Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is cdsA [H]

Identifier: 94985149

GI number: 94985149

Start: 1117384

End: 1118214

Strand: Reverse

Name: cdsA [H]

Synonym: Dgeo_1045

Alternate gene names: 94985149

Gene position: 1118214-1117384 (Counterclockwise)

Preceding gene: 94985150

Following gene: 94985148

Centisome position: 45.32

GC content: 63.9

Gene sequence:

>831_bases
GTGGAATCGCTGAGCACCCGCGTCCTCACCTCAGTGGTGGGCTTTGCCATCATCAGCGTGGTCGTGTGGATCGGGTGGAT
TGCCATGGTTCCCCTGCTGGTGTTCGTGTCTGTGATGGGCCTCTCGGAGTACATCCGGATGCTTGACCGCAACGATATCG
ACGTGCGGCGCATCTCGCTGGGGATCTTCGGGACGGCGCTGATTCTGGCGAGCCTGCCCATGCTCCCGGAGGCACCCTGG
CTGGGCGGGTCGTGGCGCGAGGTGGTGCTGACGATTGCTCTTGGGTACCTGCTGGTGATGGAGGTCATGCGGCCCGGCGA
GCGCCCGCTCGAGCGCATCGTGTACTCGCTCTTCGGGCTGCTGTACATTCCCTGGCTGCTGGGGTACTTCCTGCTGCTGC
GCTACACACCGGACGCGACCCAGGGCCTGCTGTACTTCGCGCTGCCGCTGCTGGCGACCTTTGCGGCGGATATCGGCGGG
TACTTCGGCGGCCATTTCTTCGGCAGGCGCAAGCTCGCGCCGGAGATCAGCCCCGGCAAGACCGTTGAGGGAGCCGTCAG
CGGCTTCGCCTTCAGCTTCATGACGGTGCTGGTCTTTTCACAGCTGACTCACCTTGGCTCCCCGCTCGAAGCCCTGCTGT
ACTCCATCCTGGTGGCGAGCGCCTCTCAGCTGGGCGATCTGGCCGAGAGTCTGCTGAAGCGCGCCCTAAAGACCAAGGAC
AGCGGCAACAGCCTGCCCGGGCACGGCGGCTTTCTCGATCGCCTGGACTCGCTGCTGTTTGCCGTTCCGGCGACGTATCT
GTTTTTGAATATCAGCGTGTTTACGCGGTGA

Upstream 100 bases:

>100_bases
CCAGACAACGTGACCGCCGGGACCTCCGGCGGCGCGTTCTTATAGGCCGCGGGGGGTGGGACAACACCTTGGCGTCGCGA
TCTTCCGCCAGGAGCCAGCG

Downstream 100 bases:

>100_bases
GCGCGAGGAGCTGCTCTGAGCTTTTTTCACCCCTTCCCACCATCCGTCCGGCGCGTATGCGCCATCCTGTCTCCAATGAA
GCTGACGGTTCTGGGCAGTA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MESLSTRVLTSVVGFAIISVVVWIGWIAMVPLLVFVSVMGLSEYIRMLDRNDIDVRRISLGIFGTALILASLPMLPEAPW
LGGSWREVVLTIALGYLLVMEVMRPGERPLERIVYSLFGLLYIPWLLGYFLLLRYTPDATQGLLYFALPLLATFAADIGG
YFGGHFFGRRKLAPEISPGKTVEGAVSGFAFSFMTVLVFSQLTHLGSPLEALLYSILVASASQLGDLAESLLKRALKTKD
SGNSLPGHGGFLDRLDSLLFAVPATYLFLNISVFTR

Sequences:

>Translated_276_residues
MESLSTRVLTSVVGFAIISVVVWIGWIAMVPLLVFVSVMGLSEYIRMLDRNDIDVRRISLGIFGTALILASLPMLPEAPW
LGGSWREVVLTIALGYLLVMEVMRPGERPLERIVYSLFGLLYIPWLLGYFLLLRYTPDATQGLLYFALPLLATFAADIGG
YFGGHFFGRRKLAPEISPGKTVEGAVSGFAFSFMTVLVFSQLTHLGSPLEALLYSILVASASQLGDLAESLLKRALKTKD
SGNSLPGHGGFLDRLDSLLFAVPATYLFLNISVFTR
>Mature_276_residues
MESLSTRVLTSVVGFAIISVVVWIGWIAMVPLLVFVSVMGLSEYIRMLDRNDIDVRRISLGIFGTALILASLPMLPEAPW
LGGSWREVVLTIALGYLLVMEVMRPGERPLERIVYSLFGLLYIPWLLGYFLLLRYTPDATQGLLYFALPLLATFAADIGG
YFGGHFFGRRKLAPEISPGKTVEGAVSGFAFSFMTVLVFSQLTHLGSPLEALLYSILVASASQLGDLAESLLKRALKTKD
SGNSLPGHGGFLDRLDSLLFAVPATYLFLNISVFTR

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=187, Percent_Identity=37.9679144385027, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1787677, Length=161, Percent_Identity=36.0248447204969, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 30259; Mature: 30259

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLSTRVLTSVVGFAIISVVVWIGWIAMVPLLVFVSVMGLSEYIRMLDRNDIDVRRISL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GIFGTALILASLPMLPEAPWLGGSWREVVLTIALGYLLVMEVMRPGERPLERIVYSLFGL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LYIPWLLGYFLLLRYTPDATQGLLYFALPLLATFAADIGGYFGGHFFGRRKLAPEISPGK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TVEGAVSGFAFSFMTVLVFSQLTHLGSPLEALLYSILVASASQLGDLAESLLKRALKTKD
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGNSLPGHGGFLDRLDSLLFAVPATYLFLNISVFTR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MESLSTRVLTSVVGFAIISVVVWIGWIAMVPLLVFVSVMGLSEYIRMLDRNDIDVRRISL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GIFGTALILASLPMLPEAPWLGGSWREVVLTIALGYLLVMEVMRPGERPLERIVYSLFGL
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LYIPWLLGYFLLLRYTPDATQGLLYFALPLLATFAADIGGYFGGHFFGRRKLAPEISPGK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TVEGAVSGFAFSFMTVLVFSQLTHLGSPLEALLYSILVASASQLGDLAESLLKRALKTKD
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SGNSLPGHGGFLDRLDSLLFAVPATYLFLNISVFTR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]