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The map label for this gene is yteT [H]

Identifier: 94985213

GI number: 94985213

Start: 1179765

End: 1180967

Strand: Reverse

Name: yteT [H]

Synonym: Dgeo_1110

Alternate gene names: 94985213

Gene position: 1180967-1179765 (Counterclockwise)

Preceding gene: 94985214

Following gene: 94985204

Centisome position: 47.87

GC content: 70.49

Gene sequence:

>1203_bases
ATGATCACCGTCGCGATCCTGGGCTGCGGCAACCGGGGCGGGGACGTGTACGCGCGTCATCTGGCGGCCCAAGGGGCCCG
CGTTACCCAGCTCGTGGACCCGCGGCCCGCCCGCTTGAGCGAGGTGGCCGCGCGGCACGGTGTTCCCCCGGAGGCGTGCT
TCCATGACCTCGACACCTTCTTCGCGCTGGGACGGGTGGCCGACGCGGTGGTGATCGCCACACCGGACGACACGCACGTG
GCACCGTGCATGCGGGCGCTGGAACTCGGGTACGACGTGCTGCTGGAAAAGCCGGTGTGTCTGGCAGAAGACGAGCTGGA
CGTGCTGCTGGCAGCGGAGGCGGCCTCGCGGGGGCGCGTGACGGTCTGCCACGTGCTGCGCGCGACAGCCTTTTTCCAGA
CGGTGCGGGCGGTGCTGGACTCGGGACGACTGGGGCGGCTGGTTGGCCTCCAGCACGCGGAGAACGTGGCGTACTGGCAT
TACGCGCATTCGTATGTGCGGGGGAACTGGGCGCAGTCACCGCCCGCCGCGCCGTTTGTGCTCGCCAAGAGCGGCCATGA
CCTCGACCTGCTGCGCTGGTTTGCCGCCGCGCCACCCCTGCGGGTAAGCAGCGCCGGCGGACTGCACCACTTCCGCCCGG
AGGAGGCACCCCCCGGGGCCACCGACCGCTGCGTGACCTGTCCGGTCGTGGCGTGTCCCTACGACGCGCGGCGCATCTAC
GGCAGCCGCGCTCCGGACCAGTGGCCAGTGACGGTGCTGACGGCGGGTGGCCTCTCGCTGGCGGAGGCGCTGGCATCTGG
CCCATACGGACGCTGCGTGTACCGCGCGGGGAACAATGTGCCGGACCACCAGGCGGTCACCGTCACTTTTGAGGGCGGCG
TGACCGCCCAGCTCACCGTCAGTGCCTTTACCCACAACAACACCCGAACGCTGAAGCTGCTGGGCACGCACGGCGAGCTG
CGCGGCCAAATGGAGCGCGGCGAGATCGAGATTCACGACTTCCGCACCGGTCAGGTCGAAGGCCTGCGCGTGGACGTGGG
TGGCAACCACGGTGGCGGGGACGAGGCGCTGGTCGCGGCCTGGCTCGCCTTTCTGCGTGGCGAGGCGGACGTGCCGACCC
CGCTTGCTGAGTCGCTCGACTCGCACCGGATGGCGTTTGCCGCCGAGCGGGCACGCCTGCGGGGAACGGTGGAGGTGCTT
TAG

Upstream 100 bases:

>100_bases
CAAACGCCACCCATATGCGGGTGACGGTGGAGACCCTGGGCGAAGGCGAGTACGGCCGCCAGCTCGCCCAGAGCCTGACC
GGCTTTGGGCGGTGGCCCGC

Downstream 100 bases:

>100_bases
GCGCCGCTGCTGTTCAGAAAGTCGAGGGTGTGGCGGGCCACCGTGCGCGGAAAGCTGGCGGTGAGGGCATGGGTGCCGTG
CGGAATCCGGCAGACGCGGG

Product: oxidoreductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MITVAILGCGNRGGDVYARHLAAQGARVTQLVDPRPARLSEVAARHGVPPEACFHDLDTFFALGRVADAVVIATPDDTHV
APCMRALELGYDVLLEKPVCLAEDELDVLLAAEAASRGRVTVCHVLRATAFFQTVRAVLDSGRLGRLVGLQHAENVAYWH
YAHSYVRGNWAQSPPAAPFVLAKSGHDLDLLRWFAAAPPLRVSSAGGLHHFRPEEAPPGATDRCVTCPVVACPYDARRIY
GSRAPDQWPVTVLTAGGLSLAEALASGPYGRCVYRAGNNVPDHQAVTVTFEGGVTAQLTVSAFTHNNTRTLKLLGTHGEL
RGQMERGEIEIHDFRTGQVEGLRVDVGGNHGGGDEALVAAWLAFLRGEADVPTPLAESLDSHRMAFAAERARLRGTVEVL

Sequences:

>Translated_400_residues
MITVAILGCGNRGGDVYARHLAAQGARVTQLVDPRPARLSEVAARHGVPPEACFHDLDTFFALGRVADAVVIATPDDTHV
APCMRALELGYDVLLEKPVCLAEDELDVLLAAEAASRGRVTVCHVLRATAFFQTVRAVLDSGRLGRLVGLQHAENVAYWH
YAHSYVRGNWAQSPPAAPFVLAKSGHDLDLLRWFAAAPPLRVSSAGGLHHFRPEEAPPGATDRCVTCPVVACPYDARRIY
GSRAPDQWPVTVLTAGGLSLAEALASGPYGRCVYRAGNNVPDHQAVTVTFEGGVTAQLTVSAFTHNNTRTLKLLGTHGEL
RGQMERGEIEIHDFRTGQVEGLRVDVGGNHGGGDEALVAAWLAFLRGEADVPTPLAESLDSHRMAFAAERARLRGTVEVL
>Mature_400_residues
MITVAILGCGNRGGDVYARHLAAQGARVTQLVDPRPARLSEVAARHGVPPEACFHDLDTFFALGRVADAVVIATPDDTHV
APCMRALELGYDVLLEKPVCLAEDELDVLLAAEAASRGRVTVCHVLRATAFFQTVRAVLDSGRLGRLVGLQHAENVAYWH
YAHSYVRGNWAQSPPAAPFVLAKSGHDLDLLRWFAAAPPLRVSSAGGLHHFRPEEAPPGATDRCVTCPVVACPYDARRIY
GSRAPDQWPVTVLTAGGLSLAEALASGPYGRCVYRAGNNVPDHQAVTVTFEGGVTAQLTVSAFTHNNTRTLKLLGTHGEL
RGQMERGEIEIHDFRTGQVEGLRVDVGGNHGGGDEALVAAWLAFLRGEADVPTPLAESLDSHRMAFAAERARLRGTVEVL

Specific function: May play a role in the degradation of type I rhamnogalacturonan derived from plant cell walls [H]

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42871; Mature: 42871

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVAILGCGNRGGDVYARHLAAQGARVTQLVDPRPARLSEVAARHGVPPEACFHDLDTF
CEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
FALGRVADAVVIATPDDTHVAPCMRALELGYDVLLEKPVCLAEDELDVLLAAEAASRGRV
HHHHHHHCEEEEECCCCCHHHHHHHHHHCCHHHHHCCCCEECCCCCEEEEEECCCCCCCC
TVCHVLRATAFFQTVRAVLDSGRLGRLVGLQHAENVAYWHYAHSYVRGNWAQSPPAAPFV
HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHCCEEEEEHHHHHHCCCCCCCCCCCCEE
LAKSGHDLDLLRWFAAAPPLRVSSAGGLHHFRPEEAPPGATDRCVTCPVVACPYDARRIY
EECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCEEECCCHHHHHC
GSRAPDQWPVTVLTAGGLSLAEALASGPYGRCVYRAGNNVPDHQAVTVTFEGGVTAQLTV
CCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEE
SAFTHNNTRTLKLLGTHGELRGQMERGEIEIHDFRTGQVEGLRVDVGGNHGGGDEALVAA
EEEECCCCEEEEEEECCCHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHH
WLAFLRGEADVPTPLAESLDSHRMAFAAERARLRGTVEVL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEC
>Mature Secondary Structure
MITVAILGCGNRGGDVYARHLAAQGARVTQLVDPRPARLSEVAARHGVPPEACFHDLDTF
CEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHH
FALGRVADAVVIATPDDTHVAPCMRALELGYDVLLEKPVCLAEDELDVLLAAEAASRGRV
HHHHHHHCEEEEECCCCCHHHHHHHHHHCCHHHHHCCCCEECCCCCEEEEEECCCCCCCC
TVCHVLRATAFFQTVRAVLDSGRLGRLVGLQHAENVAYWHYAHSYVRGNWAQSPPAAPFV
HHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHCCEEEEEHHHHHHCCCCCCCCCCCCEE
LAKSGHDLDLLRWFAAAPPLRVSSAGGLHHFRPEEAPPGATDRCVTCPVVACPYDARRIY
EECCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCEEECCCHHHHHC
GSRAPDQWPVTVLTAGGLSLAEALASGPYGRCVYRAGNNVPDHQAVTVTFEGGVTAQLTV
CCCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEE
SAFTHNNTRTLKLLGTHGELRGQMERGEIEIHDFRTGQVEGLRVDVGGNHGGGDEALVAA
EEEECCCCEEEEEEECCCHHCCCCCCCEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHH
WLAFLRGEADVPTPLAESLDSHRMAFAAERARLRGTVEVL
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]