Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94986117

Identifier: 94986117

GI number: 94986117

Start: 2129334

End: 2129759

Strand: Reverse

Name: 94986117

Synonym: Dgeo_2018

Alternate gene names: NA

Gene position: 2129759-2129334 (Counterclockwise)

Preceding gene: 94986118

Following gene: 94986116

Centisome position: 86.32

GC content: 63.38

Gene sequence:

>426_bases
ATGGGCTGCCCGCCTATGCTTGGGCAAATGCCCTCGCAATTCCCTGTTCGGCAGGTGGGTCTGGCCGTCCTCCTGAGCAG
TGCTGCCCTGGCTGGCGCCGCCACCTTTCAGCTTGACGGTCTGCTCGCTGTGTATGACAGTCCCTCACCCTGCCTGAGTG
TCGCCGTGAAGGTGTACGAGGGCAGCCAGCTCAGAGCCCAGGTGGCCGTGTTGCCGAATGGACAAGTCAAACCGGTGGGC
GGCGCCAATGCCCCGCTGCCCCGCTTTGAAAAGGGCCACACCTACAACCTGCAGGCCACCTGCCTGGCAAAAGACAACGC
CACCTTCCAGAACTCCGAGCTGACCTTTCAGGCCGACGGCCACACCGTGATGCTGGCCTTTACCAAATCGGGCTTTCAGT
TCCGGCGCGGCGGCCTGGCCTACTGA

Upstream 100 bases:

>100_bases
GCGCCTACGCCAAAAAATACAGCCGTTGCCTCAGCCGCCTCTCGGAACTGTTGCGCGAGGCGCGAGCCGAACTTTAAAAA
GCGTGCTGTAAGAAGACTGC

Downstream 100 bases:

>100_bases
TGCAGCAAAAAACCGCGCCTGAGCGCGGCGGTGGTGCCGAGAGCGGGACTTGAACCCGCATGCCCTTGCGGGCGTTCGAT
TTTAAGTCGAATGCGTCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGCPPMLGQMPSQFPVRQVGLAVLLSSAALAGAATFQLDGLLAVYDSPSPCLSVAVKVYEGSQLRAQVAVLPNGQVKPVG
GANAPLPRFEKGHTYNLQATCLAKDNATFQNSELTFQADGHTVMLAFTKSGFQFRRGGLAY

Sequences:

>Translated_141_residues
MGCPPMLGQMPSQFPVRQVGLAVLLSSAALAGAATFQLDGLLAVYDSPSPCLSVAVKVYEGSQLRAQVAVLPNGQVKPVG
GANAPLPRFEKGHTYNLQATCLAKDNATFQNSELTFQADGHTVMLAFTKSGFQFRRGGLAY
>Mature_140_residues
GCPPMLGQMPSQFPVRQVGLAVLLSSAALAGAATFQLDGLLAVYDSPSPCLSVAVKVYEGSQLRAQVAVLPNGQVKPVGG
ANAPLPRFEKGHTYNLQATCLAKDNATFQNSELTFQADGHTVMLAFTKSGFQFRRGGLAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14860; Mature: 14729

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCPPMLGQMPSQFPVRQVGLAVLLSSAALAGAATFQLDGLLAVYDSPSPCLSVAVKVYE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCHHHEEEEEEEC
GSQLRAQVAVLPNGQVKPVGGANAPLPRFEKGHTYNLQATCLAKDNATFQNSELTFQADG
CCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCEECEEEEEEECCCCCEECCEEEEEECC
HTVMLAFTKSGFQFRRGGLAY
CEEEEEEECCCCEECCCCCCC
>Mature Secondary Structure 
GCPPMLGQMPSQFPVRQVGLAVLLSSAALAGAATFQLDGLLAVYDSPSPCLSVAVKVYE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCEEEEECCCCHHHEEEEEEEC
GSQLRAQVAVLPNGQVKPVGGANAPLPRFEKGHTYNLQATCLAKDNATFQNSELTFQADG
CCCEEEEEEECCCCCEEECCCCCCCCCCCCCCCEECEEEEEEECCCCCEECCEEEEEECC
HTVMLAFTKSGFQFRRGGLAY
CEEEEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA