Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is gph [C]

Identifier: 94985389

GI number: 94985389

Start: 1368112

End: 1368750

Strand: Reverse

Name: gph [C]

Synonym: Dgeo_1288

Alternate gene names: 94985389

Gene position: 1368750-1368112 (Counterclockwise)

Preceding gene: 94985390

Following gene: 94985388

Centisome position: 55.48

GC content: 63.69

Gene sequence:

>639_bases
ATGACTGATCCCATCCTGGCCGCTTCCCGTCACGTCGCCTTTGACTGGGGCGGCGTCTTCACCGTGGGCACCTTCGACGG
CCGCTCCACGCAAAACCTAGCCGAGCGCAGCGGCGTACCGGTCGAGCGCGTGCGTGAGAGCTATTTCCGGCATGTGCAAC
AACTGGAGGTGGGAGCTTGGACCCTCCCGCAGTTTTGGGCGGTGGTGGGGCAGGAGACAGGAATCACGCTGCCCTACGCC
GAGTTCGAGGCACTCTATCTCGGCAGCATCCACGACAACCTGCCGATGTACGCGACCCTAGCCGCTTTGCCCCGTGAAGT
CCGGGTGGGCCTGCTCAGCAACAATTACCCGGTTGTTTGCGACCACCTGCGGGCCGATCCCCGGTTTGCTCGCTTCGATG
CCTTGGTCTTTAGCAATGAGATCGGACAGAAAAAGCCGCACCCCGACGCCTTCGCTGCACTGGCCGACGCGATGGGAGTG
CCCGCTGCACAGGTCGCCTTTGTGGACGACGTCCAGGAGAACATCGACGCGGCGCGGGCGGCCGGATTTCACGGCCTGCT
CTACCACCACGATCACCACGCCGCCTTTGAACGCGAATTGGGCGTGTGGCTGGGCTTGCCGGTGAGTGCCTTGAGCTGA

Upstream 100 bases:

>100_bases
TGCTGTTGGCAGACGGCGGGGCAGGCTAGGTCGCTGCGTCTGAACTCTGCGTCTGAACAGCGGTCCTGTTCCGCCCAGTT
CGGTGAGGCACAATCGCCGC

Downstream 100 bases:

>100_bases
CAGCTTCCCTGTTTCCCTCGCGCGCCCCCGTTCCCCCGGCGGGCGCTTTGTGTTGATCGAGGTGTTGATCGAGTGGTGTA
CCTGCCAAAGCGGTGTACCC

Product: HAD family hydrolase

Products: Glycolate; Phosphate [C]

Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; CbbY/CbbZ/GpH/YieH Family Hydrolase

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAWTLPQFWAVVGQETGITLPYA
EFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVCDHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGV
PAAQVAFVDDVQENIDAARAAGFHGLLYHHDHHAAFERELGVWLGLPVSALS

Sequences:

>Translated_212_residues
MTDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAWTLPQFWAVVGQETGITLPYA
EFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVCDHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGV
PAAQVAFVDDVQENIDAARAAGFHGLLYHHDHHAAFERELGVWLGLPVSALS
>Mature_211_residues
TDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAWTLPQFWAVVGQETGITLPYAE
FEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVCDHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGVP
AAQVAFVDDVQENIDAARAAGFHGLLYHHDHHAAFERELGVWLGLPVSALS

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.18 [C]

Molecular weight: Translated: 23322; Mature: 23190

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAW
CCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
TLPQFWAVVGQETGITLPYAEFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVC
CHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCCHHHHHHHCCHHHEEEEECCCCCEEE
DHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGVPAAQVAFVDDVQENIDAARA
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AGFHGLLYHHDHHAAFERELGVWLGLPVSALS
CCCCCEEEECCCHHHHHHHCCEEECCCHHHCC
>Mature Secondary Structure 
TDPILAASRHVAFDWGGVFTVGTFDGRSTQNLAERSGVPVERVRESYFRHVQQLEVGAW
CCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCC
TLPQFWAVVGQETGITLPYAEFEALYLGSIHDNLPMYATLAALPREVRVGLLSNNYPVVC
CHHHHHHHHCCCCCCCCCHHHHHEEEECCCCCCCCHHHHHHHCCHHHEEEEECCCCCEEE
DHLRADPRFARFDALVFSNEIGQKKPHPDAFAALADAMGVPAAQVAFVDDVQENIDAARA
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AGFHGLLYHHDHHAAFERELGVWLGLPVSALS
CCCCCEEEECCCHHHHHHHCCEEECCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Mg2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): 0.57 {phosphoglycolate}} [C]

Substrates: D-Glycerate 2-phosphatelyc; H2O [C]

Specific reaction: D-Glycerate 2-phosphatelyc + H2O --> Glycolate + Phosphate [C]

General reaction: Additional information:

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA