| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is 94984676
Identifier: 94984676
GI number: 94984676
Start: 608538
End: 609191
Strand: Reverse
Name: 94984676
Synonym: Dgeo_0569
Alternate gene names: NA
Gene position: 609191-608538 (Counterclockwise)
Preceding gene: 94984677
Following gene: 94984674
Centisome position: 24.69
GC content: 66.51
Gene sequence:
>654_bases GTGACCCCTCCGCGCCAGCTGCCGCCGTCCGCCGCCTTCAGGCTCCTGCTGGGGGCGGGGCTGGGGCTGCTGGTCGGGTG GCTGGCCCCGGCAGGCTGGCCACTGGTCGCGCAGGTGCTGCTGGGGTGGTGCGCCTTTTGTGTGGTCATGCTGAGCCGCA TCTGGCCCATCCTGCTGAGCGCCACCCCTGAACAGACCCGCATCCTCGCCACCCGTGAAGATGACACGCGTGCGCTGGCG CTGCTGCTCACAGTGATAGCGGCTCTGGTGAGCCTACCGGGGGTGGCGTGGACGCTGGCCCTGGCTCAGGCCCACAAGAA CTGGCAACTGGACCTGACCGCTCTCGCAGCCCTCACCACCGTGCTGTCGTGGCTCCTGGTTCACACTGAGTACACGCTTC ACTACGCGCGGCGCTACTACACCGATGGTGGCGGGGTGCTGTTTCTGAAGGGCAGCGGCACGCTGGACGACCCCGACTAC CGCGACTTCCTGTATCTGGGCCTGACCATTGGGATGACCTATCAGGTCAGTGACACCAGCATCAACTCGCGGGCAATGCG CTGGCTGCTGCTTCAGCACGCCGTCCTCTCCTACGTGTTCGGGACGGTGGTGATCGCGGTCACAGTAGGCGGGGTGTCGA ACCTGCTGGGATAG
Upstream 100 bases:
>100_bases GCGTACGGCAAGCGGGTGATTTTCGGGCGGCAGTACTGAGCAAGGCCCGGACTGAGCAAGGTCCGGGTCGGAGCGGCCCC CCTCCCTTTATCCTGGCCCG
Downstream 100 bases:
>100_bases GGCACCCAGCGAACAGCAATAACCAGAACAGGCAGCAGACTTTACCGCTCACTCGCCATCAGGTACACGCCCCCCAGCAG CACCAGCATTCCCAACCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTPPRQLPPSAAFRLLLGAGLGLLVGWLAPAGWPLVAQVLLGWCAFCVVMLSRIWPILLSATPEQTRILATREDDTRALA LLLTVIAALVSLPGVAWTLALAQAHKNWQLDLTALAALTTVLSWLLVHTEYTLHYARRYYTDGGGVLFLKGSGTLDDPDY RDFLYLGLTIGMTYQVSDTSINSRAMRWLLLQHAVLSYVFGTVVIAVTVGGVSNLLG
Sequences:
>Translated_217_residues MTPPRQLPPSAAFRLLLGAGLGLLVGWLAPAGWPLVAQVLLGWCAFCVVMLSRIWPILLSATPEQTRILATREDDTRALA LLLTVIAALVSLPGVAWTLALAQAHKNWQLDLTALAALTTVLSWLLVHTEYTLHYARRYYTDGGGVLFLKGSGTLDDPDY RDFLYLGLTIGMTYQVSDTSINSRAMRWLLLQHAVLSYVFGTVVIAVTVGGVSNLLG >Mature_216_residues TPPRQLPPSAAFRLLLGAGLGLLVGWLAPAGWPLVAQVLLGWCAFCVVMLSRIWPILLSATPEQTRILATREDDTRALAL LLTVIAALVSLPGVAWTLALAQAHKNWQLDLTALAALTTVLSWLLVHTEYTLHYARRYYTDGGGVLFLKGSGTLDDPDYR DFLYLGLTIGMTYQVSDTSINSRAMRWLLLQHAVLSYVFGTVVIAVTVGGVSNLLG
Specific function: Unknown
COG id: COG4291
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23590; Mature: 23459
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPRQLPPSAAFRLLLGAGLGLLVGWLAPAGWPLVAQVLLGWCAFCVVMLSRIWPILLS CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATPEQTRILATREDDTRALALLLTVIAALVSLPGVAWTLALAQAHKNWQLDLTALAALTT CCCCHHEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH VLSWLLVHTEYTLHYARRYYTDGGGVLFLKGSGTLDDPDYRDFLYLGLTIGMTYQVSDTS HHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCC INSRAMRWLLLQHAVLSYVFGTVVIAVTVGGVSNLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPPRQLPPSAAFRLLLGAGLGLLVGWLAPAGWPLVAQVLLGWCAFCVVMLSRIWPILLS CCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC ATPEQTRILATREDDTRALALLLTVIAALVSLPGVAWTLALAQAHKNWQLDLTALAALTT CCCCHHEEEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHH VLSWLLVHTEYTLHYARRYYTDGGGVLFLKGSGTLDDPDYRDFLYLGLTIGMTYQVSDTS HHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCCCCCHHHHHHHHHHHCEEEEECCCC INSRAMRWLLLQHAVLSYVFGTVVIAVTVGGVSNLLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA