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The map label for this gene is arlR [H]

Identifier: 94986314

GI number: 94986314

Start: 2335122

End: 2335784

Strand: Reverse

Name: arlR [H]

Synonym: Dgeo_2215

Alternate gene names: 94986314

Gene position: 2335784-2335122 (Counterclockwise)

Preceding gene: 94986318

Following gene: 94986313

Centisome position: 94.67

GC content: 69.38

Gene sequence:

>663_bases
ATGCGGCTGCTGCTTGTCGAGGACGACCCGCGCATCGCGGAACCTACGCTGGAGGCGCTGCGTGAGGCGGGGTACGCGGT
GACGTGGCGGCAGACTGGCCCCGCCGGACTGGAGGAGGCGCTGCTGGGCGAGTATCCCCTCATCGTGCTGGACGTGATGC
TGCCCGGAATGGACGGCTTTGCGGTCGCACGTGAACTTCGTGCGGCGAATGTAGCCGGGGCAATTCTATTTTTGACGGCG
CGTGGGGAGCTGGAGGACCGGGTGCAGGGCCTCGACCTGGGTGGGGACGCCTATCTCGTCAAACCTTTTGCGGTGCCGGA
ACTGCTGGCGACCCTGCGCGCTCTGACGCGCCGGGAGCGGGGGCAGGGGGCGCCCCGCGTCGCCTTTGCGGGGGGGCGTG
GCAGGCTGGACACTGTGGCCCGCACCGTCACCTGGGACGGGGAGGAGGTCGCAGTGACAGGCCGCGAATACGCCCTCCTG
GAGGTCTTGGTCCTCTCGCCCGACCGCTGGTTTACCCGCGAGGAACTGCTCGACCGGGTATGGGGACCGGAGTTTGGCGG
TGAGGCCCGCATCGTAGACGTCTACGTGCGGTATCTGCGCCGCAAGCTGGCGCCCGAGGCGGTGAGCAGCGAGCGGGGGC
GGGGGTACCGGGTGGAGCGATGA

Upstream 100 bases:

>100_bases
CAGTGTAGCAGAGGAAAGAACGGGCCTGATCTTCCTCACTTCTCTTGCACCCCACCTGCTCGCATCCCACCTGCGAGACC
GCGCCCTCTAGACTGGCCCC

Downstream 100 bases:

>100_bases
GGCCACGGGGGATTCGTCTGGCCTTCCCGCTGACCCTGCGTGCTCAGCTCGCCTGGTGGGCTGCCTTGGCGACAGCGTTG
GCGGTGGCGCTGGTGGCCGC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLLLVEDDPRIAEPTLEALREAGYAVTWRQTGPAGLEEALLGEYPLIVLDVMLPGMDGFAVARELRAANVAGAILFLTA
RGELEDRVQGLDLGGDAYLVKPFAVPELLATLRALTRRERGQGAPRVAFAGGRGRLDTVARTVTWDGEEVAVTGREYALL
EVLVLSPDRWFTREELLDRVWGPEFGGEARIVDVYVRYLRRKLAPEAVSSERGRGYRVER

Sequences:

>Translated_220_residues
MRLLLVEDDPRIAEPTLEALREAGYAVTWRQTGPAGLEEALLGEYPLIVLDVMLPGMDGFAVARELRAANVAGAILFLTA
RGELEDRVQGLDLGGDAYLVKPFAVPELLATLRALTRRERGQGAPRVAFAGGRGRLDTVARTVTWDGEEVAVTGREYALL
EVLVLSPDRWFTREELLDRVWGPEFGGEARIVDVYVRYLRRKLAPEAVSSERGRGYRVER
>Mature_220_residues
MRLLLVEDDPRIAEPTLEALREAGYAVTWRQTGPAGLEEALLGEYPLIVLDVMLPGMDGFAVARELRAANVAGAILFLTA
RGELEDRVQGLDLGGDAYLVKPFAVPELLATLRALTRRERGQGAPRVAFAGGRGRLDTVARTVTWDGEEVAVTGREYALL
EVLVLSPDRWFTREELLDRVWGPEFGGEARIVDVYVRYLRRKLAPEAVSSERGRGYRVER

Specific function: Member of the two-component regulatory system ArlS/ArlR [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=39.3805309734513, Blast_Score=149, Evalue=1e-37,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=38.1818181818182, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789402, Length=218, Percent_Identity=38.5321100917431, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=35.6164383561644, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1790552, Length=216, Percent_Identity=35.6481481481481, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=35.8744394618834, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1789809, Length=227, Percent_Identity=34.3612334801762, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=32.8888888888889, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1786911, Length=221, Percent_Identity=35.7466063348416, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=33.3333333333333, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1787375, Length=225, Percent_Identity=27.5555555555556, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=32.8947368421053, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=32.034632034632, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=29.5652173913043, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790437, Length=158, Percent_Identity=28.4810126582279, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24404; Mature: 24404

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLVEDDPRIAEPTLEALREAGYAVTWRQTGPAGLEEALLGEYPLIVLDVMLPGMDGF
CEEEEECCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCHHEEEHHHCCCCHH
AVARELRAANVAGAILFLTARGELEDRVQGLDLGGDAYLVKPFAVPELLATLRALTRRER
HHHHHHHHHHHCEEEEEEEECCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
GQGAPRVAFAGGRGRLDTVARTVTWDGEEVAVTGREYALLEVLVLSPDRWFTREELLDRV
CCCCCEEEEECCCCCHHHHHEEEEECCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHH
WGPEFGGEARIVDVYVRYLRRKLAPEAVSSERGRGYRVER
CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRLLLVEDDPRIAEPTLEALREAGYAVTWRQTGPAGLEEALLGEYPLIVLDVMLPGMDGF
CEEEEECCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCHHEEEHHHCCCCHH
AVARELRAANVAGAILFLTARGELEDRVQGLDLGGDAYLVKPFAVPELLATLRALTRRER
HHHHHHHHHHHCEEEEEEEECCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHH
GQGAPRVAFAGGRGRLDTVARTVTWDGEEVAVTGREYALLEVLVLSPDRWFTREELLDRV
CCCCCEEEEECCCCCHHHHHEEEEECCCEEEEECCCEEEEEEEEECCCCCCCHHHHHHHH
WGPEFGGEARIVDVYVRYLRRKLAPEAVSSERGRGYRVER
CCCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA