| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is gph [C]
Identifier: 94985389
GI number: 94985389
Start: 1368112
End: 1368750
Strand: Reverse
Name: gph [C]
Synonym: Dgeo_1288
Alternate gene names: 94985389
Gene position: 1368750-1368112 (Counterclockwise)
Preceding gene: 94985390
Following gene: 94985388
Centisome position: 55.48
GC content: 63.69
Gene sequence:
>639_bases ATGACTGATCCCATCCTGGCCGCTTCCCGTCACGTCGCCTTTGACTGGGGCGGCGTCTTCACCGTGGGCACCTTCGACGG CCGCTCCACGCAAAACCTAGCCGAGCGCAGCGGCGTACCGGTCGAGCGCGTGCGTGAGAGCTATTTCCGGCATGTGCAAC AACTGGAGGTGGGAGCTTGGACCCTCCCGCAGTTTTGGGCGGTGGTGGGGCAGGAGACAGGAATCACGCTGCCCTACGCC GAGTTCGAGGCACTCTATCTCGGCAGCATCCACGACAACCTGCCGATGTACGCGACCCTAGCCGCTTTGCCCCGTGAAGT CCGGGTGGGCCTGCTCAGCAACAATTACCCGGTTGTTTGCGACCACCTGCGGGCCGATCCCCGGTTTGCTCGCTTCGATG CCTTGGTCTTTAGCAATGAGATCGGACAGAAAAAGCCGCACCCCGACGCCTTCGCTGCACTGGCCGACGCGATGGGAGTG CCCGCTGCACAGGTCGCCTTTGTGGACGACGTCCAGGAGAACATCGACGCGGCGCGGGCGGCCGGATTTCACGGCCTGCT CTACCACCACGATCACCACGCCGCCTTTGAACGCGAATTGGGCGTGTGGCTGGGCTTGCCGGTGAGTGCCTTGAGCTGA
Upstream 100 bases:
>100_bases TGCTGTTGGCAGACGGCGGGGCAGGCTAGGTCGCTGCGTCTGAACTCTGCGTCTGAACAGCGGTCCTGTTCCGCCCAGTT CGGTGAGGCACAATCGCCGC
Downstream 100 bases:
>100_bases CAGCTTCCCTGTTTCCCTCGCGCGCCCCCGTTCCCCCGGCGGGCGCTTTGTGTTGATCGAGGTGTTGATCGAGTGGTGTA CCTGCCAAAGCGGTGTACCC
Product: HAD family hydrolase
Products: Glycolate; Phosphate [C]
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; CbbY/CbbZ/GpH/YieH Family Hydrolase
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAWTLPQFWAVVGQETGITLPYA EFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVCDHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGV PAAQVAFVDDVQENIDAARAAGFHGLLYHHDHHAAFERELGVWLGLPVSALS
Sequences:
>Translated_212_residues MTDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAWTLPQFWAVVGQETGITLPYA EFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVCDHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGV PAAQVAFVDDVQENIDAARAAGFHGLLYHHDHHAAFERELGVWLGLPVSALS >Mature_211_residues TDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAWTLPQFWAVVGQETGITLPYAE FEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVCDHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGVP AAQVAFVDDVQENIDAARAAGFHGLLYHHDHHAAFERELGVWLGLPVSALS
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18 [C]
Molecular weight: Translated: 23322; Mature: 23190
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAW CCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC TLPQFWAVVGQETGITLPYAEFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVC CHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCCHHHHHHHCCHHHEEEEECCCCCEEE DHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGVPAAQVAFVDDVQENIDAARA CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGFHGLLYHHDHHAAFERELGVWLGLPVSALS CCCCCEEEECCCHHHHHHHCCEEECCCHHHCC >Mature Secondary Structure TDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAW CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC TLPQFWAVVGQETGITLPYAEFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVC CHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCCHHHHHHHCCHHHEEEEECCCCCEEE DHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGVPAAQVAFVDDVQENIDAARA CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AGFHGLLYHHDHHAAFERELGVWLGLPVSALS CCCCCEEEECCCHHHHHHHCCEEECCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.57 {phosphoglycolate}} [C]
Substrates: D-Glycerate 2-phosphatelyc; H2O [C]
Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]
General reaction: Additional information:
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA