| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is ydjJ [H]
Identifier: 94985410
GI number: 94985410
Start: 1391893
End: 1392888
Strand: Reverse
Name: ydjJ [H]
Synonym: Dgeo_1309
Alternate gene names: 94985410
Gene position: 1392888-1391893 (Counterclockwise)
Preceding gene: 94985411
Following gene: 94985408
Centisome position: 56.46
GC content: 68.27
Gene sequence:
>996_bases ATGCCCGCCATGTTGCGTTCCCTGCTGTGGCTGCCCGGAGCAGTCCTGGTTCTTGGCGTGCTGCTCGACCTGCTGGCCAG CAGCATGCAAACGGGTGAGGGCCGCCTCTTACGGTTGATTCACCGCCTGCTGTACACCCTGATTCAAGCAGTGGCCCAGG TGGGGGGGCGCCGTTACCTGGCCTGGTCTGGGGCAGTGCTGGTGGTCGGCACCCTGTGGACTTGGGTGTCCCTGTCCTGG CTGGGCTGGAGCCTGGTGTTCTGGTCCAAGCCGCAAGCTTTGGTCGGCGCCTCGACCGGCACGCCCGCCGATCTGTGGGA CGTGCTGTATTTCGTGGGCTACACCATGACCACGCTGGGGCTGGGCGACCTGAAACCGATCTACACGGGTTGGCGGCTCC TGTCGGATCTCACCGCGCTCGATGGGTTTGTCCTGATCACTTTCGCCATCTCCTTCGTTGTGCCGGTGGCCCAGGCCCAG GCGGGGCGGCGCATTCTCTCGCTGCGGATTCACCGCTTGGGGGCCACCGCTCAGGGCCTGCTGATCACCGCCTGGCACGA CCACCCACGCGGCCTGCAAGGGCTGGTGGACGATCTGGCGGTGAGCCTCAACGCCCTGGACGCCCAGCTCAAGACCACCC CCAGCCTGTACCGTTTCCACGACGCCCGGCCCGAGGAATCCATCGAGCTGGCCCTGCCCGCTTTCGACGAGGCCCTCAGC CTCATTGAGTTCGCCCTCGACGCGCCGCCGCCCAAAGGTCTGCGGGCAGTGCGCGCTTCCGTCTCGAGCCTGCTGGGCAC CTACCGTGACGTGCATCCCGGGCTGCCCCGCCCCGCGCCGCCCCTGCCCGACCTCACGCCCCTGCGCGCTGCCGGACTGC CCGTGCGTGAAGGGGCAGTGGTCGAGGCCGCCTTCGCGGAATTGACCGAGCGCCGCCGCGTCCTGCACAACATGACGGCG CGGGGCGGGTTTTCCTGGGCGGACGTGGAGGCTTGA
Upstream 100 bases:
>100_bases AGATCTGGGCGAGGTCTGGTTCGCGTCCTTCGGCCAGGAAGGCTAGCCGTCGGGAGAGCCAGGAGGACGGACATACCGGC TCTCCCAGCGCTCTGGCAGA
Downstream 100 bases:
>100_bases GGCCGGCGCCGCAGCTCAGGCACTGGCCCGTCCGCGGCTACCGTTTTTGCCCGCGCGCAGCACGTCAACAACCCCCGGCA CACGCAAAATTGCCTCCCGC
Product: Ion transport 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPAMLRSLLWLPGAVLVLGVLLDLLASSMQTGEGRLLRLIHRLLYTLIQAVAQVGGRRYLAWSGAVLVVGTLWTWVSLSW LGWSLVFWSKPQALVGASTGTPADLWDVLYFVGYTMTTLGLGDLKPIYTGWRLLSDLTALDGFVLITFAISFVVPVAQAQ AGRRILSLRIHRLGATAQGLLITAWHDHPRGLQGLVDDLAVSLNALDAQLKTTPSLYRFHDARPEESIELALPAFDEALS LIEFALDAPPPKGLRAVRASVSSLLGTYRDVHPGLPRPAPPLPDLTPLRAAGLPVREGAVVEAAFAELTERRRVLHNMTA RGGFSWADVEA
Sequences:
>Translated_331_residues MPAMLRSLLWLPGAVLVLGVLLDLLASSMQTGEGRLLRLIHRLLYTLIQAVAQVGGRRYLAWSGAVLVVGTLWTWVSLSW LGWSLVFWSKPQALVGASTGTPADLWDVLYFVGYTMTTLGLGDLKPIYTGWRLLSDLTALDGFVLITFAISFVVPVAQAQ AGRRILSLRIHRLGATAQGLLITAWHDHPRGLQGLVDDLAVSLNALDAQLKTTPSLYRFHDARPEESIELALPAFDEALS LIEFALDAPPPKGLRAVRASVSSLLGTYRDVHPGLPRPAPPLPDLTPLRAAGLPVREGAVVEAAFAELTERRRVLHNMTA RGGFSWADVEA >Mature_330_residues PAMLRSLLWLPGAVLVLGVLLDLLASSMQTGEGRLLRLIHRLLYTLIQAVAQVGGRRYLAWSGAVLVVGTLWTWVSLSWL GWSLVFWSKPQALVGASTGTPADLWDVLYFVGYTMTTLGLGDLKPIYTGWRLLSDLTALDGFVLITFAISFVVPVAQAQA GRRILSLRIHRLGATAQGLLITAWHDHPRGLQGLVDDLAVSLNALDAQLKTTPSLYRFHDARPEESIELALPAFDEALSL IEFALDAPPPKGLRAVRASVSSLLGTYRDVHPGLPRPAPPLPDLTPLRAAGLPVREGAVVEAAFAELTERRRVLHNMTAR GGFSWADVEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013099 [H]
Pfam domain/function: PF07885 Ion_trans_2 [H]
EC number: NA
Molecular weight: Translated: 35971; Mature: 35840
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAMLRSLLWLPGAVLVLGVLLDLLASSMQTGEGRLLRLIHRLLYTLIQAVAQVGGRRYL CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE AWSGAVLVVGTLWTWVSLSWLGWSLVFWSKPQALVGASTGTPADLWDVLYFVGYTMTTLG EECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC LGDLKPIYTGWRLLSDLTALDGFVLITFAISFVVPVAQAQAGRRILSLRIHRLGATAQGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LITAWHDHPRGLQGLVDDLAVSLNALDAQLKTTPSLYRFHDARPEESIELALPAFDEALS EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCHHHHHHH LIEFALDAPPPKGLRAVRASVSSLLGTYRDVHPGLPRPAPPLPDLTPLRAAGLPVREGAV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHH VEAAFAELTERRRVLHNMTARGGFSWADVEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PAMLRSLLWLPGAVLVLGVLLDLLASSMQTGEGRLLRLIHRLLYTLIQAVAQVGGRRYL HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE AWSGAVLVVGTLWTWVSLSWLGWSLVFWSKPQALVGASTGTPADLWDVLYFVGYTMTTLG EECCHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHCC LGDLKPIYTGWRLLSDLTALDGFVLITFAISFVVPVAQAQAGRRILSLRIHRLGATAQGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE LITAWHDHPRGLQGLVDDLAVSLNALDAQLKTTPSLYRFHDARPEESIELALPAFDEALS EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEEECCHHHHHHH LIEFALDAPPPKGLRAVRASVSSLLGTYRDVHPGLPRPAPPLPDLTPLRAAGLPVREGAV HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCHH VEAAFAELTERRRVLHNMTARGGFSWADVEA HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9455482; 9384377 [H]