Click here to switch to the map view.

The map label for this gene is yhcV [H]

Identifier: 94986179

GI number: 94986179

Start: 2190079

End: 2190504

Strand: Reverse

Name: yhcV [H]

Synonym: Dgeo_2080

Alternate gene names: 94986179

Gene position: 2190504-2190079 (Counterclockwise)

Preceding gene: 94986180

Following gene: 94986174

Centisome position: 88.78

GC content: 66.2

Gene sequence:

>426_bases
ATGCCGACACTCAGAGACATCATGACGCCCGATCCCGTGACTGTGGATCCGCTGGCGACCCTCAAGGAAGTTGCGACGCT
GATGCTGGAGCAGGACATCGGCGCGGTCCTGGTGATGGAGCATGACCGGCCTACCGGCATCATCACCGACCGCGACATCG
TGATTCGAGCGGTGGCCTACGGGCACGACCCCGGCACGGCCGTCACCGATTACACCACCGGGGACGTGTTTACGCTGGAC
GCGGAGACCGATGTCGAGGACGCTGCCCGCGAGATGGCCGCGCGGCAATTGCGCCGCATCCCGGTTACTGAGCATGGCCG
CGTGGTCGGGATGGTCAGCCTGGGCGACCTGGCGAACCGCACAGTGGGTGGGTTGGATCAGGAGGCCCTGGAGGGCATCA
GCGTGCCGACCCCCACCGATCGCTGA

Upstream 100 bases:

>100_bases
AGAGGAGAGGGGAAGGGCCACAGGTGCGCGGCTTCCCCTCTCTCTGTCTGTCTTTAGCTCGTTCCTATCGAGAGAAAAGG
TGGGCAGGCTACGGTGGGTC

Downstream 100 bases:

>100_bases
GCTGAGGACCGCCAGAAGTGCCGGGCGGTCCTTTGTCTGGGGGCTGCTCACCAGGTTGGGTTCTTCCGCGAGGAGACGCA
GGTCATCCTCGGCGTTGCTG

Product: signal-transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MPTLRDIMTPDPVTVDPLATLKEVATLMLEQDIGAVLVMEHDRPTGIITDRDIVIRAVAYGHDPGTAVTDYTTGDVFTLD
AETDVEDAAREMAARQLRRIPVTEHGRVVGMVSLGDLANRTVGGLDQEALEGISVPTPTDR

Sequences:

>Translated_141_residues
MPTLRDIMTPDPVTVDPLATLKEVATLMLEQDIGAVLVMEHDRPTGIITDRDIVIRAVAYGHDPGTAVTDYTTGDVFTLD
AETDVEDAAREMAARQLRRIPVTEHGRVVGMVSLGDLANRTVGGLDQEALEGISVPTPTDR
>Mature_140_residues
PTLRDIMTPDPVTVDPLATLKEVATLMLEQDIGAVLVMEHDRPTGIITDRDIVIRAVAYGHDPGTAVTDYTTGDVFTLDA
ETDVEDAAREMAARQLRRIPVTEHGRVVGMVSLGDLANRTVGGLDQEALEGISVPTPTDR

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 15206; Mature: 15075

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLRDIMTPDPVTVDPLATLKEVATLMLEQDIGAVLVMEHDRPTGIITDRDIVIRAVAY
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCEEEEEEEE
GHDPGTAVTDYTTGDVFTLDAETDVEDAAREMAARQLRRIPVTEHGRVVGMVSLGDLANR
CCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHH
TVGGLDQEALEGISVPTPTDR
CCCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PTLRDIMTPDPVTVDPLATLKEVATLMLEQDIGAVLVMEHDRPTGIITDRDIVIRAVAY
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEECCCEEEEEEEE
GHDPGTAVTDYTTGDVFTLDAETDVEDAAREMAARQLRRIPVTEHGRVVGMVSLGDLANR
CCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHH
TVGGLDQEALEGISVPTPTDR
CCCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]