| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985974
Identifier: 94985974
GI number: 94985974
Start: 1971177
End: 1971638
Strand: Reverse
Name: 94985974
Synonym: Dgeo_1874
Alternate gene names: NA
Gene position: 1971638-1971177 (Counterclockwise)
Preceding gene: 94985975
Following gene: 94985973
Centisome position: 79.91
GC content: 66.02
Gene sequence:
>462_bases GTGAGCCTTCCGGAAGAACACACCGTCATCACCCGCGAGGAGATCACGGGGGTCGAGTTCGACTGGTTTGCGACCGATGA GCAGGGACAGGTGGCACAGTTTCTCGCTGCTGGAGATCCGCACGTTCCTGCGGCGGCCCTCGCCTCTGAAGAACGCCTTG AAGCGCTCCACGTTTGGATCGATACCCGTCCGGAAAGGGAGGCCCCCAACGCCCCAGCGGGCGGCTTTGACGAACACCTC ACATCGCCGCAGCGCCGGGGGGCCTACGTCTACGACCACGTGCCGGGTGAGGCGGGAATGTACCGGCTGGTGGCGGCGCC GCGTCACCCGCTGCACCTCTCAGACCTTCCTGCGAAACTGCGCACCTATCTGGAGACCATCCGCCTGCCTGTCGCCTTTG GCACGGCCCGGGTGCGTGTCTTTGAGGACGGGCACGCCGAGGCTGACAGCGCCTCGTCCTGA
Upstream 100 bases:
>100_bases AGATCTACGCCGAGAGCTTTAAGGGCGCGGCCCATCTGCGTGAGGTGCTGGCCGAGGCGCGCGAAGTCGTTGACGCCGCT TTCCGGGTGGGAGGGGCCGA
Downstream 100 bases:
>100_bases AGGAGCTGCCGGCGTTGCCCTCCGGCATCCTTGCGCTGACCCCCCCTCACGCGGTATGCTACTGCGGTTGAAAACTGCCC GGTATGGGTTGCACCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSLPEEHTVITREEITGVEFDWFATDEQGQVAQFLAAGDPHVPAAALASEERLEALHVWIDTRPEREAPNAPAGGFDEHL TSPQRRGAYVYDHVPGEAGMYRLVAAPRHPLHLSDLPAKLRTYLETIRLPVAFGTARVRVFEDGHAEADSASS
Sequences:
>Translated_153_residues MSLPEEHTVITREEITGVEFDWFATDEQGQVAQFLAAGDPHVPAAALASEERLEALHVWIDTRPEREAPNAPAGGFDEHL TSPQRRGAYVYDHVPGEAGMYRLVAAPRHPLHLSDLPAKLRTYLETIRLPVAFGTARVRVFEDGHAEADSASS >Mature_152_residues SLPEEHTVITREEITGVEFDWFATDEQGQVAQFLAAGDPHVPAAALASEERLEALHVWIDTRPEREAPNAPAGGFDEHLT SPQRRGAYVYDHVPGEAGMYRLVAAPRHPLHLSDLPAKLRTYLETIRLPVAFGTARVRVFEDGHAEADSASS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16850; Mature: 16719
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPEEHTVITREEITGVEFDWFATDEQGQVAQFLAAGDPHVPAAALASEERLEALHVWI CCCCCCCEEEEHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEE DTRPEREAPNAPAGGFDEHLTSPQRRGAYVYDHVPGEAGMYRLVAAPRHPLHLSDLPAKL CCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCHHH RTYLETIRLPVAFGTARVRVFEDGHAEADSASS HHHHHHHHCCEEECCEEEEEEECCCCCCCCCCC >Mature Secondary Structure SLPEEHTVITREEITGVEFDWFATDEQGQVAQFLAAGDPHVPAAALASEERLEALHVWI CCCCCCEEEEHHHCCCCEEEEEECCCCCHHHHHHHCCCCCCCHHHHHHHHHHEEEEEEE DTRPEREAPNAPAGGFDEHLTSPQRRGAYVYDHVPGEAGMYRLVAAPRHPLHLSDLPAKL CCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCHHH RTYLETIRLPVAFGTARVRVFEDGHAEADSASS HHHHHHHHCCEEECCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA