| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984846
Identifier: 94984846
GI number: 94984846
Start: 800560
End: 801666
Strand: Reverse
Name: 94984846
Synonym: Dgeo_0739
Alternate gene names: NA
Gene position: 801666-800560 (Counterclockwise)
Preceding gene: 94984848
Following gene: 94984843
Centisome position: 32.49
GC content: 67.3
Gene sequence:
>1107_bases TTGCCCCGCGGCCCCTGTTCCCCCCTGCTACAATCCGCCCCGATGCGCCTGACCCTCGTGCCCACCACCGACCCGCGCGT GTACGACGATGCGGTGCGTTCGCTTCCCATCACCAGCGCCCTGCAAGGCTGGGGCTACGGCGAGGCGCGGCGGGTGCTGG GGCAGCTTCCCCTGCGCTACCTGATTCAGGGGCAGGGACGAACGGTGGGGGCGCTGCAACTGCTGCGCAAGCGGCTGGTG CCGGGCTTTGCCATCCTGTACGCTCCGCGTGGCCCAGCTCTGGAATCCCTCGAGCTGCTTCCGGCGGTGGCCGAGGCCGT CAGGAAGGTCGCGCGTCCGACCGACGCCCTCTTGAAAATCGAGCCGCCCTCCCCTATCCCGGCCGATGACAGCGTGCCGA TTCCCGAGACGTTCGGTCCCTTCCGGCGAGCCGAGAGCGAGCAGCCCGAGCACACCATCCTCGCGGACCTGACCCGCACG GAAGACGACCTCTTCGCGGGCCTGCACTCGATGGCCCGCCGCAACGTGCGCACCGCCCAGAAGCTGGGTGTGGTGGCCGG ACGCGACGACGACTTCGAGGCGTTCTGGGAGATTTTCACGGCGACGAACGAACGCGCTCGGCTCGGGGCCTTCCCCCGCG CCTACTATGAGACGATGCTGCGCGAGGGAAACGCATACGGCGGCGAGGCGTATATCGTCCTCTCGCGGTATGAAGGGAAG GCGCTGGCCGGGGGCTTTTTCCTGGCGATGGGCACCGGCACGTATTACCTCTTCGGCGGCAGCGTGCGCGACGACCGCAC CCACCCGGACGGCACGCCCTACAAGGACGTCAAGGCCCCCGACGCTTTCTACTGGAACGCGATGCTGGACGCCAAACGGC GGGGCTATACCCTCTTCGACTTCTGGGGTATCCCCCGCAGGCTCGACGAGACCAAGCACTCCTACGGCGTCTTCAAGATG AAGCTGAAGTTCTCCGAGCAGCGGGTGTGGTATCCCGCCTATGATCTCAACCTGAACCCCGCCGCCCCCGCCATCGTCAA GGCGCTGCGCTGGCGCAAGACGCAGAACAATCTGCGCAAGCGCGGAAGCGCGGAAGACGTGCTGTAG
Upstream 100 bases:
>100_bases GGCGGTCTGGGCGAGGGCTGCGCCGCCGAGCAGCAGCGCGAGCGTCAGGAGGCTTTGTTTCATCATCCCCACTGTACTGC CTGCCGGAGGTCATGCGGCG
Downstream 100 bases:
>100_bases GCCGCGGCCCGCAGCAGAGGGCAACTACTGGGCAGGCTGGGCCCGCCGCGCAGGGACCGTCACGCCCAGGGCCAGCACCG CCGCCGCGCCTGCCAGGATT
Product: methicillin resistance protein
Products: NA
Alternate protein names: FemAB Family Protein; FemA-Related Protein; Protein FemA
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MPRGPCSPLLQSAPMRLTLVPTTDPRVYDDAVRSLPITSALQGWGYGEARRVLGQLPLRYLIQGQGRTVGALQLLRKRLV PGFAILYAPRGPALESLELLPAVAEAVRKVARPTDALLKIEPPSPIPADDSVPIPETFGPFRRAESEQPEHTILADLTRT EDDLFAGLHSMARRNVRTAQKLGVVAGRDDDFEAFWEIFTATNERARLGAFPRAYYETMLREGNAYGGEAYIVLSRYEGK ALAGGFFLAMGTGTYYLFGGSVRDDRTHPDGTPYKDVKAPDAFYWNAMLDAKRRGYTLFDFWGIPRRLDETKHSYGVFKM KLKFSEQRVWYPAYDLNLNPAAPAIVKALRWRKTQNNLRKRGSAEDVL
Sequences:
