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The map label for this gene is dppA [C]

Identifier: 94985444

GI number: 94985444

Start: 1430551

End: 1432467

Strand: Reverse

Name: dppA [C]

Synonym: Dgeo_1344

Alternate gene names: 94985444

Gene position: 1432467-1430551 (Counterclockwise)

Preceding gene: 94985445

Following gene: 94985443

Centisome position: 58.06

GC content: 60.35

Gene sequence:

>1917_bases
ATGGCAAAAAATCGCTTGACCTCTCTAGATCCTGTCCCTATAGTGACCGCGCTGGAATCCCACATAGTCCGTATGAGCCG
CCCTCAGTGCGTCTCGGAGCGGGTCATATGTTCCAGACTTAGGAGGCATATGAAGAAGTTTGCGTTTCTGGCTGCTGCCC
TGACGCTTGCCACTGCAGGCGCAAAACCCTACGTGGCACCCGCGAACCAGACAGTGGCCGCGCCGAGCAACAACGACATG
GGCGGTGTGCTCCGGCTGGTGCAGCTCAAGGACTTCGACACCTATAACCCACTGGTCGCACAGGGCCGTCCCAACATTCC
TGAACTGGTGAGTGGGGCGGCGCTGATCACACCGGACCCCTACACCTACGAGTATGTTCCTGCAGCGGCGGAAAGCTACA
CCATTTCGCCCGACAAGCGGACCTATACCTTCACACTGCGCCCTGAGCTGAAGTGGAGTGATGGCCAGGCGATCACCGCC
GATGACTACATCTCGACCTTTGAGATCTACTCGAAGGACGAGGATGCTAACCTCAACGCCTATCTCTTCGACAACGGCAA
GCCGGTGACTTGGAAGAAGCTGGGGGATCTGAAGTTTTCCGTGACGTTCCCCCGCGCGACGGTCCAAAACACCGAAACGG
TCTCCTATTTCACGCCGCTGCCTGACCATATCTTCGGGGCGACCTACCGCAAGGCGGGCGGCGGCGCGGCGGGCATCAAG
GCTGTGCGGGCGCTGTGGGACCTCAACACCGATCCCAGCAAGATTGTGAGCGCGGGGCCATTCAAGGTCGGCAGCTACAA
GCGCGGCGAGCGTCTGAACCTGGTCAAGAACCCGTACTACGGCCAGTGGAACAAAGACAGCCAGGGCCGGCCCCTGCCCT
ACCTCGATGGACTGCAGTACAACATCGTTCCTGACCAGAATGCTGCTCTCGCGCAGTTCCTGGCGGGCAACACCGACCTG
TTCTCGCCCAGCAACCGTGACCAGCTCGCCCAGGTGGTGGCGGCCAAGAACAGCGGCAAACTGAAGGTGGACGTGCTGGC
GAACGCGGGGCCCAACGCCAGCGTTGATTTCCTGTACTTCAACTGGAACAAGGCCAGCGATCCCTTTAAGCAGCAGCTTT
TCCGCAACACCAAGTTCCGCCAGGCGATGAGCATGCTGGTGAACAAGGACGCGATGATCGACCAGGTGATGGGCGGTCTC
GCGGTGCCGGCCTGGACCAGCGTGTATCCGCTGTACAGCGAGTGGGTTGCGCCGAACGTCGACAAGTACAAGTACAACCC
GGCTGCTGCCAACAAGCTGCTCGACGAGCTTGGCTTCAAGAAGCGCGGTGCTGACGGGATCCGTGTGGACAGCAAGGGCA
ATCGCCTGTCGTTTACGCTGCTTACCAACTCCGAGAACAACCGCCGTCAGCAGCTCGCGCGCCTCTTTGCGGACGAGGCC
AAGAAGGCCGGCGTTGAAGTCAAGACCAACTTTATTCCCTTCAACCAGCTTCTCGACATTGCCTACCCGGAAAGTGACGC
GGCCAAGCTCGACCGCAAGTTCGATGCGGCGATCACGGGTCTTGGGGGTGGCGGCTTCATCAACCCGGTGGGTGTGGCCT
CGCTGCTGACCTGCGGCGGCGACCTGAACGGCTACAACCAGTCCAAGAAGTGCATCCAGCCCTGGGAGACGCAGCAGGCC
AACCTCTTCTTCAAGAGCACGGCGGAGTTTGACCAGGCCAAGCGCAAGGCCATCGCCAACCAGATTCAGCAGCTGCAGGC
CAACAACCTGGGCTACATCTACCTGCTCAGCCCCAACGCGCACTATGCCTGGGATCAGCGGGTGCAGGGCGAGTATCCCA
AGAAGATCGCGACCCCGCTGTGGGCCAGCAGCTACTTCGGGCCGCGCAACATCGACCAGACCTGGATCAAGAAGTAA

Upstream 100 bases:

>100_bases
CGGTCCGGCCTGGACGCAGCGAGCATGGCTCCACGCCAACGGGGGTAGGACGCCTCTCAAGCTGACGGACGTGTGATGAA
CGAGTGATCAAAAGGCAAGA

Downstream 100 bases:

>100_bases
AGCGGACGGTTTGTAGACCTCCGCACCGCAACGCGAGGCCGCCGGGCCTCGCGTTCGCCCTGAAGGAGCAAGATAACCCC
ATGATTCCGTTTCTCCTCCG

Product: extracellular solute-binding protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 638; Mature: 637

Protein sequence:

>638_residues
MAKNRLTSLDPVPIVTALESHIVRMSRPQCVSERVICSRLRRHMKKFAFLAAALTLATAGAKPYVAPANQTVAAPSNNDM
GGVLRLVQLKDFDTYNPLVAQGRPNIPELVSGAALITPDPYTYEYVPAAAESYTISPDKRTYTFTLRPELKWSDGQAITA
DDYISTFEIYSKDEDANLNAYLFDNGKPVTWKKLGDLKFSVTFPRATVQNTETVSYFTPLPDHIFGATYRKAGGGAAGIK
AVRALWDLNTDPSKIVSAGPFKVGSYKRGERLNLVKNPYYGQWNKDSQGRPLPYLDGLQYNIVPDQNAALAQFLAGNTDL
FSPSNRDQLAQVVAAKNSGKLKVDVLANAGPNASVDFLYFNWNKASDPFKQQLFRNTKFRQAMSMLVNKDAMIDQVMGGL
AVPAWTSVYPLYSEWVAPNVDKYKYNPAAANKLLDELGFKKRGADGIRVDSKGNRLSFTLLTNSENNRRQQLARLFADEA
KKAGVEVKTNFIPFNQLLDIAYPESDAAKLDRKFDAAITGLGGGGFINPVGVASLLTCGGDLNGYNQSKKCIQPWETQQA
NLFFKSTAEFDQAKRKAIANQIQQLQANNLGYIYLLSPNAHYAWDQRVQGEYPKKIATPLWASSYFGPRNIDQTWIKK

Sequences:

>Translated_638_residues
MAKNRLTSLDPVPIVTALESHIVRMSRPQCVSERVICSRLRRHMKKFAFLAAALTLATAGAKPYVAPANQTVAAPSNNDM
GGVLRLVQLKDFDTYNPLVAQGRPNIPELVSGAALITPDPYTYEYVPAAAESYTISPDKRTYTFTLRPELKWSDGQAITA
DDYISTFEIYSKDEDANLNAYLFDNGKPVTWKKLGDLKFSVTFPRATVQNTETVSYFTPLPDHIFGATYRKAGGGAAGIK
AVRALWDLNTDPSKIVSAGPFKVGSYKRGERLNLVKNPYYGQWNKDSQGRPLPYLDGLQYNIVPDQNAALAQFLAGNTDL
FSPSNRDQLAQVVAAKNSGKLKVDVLANAGPNASVDFLYFNWNKASDPFKQQLFRNTKFRQAMSMLVNKDAMIDQVMGGL
AVPAWTSVYPLYSEWVAPNVDKYKYNPAAANKLLDELGFKKRGADGIRVDSKGNRLSFTLLTNSENNRRQQLARLFADEA
KKAGVEVKTNFIPFNQLLDIAYPESDAAKLDRKFDAAITGLGGGGFINPVGVASLLTCGGDLNGYNQSKKCIQPWETQQA
NLFFKSTAEFDQAKRKAIANQIQQLQANNLGYIYLLSPNAHYAWDQRVQGEYPKKIATPLWASSYFGPRNIDQTWIKK
>Mature_637_residues
AKNRLTSLDPVPIVTALESHIVRMSRPQCVSERVICSRLRRHMKKFAFLAAALTLATAGAKPYVAPANQTVAAPSNNDMG
GVLRLVQLKDFDTYNPLVAQGRPNIPELVSGAALITPDPYTYEYVPAAAESYTISPDKRTYTFTLRPELKWSDGQAITAD
DYISTFEIYSKDEDANLNAYLFDNGKPVTWKKLGDLKFSVTFPRATVQNTETVSYFTPLPDHIFGATYRKAGGGAAGIKA
VRALWDLNTDPSKIVSAGPFKVGSYKRGERLNLVKNPYYGQWNKDSQGRPLPYLDGLQYNIVPDQNAALAQFLAGNTDLF
SPSNRDQLAQVVAAKNSGKLKVDVLANAGPNASVDFLYFNWNKASDPFKQQLFRNTKFRQAMSMLVNKDAMIDQVMGGLA
VPAWTSVYPLYSEWVAPNVDKYKYNPAAANKLLDELGFKKRGADGIRVDSKGNRLSFTLLTNSENNRRQQLARLFADEAK
KAGVEVKTNFIPFNQLLDIAYPESDAAKLDRKFDAAITGLGGGGFINPVGVASLLTCGGDLNGYNQSKKCIQPWETQQAN
LFFKSTAEFDQAKRKAIANQIQQLQANNLGYIYLLSPNAHYAWDQRVQGEYPKKIATPLWASSYFGPRNIDQTWIKK

