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The map label for this gene is ygaF [H]

Identifier: 94985095

GI number: 94985095

Start: 1062057

End: 1062515

Strand: Reverse

Name: ygaF [H]

Synonym: Dgeo_0990

Alternate gene names: 94985095

Gene position: 1062515-1062057 (Counterclockwise)

Preceding gene: 94985099

Following gene: 94985092

Centisome position: 43.07

GC content: 68.63

Gene sequence:

>459_bases
ATGCCCCTGCATCCCGGTCAGCCCGCCCCCGAGTTCGACGTTCGCAGCGACGACGGCCAGCGTGTGCGCCTAGCGGACCT
GCGGGGGCGCTGGGTGGTGCTGTATTTCTATCCCCGCGCGAACACACCGGGCTGCTCGGTGGAGGCGCGGCGTTTCGAGG
CCGCCCTGCCCGAGTTTGAGCGCCTGAATGCGGTCGTCATCGGCGTGAGCACGGATACCGAGGCGCGGCAGGCAAATTTC
CGCGACACCTGCGGCCTGAGTTTTCCGCTGATTCCCGACGGGGACCGCACCCTCTCACGCGCTTACGGCGTGATCGGCGG
GCTGGGAGGGCTGCTGGGTGTCGCCGCACGCCAGACCTTTCTCATTGATCCGGAGGGCCGGATTGCCCAGCATTGGCGGA
CGGTGAATCCCGCCACGCACGCGGCGGACGTGCTGCAAGCGCTGCAGGAGCGCGTCTAG

Upstream 100 bases:

>100_bases
GATGAGGTGGAGGCAACCGGCACGGGCGCATTGTAGAGAAGGAAGAGAAGCGGGTGGCTGCTCGCGGCCTACCAGCGGTC
CCCCCCGTACAATGACCCCC

Downstream 100 bases:

>100_bases
CTCAGGCTCGCAAGCGCTTCCCGCATGATCGCGAGACCCGTCGCTGCCTCCTCGTGGGTGAGGATCAGGGGCGGGCTGAT
GCGGATGACTGCCTCGCCGC

Product: redoxin

Products: NA

Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPLHPGQPAPEFDVRSDDGQRVRLADLRGRWVVLYFYPRANTPGCSVEARRFEAALPEFERLNAVVIGVSTDTEARQANF
RDTCGLSFPLIPDGDRTLSRAYGVIGGLGGLLGVAARQTFLIDPEGRIAQHWRTVNPATHAADVLQALQERV

Sequences:

>Translated_152_residues
MPLHPGQPAPEFDVRSDDGQRVRLADLRGRWVVLYFYPRANTPGCSVEARRFEAALPEFERLNAVVIGVSTDTEARQANF
RDTCGLSFPLIPDGDRTLSRAYGVIGGLGGLLGVAARQTFLIDPEGRIAQHWRTVNPATHAADVLQALQERV
>Mature_151_residues
PLHPGQPAPEFDVRSDDGQRVRLADLRGRWVVLYFYPRANTPGCSVEARRFEAALPEFERLNAVVIGVSTDTEARQANFR
DTCGLSFPLIPDGDRTLSRAYGVIGGLGGLLGVAARQTFLIDPEGRIAQHWRTVNPATHAADVLQALQERV

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI4505591, Length=161, Percent_Identity=33.5403726708075, Blast_Score=70, Evalue=7e-13,
Organism=Homo sapiens, GI32455266, Length=161, Percent_Identity=33.5403726708075, Blast_Score=70, Evalue=7e-13,
Organism=Homo sapiens, GI32455264, Length=161, Percent_Identity=33.5403726708075, Blast_Score=70, Evalue=7e-13,
Organism=Homo sapiens, GI32189392, Length=158, Percent_Identity=33.5443037974684, Blast_Score=69, Evalue=2e-12,
Organism=Escherichia coli, GI1788825, Length=153, Percent_Identity=33.9869281045752, Blast_Score=98, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI32565831, Length=135, Percent_Identity=35.5555555555556, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI193204376, Length=135, Percent_Identity=35.5555555555556, Blast_Score=69, Evalue=7e-13,
Organism=Drosophila melanogaster, GI17738015, Length=135, Percent_Identity=35.5555555555556, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21357347, Length=157, Percent_Identity=35.031847133758, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16723; Mature: 16592

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHPGQPAPEFDVRSDDGQRVRLADLRGRWVVLYFYPRANTPGCSVEARRFEAALPEFE
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCC
RLNAVVIGVSTDTEARQANFRDTCGLSFPLIPDGDRTLSRAYGVIGGLGGLLGVAARQTF
CCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
LIDPEGRIAQHWRTVNPATHAADVLQALQERV
EECCCCHHHHHEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PLHPGQPAPEFDVRSDDGQRVRLADLRGRWVVLYFYPRANTPGCSVEARRFEAALPEFE
CCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCC
RLNAVVIGVSTDTEARQANFRDTCGLSFPLIPDGDRTLSRAYGVIGGLGGLLGVAARQTF
CCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEE
LIDPEGRIAQHWRTVNPATHAADVLQALQERV
EECCCCHHHHHEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]