>Translated_368_residues MPRGPCSPLLQSAPMRLTLVPTTDPRVYDDAVRSLPITSALQGWGYGEARRVLGQLPLRYLIQGQGRTVGALQLLRKRLV PGFAILYAPRGPALESLELLPAVAEAVRKVARPTDALLKIEPPSPIPADDSVPIPETFGPFRRAESEQPEHTILADLTRT EDDLFAGLHSMARRNVRTAQKLGVVAGRDDDFEAFWEIFTATNERARLGAFPRAYYETMLREGNAYGGEAYIVLSRYEGK ALAGGFFLAMGTGTYYLFGGSVRDDRTHPDGTPYKDVKAPDAFYWNAMLDAKRRGYTLFDFWGIPRRLDETKHSYGVFKM KLKFSEQRVWYPAYDLNLNPAAPAIVKALRWRKTQNNLRKRGSAEDVL >Mature_367_residues PRGPCSPLLQSAPMRLTLVPTTDPRVYDDAVRSLPITSALQGWGYGEARRVLGQLPLRYLIQGQGRTVGALQLLRKRLVP GFAILYAPRGPALESLELLPAVAEAVRKVARPTDALLKIEPPSPIPADDSVPIPETFGPFRRAESEQPEHTILADLTRTE DDLFAGLHSMARRNVRTAQKLGVVAGRDDDFEAFWEIFTATNERARLGAFPRAYYETMLREGNAYGGEAYIVLSRYEGKA LAGGFFLAMGTGTYYLFGGSVRDDRTHPDGTPYKDVKAPDAFYWNAMLDAKRRGYTLFDFWGIPRRLDETKHSYGVFKMK LKFSEQRVWYPAYDLNLNPAAPAIVKALRWRKTQNNLRKRGSAEDVL
Specific function: Unknown
COG id: COG2348
COG function: function code V; Uncharacterized protein involved in methicillin resistance
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41269; Mature: 41137
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRGPCSPLLQSAPMRLTLVPTTDPRVYDDAVRSLPITSALQGWGYGEARRVLGQLPLRY CCCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCHHE LIQGQGRTVGALQLLRKRLVPGFAILYAPRGPALESLELLPAVAEAVRKVARPTDALLKI EECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE EPPSPIPADDSVPIPETFGPFRRAESEQPEHTILADLTRTEDDLFAGLHSMARRNVRTAQ CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KLGVVAGRDDDFEAFWEIFTATNERARLGAFPRAYYETMLREGNAYGGEAYIVLSRYEGK HHCCCCCCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCC ALAGGFFLAMGTGTYYLFGGSVRDDRTHPDGTPYKDVKAPDAFYWNAMLDAKRRGYTLFD EEECEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCEEEE FWGIPRRLDETKHSYGVFKMKLKFSEQRVWYPAYDLNLNPAAPAIVKALRWRKTQNNLRK ECCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH RGSAEDVL CCCCCCCC >Mature Secondary Structure PRGPCSPLLQSAPMRLTLVPTTDPRVYDDAVRSLPITSALQGWGYGEARRVLGQLPLRY CCCCCCHHHHCCCCEEEEEECCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCHHE LIQGQGRTVGALQLLRKRLVPGFAILYAPRGPALESLELLPAVAEAVRKVARPTDALLKI EECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE EPPSPIPADDSVPIPETFGPFRRAESEQPEHTILADLTRTEDDLFAGLHSMARRNVRTAQ CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH KLGVVAGRDDDFEAFWEIFTATNERARLGAFPRAYYETMLREGNAYGGEAYIVLSRYEGK HHCCCCCCCCCHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCC ALAGGFFLAMGTGTYYLFGGSVRDDRTHPDGTPYKDVKAPDAFYWNAMLDAKRRGYTLFD EEECEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHCCCEEEE FWGIPRRLDETKHSYGVFKMKLKFSEQRVWYPAYDLNLNPAAPAIVKALRWRKTQNNLRK ECCCCHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH RGSAEDVL CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA