Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94985142

Identifier: 94985142

GI number: 94985142

Start: 1110198

End: 1111064

Strand: Reverse

Name: 94985142

Synonym: Dgeo_1038

Alternate gene names: NA

Gene position: 1111064-1110198 (Counterclockwise)

Preceding gene: 94985143

Following gene: 94985132

Centisome position: 45.03

GC content: 70.36

Gene sequence:

>867_bases
ATGCGCCGCTTTCTCGTCCTTCTGCTCTGCACGCTGCTTGCCGCCCTATCGGGATCGGCGCCGGCGGCGAGCGCCCCGCC
ATCCGGCTGGGTTCTGCCACTGCCTCAAGTGCCGGATACTGTAAAGCTGGACGGCCACCTCGGGCCATCCTTCCTGCGCG
TACCCCCGGCCTGTTACTGGCGCGAGTGTGCCCTGGTGATCGTATCGCACCCACGCGGTCAGAGCGCGGAGCGGCTGCGC
GAGAGCGCCCAGGTAGGGGTGCTGGTGGACGCGCTGCTGGAGGTTCCCTTCGCGGTGCTGCTCAGCGACGACGGTGGGCC
CACCACCTGGGGCAGCCCCGCCGCGCTGGCACAGGTCGCGGGGCTGCGCCGGGAGGCCGCCGAGCACTTTGCCTGGAATG
GCCGCACCTATGCGCTGGGCCTCAGCATGGGCGGCCTGCTCGCGCTGCGCAGCGCTCTGCCGGGAAGTCCCTATCCCGTG
TCCGGCGTGGCGCTGATCGACGGGTGGGCCGACCTGCGCGGTGCCTGGAAAACCAGTGCCCGCCGCCGTCAGGAGATTGC
CGAGGCGTACGGCCTCAGCAGCGAGCCCCCAGTGGCCCTCAATCCCCTCGTGCAGGCCGAGCTGAATCCGCCGCTGCCCC
TCTTCGTCCTCGTCAGCCCGGAGGACACCACGGTACCCGCGCGCAGCAATGGCGAGCGCCTCTACGCACGTGCCCAACCG
GGCGTCAGCGCATTCGTGAAAGTGAGCGGGCCGCACCTGGGGGCCAACCGCTTCTCACCCGCAATAGCCCATCAGCTCGC
AGCCTTTTTCGAGCGGCTGGAGGCACAGGCCACAGCGCAGGCGCGGCATTCCCGCCTGCAGCCCTGA

Upstream 100 bases:

>100_bases
ACGCGCTCATCGCTGTGTTGCTGCCCGCTCTCCTGGGCCGCCTCCTCCTGGGGAAGCGGTTGGGCCTGCTGCTGTTCGGA
CGCTAGAGTACGGCCCGCCG

Downstream 100 bases:

>100_bases
AGCAGTCCTGAAGCCCTTTGTTCCCTGAGCGGAACGAACCCACAACGCCCGCGGCCCCCAGCTTAGGGCTGTGTGCTGGC
CGCAGAAGCCTGGAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRRFLVLLLCTLLAALSGSAPAASAPPSGWVLPLPQVPDTVKLDGHLGPSFLRVPPACYWRECALVIVSHPRGQSAERLR
ESAQVGVLVDALLEVPFAVLLSDDGGPTTWGSPAALAQVAGLRREAAEHFAWNGRTYALGLSMGGLLALRSALPGSPYPV
SGVALIDGWADLRGAWKTSARRRQEIAEAYGLSSEPPVALNPLVQAELNPPLPLFVLVSPEDTTVPARSNGERLYARAQP
GVSAFVKVSGPHLGANRFSPAIAHQLAAFFERLEAQATAQARHSRLQP

Sequences:

>Translated_288_residues
MRRFLVLLLCTLLAALSGSAPAASAPPSGWVLPLPQVPDTVKLDGHLGPSFLRVPPACYWRECALVIVSHPRGQSAERLR
ESAQVGVLVDALLEVPFAVLLSDDGGPTTWGSPAALAQVAGLRREAAEHFAWNGRTYALGLSMGGLLALRSALPGSPYPV
SGVALIDGWADLRGAWKTSARRRQEIAEAYGLSSEPPVALNPLVQAELNPPLPLFVLVSPEDTTVPARSNGERLYARAQP
GVSAFVKVSGPHLGANRFSPAIAHQLAAFFERLEAQATAQARHSRLQP
>Mature_288_residues
MRRFLVLLLCTLLAALSGSAPAASAPPSGWVLPLPQVPDTVKLDGHLGPSFLRVPPACYWRECALVIVSHPRGQSAERLR
ESAQVGVLVDALLEVPFAVLLSDDGGPTTWGSPAALAQVAGLRREAAEHFAWNGRTYALGLSMGGLLALRSALPGSPYPV
SGVALIDGWADLRGAWKTSARRRQEIAEAYGLSSEPPVALNPLVQAELNPPLPLFVLVSPEDTTVPARSNGERLYARAQP
GVSAFVKVSGPHLGANRFSPAIAHQLAAFFERLEAQATAQARHSRLQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30572; Mature: 30572

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFLVLLLCTLLAALSGSAPAASAPPSGWVLPLPQVPDTVKLDGHLGPSFLRVPPACYW
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHCCCCHHHH
RECALVIVSHPRGQSAERLRESAQVGVLVDALLEVPFAVLLSDDGGPTTWGSPAALAQVA
HCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH
GLRREAAEHFAWNGRTYALGLSMGGLLALRSALPGSPYPVSGVALIDGWADLRGAWKTSA
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHH
RRRQEIAEAYGLSSEPPVALNPLVQAELNPPLPLFVLVSPEDTTVPARSNGERLYARAQP
HHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCC
GVSAFVKVSGPHLGANRFSPAIAHQLAAFFERLEAQATAQARHSRLQP
CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRFLVLLLCTLLAALSGSAPAASAPPSGWVLPLPQVPDTVKLDGHLGPSFLRVPPACYW
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCEEECCCCCCHHHCCCCHHHH
RECALVIVSHPRGQSAERLRESAQVGVLVDALLEVPFAVLLSDDGGPTTWGSPAALAQVA
HCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHH
GLRREAAEHFAWNGRTYALGLSMGGLLALRSALPGSPYPVSGVALIDGWADLRGAWKTSA
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHH
RRRQEIAEAYGLSSEPPVALNPLVQAELNPPLPLFVLVSPEDTTVPARSNGERLYARAQP
HHHHHHHHHHCCCCCCCEEECCEEEECCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCC
GVSAFVKVSGPHLGANRFSPAIAHQLAAFFERLEAQATAQARHSRLQP
CCEEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA