Click here to switch to the map view.

The map label for this gene is cobC [C]

Identifier: 94986327

GI number: 94986327

Start: 2348373

End: 2349056

Strand: Reverse

Name: cobC [C]

Synonym: Dgeo_2228

Alternate gene names: 94986327

Gene position: 2349056-2348373 (Counterclockwise)

Preceding gene: 94986328

Following gene: 94986325

Centisome position: 95.21

GC content: 64.77

Gene sequence:

>684_bases
GTGGTGGTTGGCCTTCGCCCTGGTCCATGGCCATCAAGACCTGAGATGATCGCTCAGACGCTCCACCTTACCCTGCTCCG
CCACGGCCGCAGCCGCGCCGATGACGAGGGGGTGCATGAGGGCCGTTACGACTCCCCACTGACTGAGGTGGGCCGCGTTC
AGGCCCAGGCGCTTGCCGAGTACTGGCGGACACACCCGCCGGGCTTCGATTTGGCCTTCTGTTCCACGCTGGCCCGCGCG
CACGAGACAGCCCGCATCATCACCGACATGCTGGGAGTGCCCCTGCGCCCCGATGACCTGTGGCGGGAGTGGGACAACGG
TCCTCTGGCGGGTCTGCCGCGTGACGAGGCGCTGCACCGTTTTCCCCTCCCCGCCTTTCGGCACGATCTTGATCCCTTCA
CTATTGATGGGGGTGAGAGTCAGGCGGCGATTCGGGCGCGGGCACTCCTGGCCCTGGAGCGTGTGTGGCAGACCGGGGTC
ACGAACGTGTTGTTGGTATCGCACGGTGGCTTTCTCAACAGTGTGCTGCGTGAACTGACCGGAGCAGGGCGGGGTTGGTT
CGCCTTTGGCGACACGGGATTTGCCACTGTGGAACTCTCCCGCACCAGTCATACCGCCGTACTGACTGCCGTGAACCTGA
CCCCGCACCTCTCTATTCCTGTCGCAGCAGCGGATACGGATTGA

Upstream 100 bases:

>100_bases
GGCCGGACGGAGGCGAGCCTGTTGCGGGAAGCGCTGGACGAGCTGATTGAGCGGTACCGGGAGGCGCTGTAATGCGGGAG
CGGGAAACGGTGCGTGGCCC

Downstream 100 bases:

>100_bases
TCGCCCCTCGTGCCGTGTAGATGCCGTAGTGCAGGTGGGTGGGCGTGCCCCGCGCGTTGCCGCTGTCGCCGACATAGCCC
ACCACGTCCCCAGCCTCGAC

Product: phosphoglycerate mutase

Products: NA

Alternate protein names: Alpha-Ribazole-5-Phosphate Phosphatase; Phosphoglyceromutase; Phosphoglycerate Mutase-Related Protein; Phosphoglycerate Mutase GpmB

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MVVGLRPGPWPSRPEMIAQTLHLTLLRHGRSRADDEGVHEGRYDSPLTEVGRVQAQALAEYWRTHPPGFDLAFCSTLARA
HETARIITDMLGVPLRPDDLWREWDNGPLAGLPRDEALHRFPLPAFRHDLDPFTIDGGESQAAIRARALLALERVWQTGV
TNVLLVSHGGFLNSVLRELTGAGRGWFAFGDTGFATVELSRTSHTAVLTAVNLTPHLSIPVAAADTD

Sequences:

>Translated_227_residues
MVVGLRPGPWPSRPEMIAQTLHLTLLRHGRSRADDEGVHEGRYDSPLTEVGRVQAQALAEYWRTHPPGFDLAFCSTLARA
HETARIITDMLGVPLRPDDLWREWDNGPLAGLPRDEALHRFPLPAFRHDLDPFTIDGGESQAAIRARALLALERVWQTGV
TNVLLVSHGGFLNSVLRELTGAGRGWFAFGDTGFATVELSRTSHTAVLTAVNLTPHLSIPVAAADTD
>Mature_227_residues
MVVGLRPGPWPSRPEMIAQTLHLTLLRHGRSRADDEGVHEGRYDSPLTEVGRVQAQALAEYWRTHPPGFDLAFCSTLARA
HETARIITDMLGVPLRPDDLWREWDNGPLAGLPRDEALHRFPLPAFRHDLDPFTIDGGESQAAIRARALLALERVWQTGV
TNVLLVSHGGFLNSVLRELTGAGRGWFAFGDTGFATVELSRTSHTAVLTAVNLTPHLSIPVAAADTD

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.73 [C]

Molecular weight: Translated: 24917; Mature: 24917

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGLRPGPWPSRPEMIAQTLHLTLLRHGRSRADDEGVHEGRYDSPLTEVGRVQAQALAE
CEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
YWRTHPPGFDLAFCSTLARAHETARIITDMLGVPLRPDDLWREWDNGPLAGLPRDEALHR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHH
FPLPAFRHDLDPFTIDGGESQAAIRARALLALERVWQTGVTNVLLVSHGGFLNSVLRELT
CCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
GAGRGWFAFGDTGFATVELSRTSHTAVLTAVNLTPHLSIPVAAADTD
CCCCCEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCC
>Mature Secondary Structure
MVVGLRPGPWPSRPEMIAQTLHLTLLRHGRSRADDEGVHEGRYDSPLTEVGRVQAQALAE
CEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
YWRTHPPGFDLAFCSTLARAHETARIITDMLGVPLRPDDLWREWDNGPLAGLPRDEALHR
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHH
FPLPAFRHDLDPFTIDGGESQAAIRARALLALERVWQTGVTNVLLVSHGGFLNSVLRELT
CCCHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
GAGRGWFAFGDTGFATVELSRTSHTAVLTAVNLTPHLSIPVAAADTD
CCCCCEEEECCCCEEEEEECCCCCEEEEEEEECCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA