| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is celB [H]
Identifier: 94985975
GI number: 94985975
Start: 1971635
End: 1973278
Strand: Reverse
Name: celB [H]
Synonym: Dgeo_1875
Alternate gene names: 94985975
Gene position: 1973278-1971635 (Counterclockwise)
Preceding gene: 94985979
Following gene: 94985974
Centisome position: 79.98
GC content: 67.34
Gene sequence:
>1644_bases ATGACGCTGAGTCCTCTGGCCGGGAAAGTGGCCCCCCAAGCCCTTCTGACGAACGTTCCCCGCTTGGTCGCGTACTACTA CGAGAAGCGTCCAGACGTGAAAGATCCCGCGCAGCGCGTGGCGTTCGGGACCAGTGGGCACCGAGGGACTAGCCTGGACG GTTCCTTTAACGAGGCGCACATCCTGGCGATCAGTCAGGCGGTCGCTGAACACCGCGCAGCGGCGGGCATCACCGGACCG CTGTACATGGGCCTGGACACCCACGCCCTCAGCGAGCCCGCTTGGCTCAGTGCCCTCGAGGTGCTTGTCGCCAATGGCGT GCGGGTACGGGCACAGCCCGGCTTCTTCACGCCGACCCCCCTTGTCAGTCACGCGATTCTCAACCACAACCGCGCGGGCA CCGGTGACGTGGCAGATGGCATCGTCATCACACCCAGCCATAACCCTCCGCAGGACGGCGGCTTCAAATACAACCCGCCC TCGGGTGGCCCGGCCGACACCGACATCACCCGAGCGGTGCAGAACCGGGCCAACGAGCTGCTGGCAAGCGGCCTGCAAAG CGTGAAGCGTGTGCCGCTGGAGGAGGCGCTGGCGGCCCTCGACCCCTTCGACTTCGTCACGCCGTATGTCTCCGAACTGG GTCAGGTGATCGACCTGGCGGCAATCCGGGCGGCGGGCGTGCGGATCGGTGTGGACCCGCTCGGCGGTTCCAGCCTGCCC GTGTGGGAGGCCATCCGCGACCTGCACGGGCTGAATCTCAGTATCGTGAATGAGCGGATCGACCCACAGTTTGCCTTTAT GGCGGTGGACAAGGACGGCAAGATCCGAATGGACTGCTCGAGTCCCTACGCGATGGCGGGCCTGCTGCGGCTCCGGGACG ACTTCGACGTGGCGATTGGCAATGACCCTGACGCCGATCGCCACGGCGTTGTAACCGCAAGTGGCCTGATGAACCCCAAC CACTACCTCGCCGTGATGATCGATTACCTCTTTCAGCATCGGCCCGGCTGGCGTGCCGAAGCGGGTGTGGGCAAGACGGT GGTGTCGAGTGCGCTCATCGACCGGGTGGCGGCGGGCCTGGGGCGGCGGCTCGTCGAGGTGCCCGTCGGCTTCAAGTACT TCGTGGAGGGCCTGCTGTCCGGCTCGCTGGGCTTTGGCGGCGAGGAGTCAGCGGGCGCGAGCTTCCTGCGGCTGGACGGG AGGGCCTGGAGCACCGACAAGGACGGGATCATCGCGGGCCTGCTGGCCGCCGAGATCACCGCCAGGACCGGTCAGACGCC CAGCCAGCGGTTTGCCGCGCTGACGGAGCGGTACGGCGAAACCGCCTATGCCCGCGAGGACGCACCCGCCAATGCTGCTC AGAAAAGGGTGCTCGCCCATCTCAGCCCCGAACAGGTGACCGCCACCACGCTGGCGGGCGACCCGATCACGGCCAAGCTC ACGCGGGCGCCCGGCAACGGCGAACCCATCGGTGGCCTGAAGGTGACCACCGACGCCGCCTGGTTTGCCGCCCGGCCCAG CGGCACCGAGGACGTCTACAAGATCTACGCCGAGAGCTTTAAGGGCGCGGCCCATCTGCGTGAGGTGCTGGCCGAGGCGC GCGAAGTCGTTGACGCCGCTTTCCGGGTGGGAGGGGCCGAGTGA
Upstream 100 bases:
>100_bases GAAGCGCAGAAGCCGGTGTCCGGGGGCGATGACGTGCATGAGGCGGGCCTGAAGAGGGGCGCGGTTCTGCTTTGTGCCCC AAGCTGCTTACACTGCCCCC
Downstream 100 bases:
>100_bases GCCTTCCGGAAGAACACACCGTCATCACCCGCGAGGAGATCACGGGGGTCGAGTTCGACTGGTTTGCGACCGATGAGCAG GGACAGGTGGCACAGTTTCT
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MTLSPLAGKVAPQALLTNVPRLVAYYYEKRPDVKDPAQRVAFGTSGHRGTSLDGSFNEAHILAISQAVAEHRAAAGITGP LYMGLDTHALSEPAWLSALEVLVANGVRVRAQPGFFTPTPLVSHAILNHNRAGTGDVADGIVITPSHNPPQDGGFKYNPP SGGPADTDITRAVQNRANELLASGLQSVKRVPLEEALAALDPFDFVTPYVSELGQVIDLAAIRAAGVRIGVDPLGGSSLP VWEAIRDLHGLNLSIVNERIDPQFAFMAVDKDGKIRMDCSSPYAMAGLLRLRDDFDVAIGNDPDADRHGVVTASGLMNPN HYLAVMIDYLFQHRPGWRAEAGVGKTVVSSALIDRVAAGLGRRLVEVPVGFKYFVEGLLSGSLGFGGEESAGASFLRLDG RAWSTDKDGIIAGLLAAEITARTGQTPSQRFAALTERYGETAYAREDAPANAAQKRVLAHLSPEQVTATTLAGDPITAKL TRAPGNGEPIGGLKVTTDAAWFAARPSGTEDVYKIYAESFKGAAHLREVLAEAREVVDAAFRVGGAE
Sequences:
>Translated_547_residues MTLSPLAGKVAPQALLTNVPRLVAYYYEKRPDVKDPAQRVAFGTSGHRGTSLDGSFNEAHILAISQAVAEHRAAAGITGP LYMGLDTHALSEPAWLSALEVLVANGVRVRAQPGFFTPTPLVSHAILNHNRAGTGDVADGIVITPSHNPPQDGGFKYNPP SGGPADTDITRAVQNRANELLASGLQSVKRVPLEEALAALDPFDFVTPYVSELGQVIDLAAIRAAGVRIGVDPLGGSSLP VWEAIRDLHGLNLSIVNERIDPQFAFMAVDKDGKIRMDCSSPYAMAGLLRLRDDFDVAIGNDPDADRHGVVTASGLMNPN HYLAVMIDYLFQHRPGWRAEAGVGKTVVSSALIDRVAAGLGRRLVEVPVGFKYFVEGLLSGSLGFGGEESAGASFLRLDG RAWSTDKDGIIAGLLAAEITARTGQTPSQRFAALTERYGETAYAREDAPANAAQKRVLAHLSPEQVTATTLAGDPITAKL TRAPGNGEPIGGLKVTTDAAWFAARPSGTEDVYKIYAESFKGAAHLREVLAEAREVVDAAFRVGGAE >Mature_546_residues TLSPLAGKVAPQALLTNVPRLVAYYYEKRPDVKDPAQRVAFGTSGHRGTSLDGSFNEAHILAISQAVAEHRAAAGITGPL YMGLDTHALSEPAWLSALEVLVANGVRVRAQPGFFTPTPLVSHAILNHNRAGTGDVADGIVITPSHNPPQDGGFKYNPPS GGPADTDITRAVQNRANELLASGLQSVKRVPLEEALAALDPFDFVTPYVSELGQVIDLAAIRAAGVRIGVDPLGGSSLPV WEAIRDLHGLNLSIVNERIDPQFAFMAVDKDGKIRMDCSSPYAMAGLLRLRDDFDVAIGNDPDADRHGVVTASGLMNPNH YLAVMIDYLFQHRPGWRAEAGVGKTVVSSALIDRVAAGLGRRLVEVPVGFKYFVEGLLSGSLGFGGEESAGASFLRLDGR AWSTDKDGIIAGLLAAEITARTGQTPSQRFAALTERYGETAYAREDAPANAAQKRVLAHLSPEQVTATTLAGDPITAKLT RAPGNGEPIGGLKVTTDAAWFAARPSGTEDVYKIYAESFKGAAHLREVLAEAREVVDAAFRVGGAE
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Escherichia coli, GI1786904, Length=545, Percent_Identity=61.8348623853211, Blast_Score=668, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=399, Percent_Identity=27.5689223057644, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6322722, Length=472, Percent_Identity=27.1186440677966, Blast_Score=92, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323752, Length=478, Percent_Identity=24.8953974895398, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI17864244, Length=416, Percent_Identity=26.9230769230769, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 57905; Mature: 57774
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSPLAGKVAPQALLTNVPRLVAYYYEKRPDVKDPAQRVAFGTSGHRGTSLDGSFNEAH CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHH ILAISQAVAEHRAAAGITGPLYMGLDTHALSEPAWLSALEVLVANGVRVRAQPGFFTPTP HHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCHHHHHHHHHHHCCEEEEECCCCCCCCH LVSHAILNHNRAGTGDVADGIVITPSHNPPQDGGFKYNPPSGGPADTDITRAVQNRANEL HHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH LASGLQSVKRVPLEEALAALDPFDFVTPYVSELGQVIDLAAIRAAGVRIGVDPLGGSSLP HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC VWEAIRDLHGLNLSIVNERIDPQFAFMAVDKDGKIRMDCSSPYAMAGLLRLRDDFDVAIG HHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCEEEC NDPDADRHGVVTASGLMNPNHYLAVMIDYLFQHRPGWRAEAGVGKTVVSSALIDRVAAGL CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH GRRLVEVPVGFKYFVEGLLSGSLGFGGEESAGASFLRLDGRAWSTDKDGIIAGLLAAEIT CCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH ARTGQTPSQRFAALTERYGETAYAREDAPANAAQKRVLAHLSPEQVTATTLAGDPITAKL HCCCCCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEE TRAPGNGEPIGGLKVTTDAAWFAARPSGTEDVYKIYAESFKGAAHLREVLAEAREVVDAA EECCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FRVGGAE HHCCCCC >Mature Secondary Structure TLSPLAGKVAPQALLTNVPRLVAYYYEKRPDVKDPAQRVAFGTSGHRGTSLDGSFNEAH CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHH ILAISQAVAEHRAAAGITGPLYMGLDTHALSEPAWLSALEVLVANGVRVRAQPGFFTPTP HHHHHHHHHHHHHHCCCCCCEEECCCHHHCCCCHHHHHHHHHHHCCEEEEECCCCCCCCH LVSHAILNHNRAGTGDVADGIVITPSHNPPQDGGFKYNPPSGGPADTDITRAVQNRANEL HHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHH LASGLQSVKRVPLEEALAALDPFDFVTPYVSELGQVIDLAAIRAAGVRIGVDPLGGSSLP HHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCC VWEAIRDLHGLNLSIVNERIDPQFAFMAVDKDGKIRMDCSSPYAMAGLLRLRDDFDVAIG HHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHHHCCCCCEEEC NDPDADRHGVVTASGLMNPNHYLAVMIDYLFQHRPGWRAEAGVGKTVVSSALIDRVAAGL CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHH GRRLVEVPVGFKYFVEGLLSGSLGFGGEESAGASFLRLDGRAWSTDKDGIIAGLLAAEIT CCCHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHH ARTGQTPSQRFAALTERYGETAYAREDAPANAAQKRVLAHLSPEQVTATTLAGDPITAKL HCCCCCHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCEEEE TRAPGNGEPIGGLKVTTDAAWFAARPSGTEDVYKIYAESFKGAAHLREVLAEAREVVDAA EECCCCCCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FRVGGAE HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8025683 [H]