Specific function: Probably part of a binding-protein-dependent transport system [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789966, Length=473, Percent_Identity=23.4672304439746, Blast_Score=90, Evalue=4e-19,

Paralogues:

None

Copy number: 660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 70739; Mature: 70608

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNRLTSLDPVPIVTALESHIVRMSRPQCVSERVICSRLRRHMKKFAFLAAALTLATAG
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AKPYVAPANQTVAAPSNNDMGGVLRLVQLKDFDTYNPLVAQGRPNIPELVSGAALITPDP
CCCEECCCCCEEECCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEECCCC
YTYEYVPAAAESYTISPDKRTYTFTLRPELKWSDGQAITADDYISTFEIYSKDEDANLNA
CCEEEECCCCCCEEECCCCEEEEEEECCCEEECCCCEEECCCCCEEEEEECCCCCCCEEE
YLFDNGKPVTWKKLGDLKFSVTFPRATVQNTETVSYFTPLPDHIFGATYRKAGGGAAGIK
EEECCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCHHHHCCHHHCCCCCHHHHH
AVRALWDLNTDPSKIVSAGPFKVGSYKRGERLNLVKNPYYGQWNKDSQGRPLPYLDGLQY
HHHHHHCCCCCHHHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE
NIVPDQNAALAQFLAGNTDLFSPSNRDQLAQVVAAKNSGKLKVDVLANAGPNASVDFLYF
EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
NWNKASDPFKQQLFRNTKFRQAMSMLVNKDAMIDQVMGGLAVPAWTSVYPLYSEWVAPNV
ECCCCCCHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
DKYKYNPAAANKLLDELGFKKRGADGIRVDSKGNRLSFTLLTNSENNRRQQLARLFADEA
CCEECCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
KKAGVEVKTNFIPFNQLLDIAYPESDAAKLDRKFDAAITGLGGGGFINPVGVASLLTCGG
HHCCCEEEEEEECHHHHHEECCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCC
DLNGYNQSKKCIQPWETQQANLFFKSTAEFDQAKRKAIANQIQQLQANNLGYIYLLSPNA
CCCCCCCCCHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
HYAWDQRVQGEYPKKIATPLWASSYFGPRNIDQTWIKK
CCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure 
AKNRLTSLDPVPIVTALESHIVRMSRPQCVSERVICSRLRRHMKKFAFLAAALTLATAG
CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AKPYVAPANQTVAAPSNNDMGGVLRLVQLKDFDTYNPLVAQGRPNIPELVSGAALITPDP
CCCEECCCCCEEECCCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCHHHHCCCEEECCCC
YTYEYVPAAAESYTISPDKRTYTFTLRPELKWSDGQAITADDYISTFEIYSKDEDANLNA
CCEEEECCCCCCEEECCCCEEEEEEECCCEEECCCCEEECCCCCEEEEEECCCCCCCEEE
YLFDNGKPVTWKKLGDLKFSVTFPRATVQNTETVSYFTPLPDHIFGATYRKAGGGAAGIK
EEECCCCEEEEEECCCEEEEEECCCCCCCCCCEEEEECCCCHHHHCCHHHCCCCCHHHHH
AVRALWDLNTDPSKIVSAGPFKVGSYKRGERLNLVKNPYYGQWNKDSQGRPLPYLDGLQY
HHHHHHCCCCCHHHHEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEE
NIVPDQNAALAQFLAGNTDLFSPSNRDQLAQVVAAKNSGKLKVDVLANAGPNASVDFLYF
EECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEEE
NWNKASDPFKQQLFRNTKFRQAMSMLVNKDAMIDQVMGGLAVPAWTSVYPLYSEWVAPNV
ECCCCCCHHHHHHHHCHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCC
DKYKYNPAAANKLLDELGFKKRGADGIRVDSKGNRLSFTLLTNSENNRRQQLARLFADEA
CCEECCHHHHHHHHHHHCCCCCCCCCEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHH
KKAGVEVKTNFIPFNQLLDIAYPESDAAKLDRKFDAAITGLGGGGFINPVGVASLLTCGG
HHCCCEEEEEEECHHHHHEECCCCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCC
DLNGYNQSKKCIQPWETQQANLFFKSTAEFDQAKRKAIANQIQQLQANNLGYIYLLSPNA
CCCCCCCCCHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
HYAWDQRVQGEYPKKIATPLWASSYFGPRNIDQTWIKK
CCCCCCCCCCCCCHHHHCCHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]