| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986359
Identifier: 94986359
GI number: 94986359
Start: 2385933
End: 2386607
Strand: Reverse
Name: 94986359
Synonym: Dgeo_2260
Alternate gene names: NA
Gene position: 2386607-2385933 (Counterclockwise)
Preceding gene: 94986360
Following gene: 94986355
Centisome position: 96.73
GC content: 63.7
Gene sequence:
>675_bases ATGCCGGGGGTGGGCAGCGGGCCGGGCGCCGTGCTCGACCGCACGCTGACCGATGTCAGCTACAGCACGAACACCGCCAA CGCCCTGATTCACCTCTACCGCGCCGAGGTCGGCAAGATGACCGCCTACCGCCAGCGGCTCGACATGACGACCAATTGGG CGGTTGTGACGACGGCGGGCCTGGCGAGCTTCGCGCTGGGCGACCCCAACAACAGCCACGCGACCTTTCTGTTTGCCATG TTCATGAACTTTTTCTTTCTGCGGCTGGAGGCGCGGCGCTTCCGCATCTATGAGGTCGCCCACCACCGCGTGCGCATCAT GGAGCGCTTCTTTTTTCCGGCGATGCTGGGCGAGAAGGTGGACCCCGGCTGGCATCAGCTTCTGCTCGCCGAACTCGCCA AGCCGCGCAGTCCGATGAGCCGCCTCGATGCCTTGGGTTGGCGGCTGAACCGCAACTACCTGTGGATCTACGCGGCGGTG CTGCTTGCCTGGTTTGCCAAACTCGACCTCGATCAGCCCAAGGGTTGGGTGCTGGAGTTTCCGCAGGCCTTGGCCCTGGC CGACATCGGCAACTTTCCCGGCTGGCTGGTCTTTTTGGGCGTGTTTGTGTTCTACGCGTTTCTGATTGGTTTGGCGATCC GGGCGGCGCACACCTATCCGCTCGAGGAGGGGTAA
Upstream 100 bases:
>100_bases CGTTGGAGCCGAGCGGCGCACCAACCTTTTTTTGCGCTGAACCAGGGGATGGACTGATGAAGGCTGACCCGAGAGAGCTG ATTCGCGCGGAGGTGGGCTG
Downstream 100 bases:
>100_bases GGGGGCGGAGGGGTTATCTTCTTCCCTTCTCCAACCTCCCCCGGACCACCCTGCCTTCCCGCCACACCTGTACCCCGGCC AGCAGCAGGGCTTGGGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MPGVGSGPGAVLDRTLTDVSYSTNTANALIHLYRAEVGKMTAYRQRLDMTTNWAVVTTAGLASFALGDPNNSHATFLFAM FMNFFFLRLEARRFRIYEVAHHRVRIMERFFFPAMLGEKVDPGWHQLLLAELAKPRSPMSRLDALGWRLNRNYLWIYAAV LLAWFAKLDLDQPKGWVLEFPQALALADIGNFPGWLVFLGVFVFYAFLIGLAIRAAHTYPLEEG
Sequences:
>Translated_224_residues MPGVGSGPGAVLDRTLTDVSYSTNTANALIHLYRAEVGKMTAYRQRLDMTTNWAVVTTAGLASFALGDPNNSHATFLFAM FMNFFFLRLEARRFRIYEVAHHRVRIMERFFFPAMLGEKVDPGWHQLLLAELAKPRSPMSRLDALGWRLNRNYLWIYAAV LLAWFAKLDLDQPKGWVLEFPQALALADIGNFPGWLVFLGVFVFYAFLIGLAIRAAHTYPLEEG >Mature_223_residues PGVGSGPGAVLDRTLTDVSYSTNTANALIHLYRAEVGKMTAYRQRLDMTTNWAVVTTAGLASFALGDPNNSHATFLFAMF MNFFFLRLEARRFRIYEVAHHRVRIMERFFFPAMLGEKVDPGWHQLLLAELAKPRSPMSRLDALGWRLNRNYLWIYAAVL LAWFAKLDLDQPKGWVLEFPQALALADIGNFPGWLVFLGVFVFYAFLIGLAIRAAHTYPLEEG
Specific function: Unknown
COG id: COG5530
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25407; Mature: 25276
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGVGSGPGAVLDRTLTDVSYSTNTANALIHLYRAEVGKMTAYRQRLDMTTNWAVVTTAG CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH LASFALGDPNNSHATFLFAMFMNFFFLRLEARRFRIYEVAHHRVRIMERFFFPAMLGEKV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPGWHQLLLAELAKPRSPMSRLDALGWRLNRNYLWIYAAVLLAWFAKLDLDQPKGWVLEF CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH PQALALADIGNFPGWLVFLGVFVFYAFLIGLAIRAAHTYPLEEG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PGVGSGPGAVLDRTLTDVSYSTNTANALIHLYRAEVGKMTAYRQRLDMTTNWAVVTTAG CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHH LASFALGDPNNSHATFLFAMFMNFFFLRLEARRFRIYEVAHHRVRIMERFFFPAMLGEKV HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPGWHQLLLAELAKPRSPMSRLDALGWRLNRNYLWIYAAVLLAWFAKLDLDQPKGWVLEF CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHH PQALALADIGNFPGWLVFLGVFVFYAFLIGLAIRAAHTYPLEEG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA