| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985322
Identifier: 94985322
GI number: 94985322
Start: 1300401
End: 1300907
Strand: Reverse
Name: 94985322
Synonym: Dgeo_1220
Alternate gene names: NA
Gene position: 1300907-1300401 (Counterclockwise)
Preceding gene: 94985326
Following gene: 94985319
Centisome position: 52.73
GC content: 68.05
Gene sequence:
>507_bases GTGAACACCCGGCCAACCCGCCCCCTGCCGACGCGCCCCGCCGGATACGTGGAGTTGGCACGTTACAGCCGCCTGGATCG GTTCTGGGCCTACCTCGCCGGGGCTGAGCGTGCCGGGCGGGAAGTGCAGGTGCTCCGCGGTGACCCACCCGAACTGTGCC GCCGCCGCATCACCGGCTACGTCCTTCCCAGTATGGCCCTGCTTCTTGACACCGGACGCGTGTTGCAGGCCCTCGATGAG GGCTTCGAGACTCATCCGGCACTGCTCGCGCTGCTGGCGGGTGACCCCGAGCCGCTGCGCGCCGAAGTGAATGCCCACTT TGAGTTGCGCCTCGATTTCGTGCTGGCCTTCACTGCCGCCCGCGACCTGATCGCCAAACCCGAATTCAAGTACGTCCCCC TGGTGCGCGGCCTGAGTGCGTTGCCCCTCAGCCTGTCCCTTCCGCCCCGCCGTTTGGGCCGCGACGAGGTGCACTGGCTG GTCCAGCGGGCGTGTGGTTTGGTCTAA
Upstream 100 bases:
>100_bases GTCATGCTTCCGTTGTACTCGGTCCAAGTGTGTGTGGCGGGCAGCTCCAAGCTCCCGCGGTTCACGAAATATTCAGCGTT GAGCCCGCTAGCATGACCTC
Downstream 100 bases:
>100_bases CGGCGCTCCCTACCCGTCGCTCTCCGTCCGCCTCTTCGGCTTGCTTGCCGCGAACTTCGCCAGCCGCGCGGTCATGGCGG GCGGCGTATTGGTCAGCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MNTRPTRPLPTRPAGYVELARYSRLDRFWAYLAGAERAGREVQVLRGDPPELCRRRITGYVLPSMALLLDTGRVLQALDE GFETHPALLALLAGDPEPLRAEVNAHFELRLDFVLAFTAARDLIAKPEFKYVPLVRGLSALPLSLSLPPRRLGRDEVHWL VQRACGLV
Sequences:
>Translated_168_residues MNTRPTRPLPTRPAGYVELARYSRLDRFWAYLAGAERAGREVQVLRGDPPELCRRRITGYVLPSMALLLDTGRVLQALDE GFETHPALLALLAGDPEPLRAEVNAHFELRLDFVLAFTAARDLIAKPEFKYVPLVRGLSALPLSLSLPPRRLGRDEVHWL VQRACGLV >Mature_168_residues MNTRPTRPLPTRPAGYVELARYSRLDRFWAYLAGAERAGREVQVLRGDPPELCRRRITGYVLPSMALLLDTGRVLQALDE GFETHPALLALLAGDPEPLRAEVNAHFELRLDFVLAFTAARDLIAKPEFKYVPLVRGLSALPLSLSLPPRRLGRDEVHWL VQRACGLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18848; Mature: 18848
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTRPTRPLPTRPAGYVELARYSRLDRFWAYLAGAERAGREVQVLRGDPPELCRRRITGY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH VLPSMALLLDTGRVLQALDEGFETHPALLALLAGDPEPLRAEVNAHFELRLDFVLAFTAA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCEEEEEHHHHHHHHHH RDLIAKPEFKYVPLVRGLSALPLSLSLPPRRLGRDEVHWLVQRACGLV HHHHCCCCCCCHHHHCCCCCCCEECCCCHHHCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNTRPTRPLPTRPAGYVELARYSRLDRFWAYLAGAERAGREVQVLRGDPPELCRRRITGY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHH VLPSMALLLDTGRVLQALDEGFETHPALLALLAGDPEPLRAEVNAHFELRLDFVLAFTAA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCCEEEEEHHHHHHHHHH RDLIAKPEFKYVPLVRGLSALPLSLSLPPRRLGRDEVHWLVQRACGLV HHHHCCCCCCCHHHHCCCCCCCEECCCCHHHCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA