| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94986309
Identifier: 94986309
GI number: 94986309
Start: 2330575
End: 2331276
Strand: Reverse
Name: 94986309
Synonym: Dgeo_2210
Alternate gene names: NA
Gene position: 2331276-2330575 (Counterclockwise)
Preceding gene: 94986310
Following gene: 94986308
Centisome position: 94.49
GC content: 68.38
Gene sequence:
>702_bases ATGACAGATCCCCGGCAAGGTACCCGTTTCGGCGTCTACCTCTGTCCCCCGGCGGGCGACCCGTACTACGCGCTGGGGAG CAAACTGCTCGGCTTTGACGTGCGTGCGGGGCGCGCGGTAGCGCTGCCGGACTTCCTGCGCCCCGAGTGGCAGGCGGACG CGGGGCCATATGGGCTGCATCTGACGGTTGTGGAGGGGTTCTACACCAATCCGGCGTGGTGGCCAGAGATCGAGGCGGAG GTGCGGGCCTGTCTCGCCTGTCTGCTGCCGGACACGGTCCTCACCCTGACGGCGGGGCGGGTCGAAGCCTGGGACAACGG GGAAACCTGGGTGCATCGCTTGAACGCGAATGAACCGCTGCTGGTGCTGCACACGCTGCTGCTTGCGCGCCTGGCCCGCT TCGTCACCGCCTCGCCCTTTGAAGCACCGGTGGTGGCGGGAAAGTACGCGCAGCCCTTTGAGCAGGCCCGTCTGCGCCTC CTCCACACCCCGCGGGGCCTGGATTCGTGGAAGCCGCACTTCACGTTGGTGCAGCCCTATGGCGGCGCTGACCCGGAGGG ACTGCGGGCCTGCCTGACGGCCCTCACGTCACCCCATCACGTGCAGACGTACCGTTCGGTTGCCCTCTTTGAGAAGCGCG AGGGAGAGGTGCGCTGGCGGGTGCGGGCGGACTTCTCCCTCGCTCCCCCCCAAACGGCGTGA
Upstream 100 bases:
>100_bases CCGCTGGCGGGTGTTTTGAAGGCGCGCTCATAGCAGGTCGGGGCAGGGCAGGTCGGGGCGGGGCACCTTGCTGCTGCGCT CCCAGAAAGGGCAGGCAACG
Downstream 100 bases:
>100_bases CCCTCTCGCGCTGAGGCCGCGCCTCCCCTACACTCGGCGAGTGACGAGGAACGCTGGAACAGGCGAGAACGGAATGCGGG TGGTCGTGGCGACCGGAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 232
Protein sequence:
>233_residues MTDPRQGTRFGVYLCPPAGDPYYALGSKLLGFDVRAGRAVALPDFLRPEWQADAGPYGLHLTVVEGFYTNPAWWPEIEAE VRACLACLLPDTVLTLTAGRVEAWDNGETWVHRLNANEPLLVLHTLLLARLARFVTASPFEAPVVAGKYAQPFEQARLRL LHTPRGLDSWKPHFTLVQPYGGADPEGLRACLTALTSPHHVQTYRSVALFEKREGEVRWRVRADFSLAPPQTA
Sequences:
>Translated_233_residues MTDPRQGTRFGVYLCPPAGDPYYALGSKLLGFDVRAGRAVALPDFLRPEWQADAGPYGLHLTVVEGFYTNPAWWPEIEAE VRACLACLLPDTVLTLTAGRVEAWDNGETWVHRLNANEPLLVLHTLLLARLARFVTASPFEAPVVAGKYAQPFEQARLRL LHTPRGLDSWKPHFTLVQPYGGADPEGLRACLTALTSPHHVQTYRSVALFEKREGEVRWRVRADFSLAPPQTA >Mature_232_residues TDPRQGTRFGVYLCPPAGDPYYALGSKLLGFDVRAGRAVALPDFLRPEWQADAGPYGLHLTVVEGFYTNPAWWPEIEAEV RACLACLLPDTVLTLTAGRVEAWDNGETWVHRLNANEPLLVLHTLLLARLARFVTASPFEAPVVAGKYAQPFEQARLRLL HTPRGLDSWKPHFTLVQPYGGADPEGLRACLTALTSPHHVQTYRSVALFEKREGEVRWRVRADFSLAPPQTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25940; Mature: 25809
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPRQGTRFGVYLCPPAGDPYYALGSKLLGFDVRAGRAVALPDFLRPEWQADAGPYGLH CCCCCCCCEEEEEEECCCCCCHHHHCCHHEEEECCCCCEEECCHHHCCCCCCCCCCCEEE LTVVEGFYTNPAWWPEIEAEVRACLACLLPDTVLTLTAGRVEAWDNGETWVHRLNANEPL EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCEEECCCCCEEEEEECCCCCH LVLHTLLLARLARFVTASPFEAPVVAGKYAQPFEQARLRLLHTPRGLDSWKPHFTLVQPY HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHEECCCCCCCCCCCCCEEEECCC GGADPEGLRACLTALTSPHHVQTYRSVALFEKREGEVRWRVRADFSLAPPQTA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure TDPRQGTRFGVYLCPPAGDPYYALGSKLLGFDVRAGRAVALPDFLRPEWQADAGPYGLH CCCCCCCEEEEEEECCCCCCHHHHCCHHEEEECCCCCEEECCHHHCCCCCCCCCCCEEE LTVVEGFYTNPAWWPEIEAEVRACLACLLPDTVLTLTAGRVEAWDNGETWVHRLNANEPL EEEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHEEEECCCEEECCCCCEEEEEECCCCCH LVLHTLLLARLARFVTASPFEAPVVAGKYAQPFEQARLRLLHTPRGLDSWKPHFTLVQPY HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHEECCCCCCCCCCCCCEEEECCC GGADPEGLRACLTALTSPHHVQTYRSVALFEKREGEVRWRVRADFSLAPPQTA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA