| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985068
Identifier: 94985068
GI number: 94985068
Start: 1029753
End: 1030937
Strand: Reverse
Name: 94985068
Synonym: Dgeo_0963
Alternate gene names: NA
Gene position: 1030937-1029753 (Counterclockwise)
Preceding gene: 94985069
Following gene: 94985067
Centisome position: 41.79
GC content: 71.39
Gene sequence:
>1185_bases GTGAGTGACACCATCCTCGAACTGCAACCCCTCGCGCCGTTGCTGCTGCGCGACGGGCGGCCCTTTGCGGGCGGCGGCGA AGAATCGCGCGCCCAGAGCCTCCCGCTGCCGCTGCCGCACACCCTGGCGGGCTTCATCCGCACCCAGCTCGGCGAGGGCC GGGGCCTGAAGTGGCGCAACCTCAGCGACGACGCGCTGCGCCGCGAGCTGCAGGCCCTGCACAACACCCCCATTCGGGCG CTCCTCCGGCGGGACGAAACGTTTATGTTCCCGGCCCCGCTCAATGCGGTGGTGGACAAGAACGGGCAGATCTTCCGCGC CCTGCCCGCCGAGCTGAGGGAGGGCGAGGGCACCGACGCCCCGGAGGGCCTGCGCCCGCTGCTGCTGACCGACCGCGACG GCAACGCGCCCGGCGACGCCTTCAAGCCGCAGGGCGACTACCGCTACTGGCCCCAGGACGCCATGCAGACCTGGCTGCTG GGCGGCATTCCTGAGAGGCTGGAACGGGTCGAAGGCCCGCCCACCGACGAGCGCACCCACGTCGCCATGAACAGCGAAAC CGGCACCGGCGACGAGGGCAAGCTCTTCACCGTGAGCTACCGCGCCTTCGAGGAGCGCCGCGAAGGTACGTACCATCGCT GGACCCTGCGGGTGAAAACCGACCTCCAGGGTCACATCGCTCCGCTGGGGCACCTGGGCGGCGAGCGGCGGCCCGTCGCC CTGCGCGACTGCGGCAACCAGGGGCAGTGGCCCAATCTGAGCACCTTCGGCGAGCTGAAAGCGGCGCTGGCAGACCCGAA CAGTACCCGCCTGTGCTTTGTCCTCACCAGCCCGGCGCTGTTTGCCGGCGGCTGGAAACCGGGCTGGCTCTCGCTGACGC CGGAAGAGGTGCAGGGACACAGCGGAGCGGGGCTGCCCGCCGGGGTGCGCGAGCTGATGGCGGGCGGGGCGCGGCTGGTG GGGGCCGCGGTGGGCCGCCGCGTGCCGGTGAGCGGCTGGAACCTGCGCGAGAACAAGCCCAAGCCGGTGCGCTGGGCGGT GCCCGCCGGGAGCGTGTACTTCCTGGAGGTGCCCCACGCCTTCAATCGCCAGAAGCTGCTGGAAGCCTGGCTCAAGCCCC TCAGCGACGACCAAGAGGACCAGCGCGACGGCTTCGGCTGCGCGCTGTGGGGAGTGTGGAACTGA
Upstream 100 bases:
>100_bases GCGTCTTGCGAGGCTGGCAGTTTGACAGCCCTGAGCACCTGCGCGAGTTCGCCAACCTGCTCATCATCGCCCGCTTTCTG AGCGGCCAAGGAGACCGAGC
Downstream 100 bases:
>100_bases TGAACGCAAATGCAGAACTGTTGATGTGGCAGGCCCTCACCCCGGTGCACAGCGGCACCGGCCAAAGCAGCGCGGGCGTG ATTGACCTGCCCATCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: CRISPR-Associated Protein Cmr3 Family
Number of amino acids: Translated: 394; Mature: 393
Protein sequence:
>394_residues MSDTILELQPLAPLLLRDGRPFAGGGEESRAQSLPLPLPHTLAGFIRTQLGEGRGLKWRNLSDDALRRELQALHNTPIRA LLRRDETFMFPAPLNAVVDKNGQIFRALPAELREGEGTDAPEGLRPLLLTDRDGNAPGDAFKPQGDYRYWPQDAMQTWLL GGIPERLERVEGPPTDERTHVAMNSETGTGDEGKLFTVSYRAFEERREGTYHRWTLRVKTDLQGHIAPLGHLGGERRPVA LRDCGNQGQWPNLSTFGELKAALADPNSTRLCFVLTSPALFAGGWKPGWLSLTPEEVQGHSGAGLPAGVRELMAGGARLV GAAVGRRVPVSGWNLRENKPKPVRWAVPAGSVYFLEVPHAFNRQKLLEAWLKPLSDDQEDQRDGFGCALWGVWN
Sequences:
>Translated_394_residues MSDTILELQPLAPLLLRDGRPFAGGGEESRAQSLPLPLPHTLAGFIRTQLGEGRGLKWRNLSDDALRRELQALHNTPIRA LLRRDETFMFPAPLNAVVDKNGQIFRALPAELREGEGTDAPEGLRPLLLTDRDGNAPGDAFKPQGDYRYWPQDAMQTWLL GGIPERLERVEGPPTDERTHVAMNSETGTGDEGKLFTVSYRAFEERREGTYHRWTLRVKTDLQGHIAPLGHLGGERRPVA LRDCGNQGQWPNLSTFGELKAALADPNSTRLCFVLTSPALFAGGWKPGWLSLTPEEVQGHSGAGLPAGVRELMAGGARLV GAAVGRRVPVSGWNLRENKPKPVRWAVPAGSVYFLEVPHAFNRQKLLEAWLKPLSDDQEDQRDGFGCALWGVWN >Mature_393_residues SDTILELQPLAPLLLRDGRPFAGGGEESRAQSLPLPLPHTLAGFIRTQLGEGRGLKWRNLSDDALRRELQALHNTPIRAL LRRDETFMFPAPLNAVVDKNGQIFRALPAELREGEGTDAPEGLRPLLLTDRDGNAPGDAFKPQGDYRYWPQDAMQTWLLG GIPERLERVEGPPTDERTHVAMNSETGTGDEGKLFTVSYRAFEERREGTYHRWTLRVKTDLQGHIAPLGHLGGERRPVAL RDCGNQGQWPNLSTFGELKAALADPNSTRLCFVLTSPALFAGGWKPGWLSLTPEEVQGHSGAGLPAGVRELMAGGARLVG AAVGRRVPVSGWNLRENKPKPVRWAVPAGSVYFLEVPHAFNRQKLLEAWLKPLSDDQEDQRDGFGCALWGVWN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43513; Mature: 43382
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTILELQPLAPLLLRDGRPFAGGGEESRAQSLPLPLPHTLAGFIRTQLGEGRGLKWRN CCCCEEEECCCCHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECC LSDDALRRELQALHNTPIRALLRRDETFMFPAPLNAVVDKNGQIFRALPAELREGEGTDA CCHHHHHHHHHHHHCCHHHHHHHCCCCEECCCCCHHHHCCCCCEEEECCHHHHCCCCCCC PEGLRPLLLTDRDGNAPGDAFKPQGDYRYWPQDAMQTWLLGGIPERLERVEGPPTDERTH CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEE VAMNSETGTGDEGKLFTVSYRAFEERREGTYHRWTLRVKTDLQGHIAPLGHLGGERRPVA EEECCCCCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCH LRDCGNQGQWPNLSTFGELKAALADPNSTRLCFVLTSPALFAGGWKPGWLSLTPEEVQGH HEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCCCCCCCCCHHHHCCC SGAGLPAGVRELMAGGARLVGAAVGRRVPVSGWNLRENKPKPVRWAVPAGSVYFLEVPHA CCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCC FNRQKLLEAWLKPLSDDQEDQRDGFGCALWGVWN CCHHHHHHHHHHHCCCCCHHHHCCCEEEEEECCC >Mature Secondary Structure SDTILELQPLAPLLLRDGRPFAGGGEESRAQSLPLPLPHTLAGFIRTQLGEGRGLKWRN CCCEEEECCCCHHHHCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEECC LSDDALRRELQALHNTPIRALLRRDETFMFPAPLNAVVDKNGQIFRALPAELREGEGTDA CCHHHHHHHHHHHHCCHHHHHHHCCCCEECCCCCHHHHCCCCCEEEECCHHHHCCCCCCC PEGLRPLLLTDRDGNAPGDAFKPQGDYRYWPQDAMQTWLLGGIPERLERVEGPPTDERTH CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCEE VAMNSETGTGDEGKLFTVSYRAFEERREGTYHRWTLRVKTDLQGHIAPLGHLGGERRPVA EEECCCCCCCCCCCEEEEEHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCH LRDCGNQGQWPNLSTFGELKAALADPNSTRLCFVLTSPALFAGGWKPGWLSLTPEEVQGH HEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCCCCCCCCCHHHHCCC SGAGLPAGVRELMAGGARLVGAAVGRRVPVSGWNLRENKPKPVRWAVPAGSVYFLEVPHA CCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEECCCC FNRQKLLEAWLKPLSDDQEDQRDGFGCALWGVWN CCHHHHHHHHHHHCCCCCHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA