNYIAQSLIMTTFFYPYGGGWYGHWGAAPAVLLALIVGLVQLPVSAW
HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLERFGTGPLERLTRVLVYGRRARREPD
HHHHHCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]