Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94986311

Identifier: 94986311

GI number: 94986311

Start: 2332553

End: 2332789

Strand: Reverse

Name: 94986311

Synonym: Dgeo_2212

Alternate gene names: NA

Gene position: 2332789-2332553 (Counterclockwise)

Preceding gene: 94986312

Following gene: 94986310

Centisome position: 94.55

GC content: 63.29

Gene sequence:

>237_bases
ATGCCTCATGTCATTACCAGTCCCTGCATCGGTGTGAAGGATCAGGCCTGCACCGAAGTCTGCCCCGTGGAGTGCATCTA
CGATGGCGGCGACCAGTTCGTGATTCACCCCGACGAGTGCATCGACTGCGGCGCCTGCGTGCCCGCCTGCCCGGTGAGCG
CGATCTTCCCGGAGGAAGACGTCCCCGCGGGCGAGGAAGAGTTCACCCTCAAGAACCGCGCCTTCTTCGGGCTGTAA

Upstream 100 bases:

>100_bases
CCTGCACTCGGATTTTTGGCGTCTACGCCGGCAAAATACGGTCTAAGTTTTGAGGGATCTGGCCTTGTCACACCTGGGGG
GGGTGTGCATACTGTGCCCC

Downstream 100 bases:

>100_bases
CGCCCTTTGCCTGTCCCCGGCCCCGGCTGCCGGGGCGCTCTTTGCTTTGGTCCCTTGCCCCACGCCTGCTTCGCCGCTAG
GATGGCGAGGCTGGCGTGCT

Product: 4Fe-4S ferredoxin, iron-sulfur binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 77

Protein sequence:

>78_residues
MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEEDVPAGEEEFTLKNRAFFGL

Sequences:

>Translated_78_residues
MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEEDVPAGEEEFTLKNRAFFGL
>Mature_77_residues
PHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEEDVPAGEEEFTLKNRAFFGL

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR000813 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 8376; Mature: 8244

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
11.5 %Cys+Met (Translated Protein)
10.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCCC
VPAGEEEFTLKNRAFFGL
CCCCCCCEEECCEEECCC
>Mature Secondary Structure 
PHVITSPCIGVKDQACTEVCPVECIYDGGDQFVIHPDECIDCGACVPACPVSAIFPEED
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEECCHHHCCCCCCCCCCCCCCCCCCCC
VPAGEEEFTLKNRAFFGL
CCCCCCCEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7225412; 11681700; 6313685 [H]