Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is hslO [H]

Identifier: 94984660

GI number: 94984660

Start: 588189

End: 589100

Strand: Reverse

Name: hslO [H]

Synonym: Dgeo_0553

Alternate gene names: 94984660

Gene position: 589100-588189 (Counterclockwise)

Preceding gene: 94984665

Following gene: 94984659

Centisome position: 23.88

GC content: 69.08

Gene sequence:

>912_bases
ATGACATTAGACCCCCTCCCTGCCTCCTTTCTGCTGCGCGGCACTGCCGCAGACAACACCCTGCGCCTCGTGGGGATCGA
CGCGACCCGGATCGTCGAGGAAGCCCGCCTCCGGCACCACCTCAGCAAAACAGCGACCGCCGCGCTGGGCCGCGCGCTGG
CGGCCAGTGCCCTCCTTGCCGTCGTCCTGGGCAAAAAGAGTGACAGCCGTGTGACCGTGCGGATCCAGGGGGACGGCCCG
GTGGGCTGGATCGTCAGCGAGGGCAGCGTCGACGGACAGGTGCGCGGCTACGTGCGCGATCCCGGCGCCGACCTGCCGGT
GCGGGGCACGGACGGCAAGCTGGACGTGCGCGGTCTCGTTGGCACGGAGGGCGAGCTGGCCGTCACCCGGCTGCTCGACA
ATGGCGAACCTTACACCGGCAGCGTGCGCCTGGTCAGCGGGGAGATCGCAGAGGATATCAGCACCTATCTGGGGGTATCC
GAACAGATTCCCAACGCGGTGCTGCTGGGCGTGTACGAGGAAGGCGGGCGGGTCTACCGCGCCGGCGGGCTGCTGGTCCA
GGCCATGCCCGGCGCGACCGACGAGACTCTGGCGCGGTTGGAGGCCAACATCCGCGGGATGGGCCAGCTGACCGATCACC
TGCGGCGGGGCAGCCTGCTGGAAACGATGCAGACGGCCGCCGCCGGGCTCGACCTGGTGCTCGCCCCCGAGGCACAGCCG
GTCCACTTCCAGTGCCGCTGCTCGCGTGAACGGGCGATGGAAAGCCTGCGCTTTTTTGCCCCCACCGAGCGTCAGGAGAT
GATGGACGAGGGCGGCCAGGAGATTGTCTGCCACTGGTGCGGCGAGCATTACCACATCACGCCCGACGAGATCGCCGATC
TGGACGCGCAGCACACGCACGCGCAGGCGTAA

Upstream 100 bases:

>100_bases
CGCAGGATGGAGCACACCCGCAGCAAAGAACAGAAAAGAACTCGTGGGGATTGAGAGGCCTCCCACAGCGGCCTTGAGTC
TCCACTTGTAAGATTTCCTA

Downstream 100 bases:

>100_bases
CGCCGCTCTGCCCGCGAGGCGGTCTGCGCAAGAGAGCCAGATCGTCTCTTTGCGCTGCAGGTGGTCGCCAACGCTCAGTG
AGTGTGGACCGGCGCCCTCA

Product: Hsp33 protein

Products: NA

Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLAVVLGKKSDSRVTVRIQGDGP
VGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLVGTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVS
EQIPNAVLLGVYEEGGRVYRAGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP
VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTHAQA

Sequences:

>Translated_303_residues
MTLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLAVVLGKKSDSRVTVRIQGDGP
VGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLVGTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVS
EQIPNAVLLGVYEEGGRVYRAGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP
VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTHAQA
>Mature_302_residues
TLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLAVVLGKKSDSRVTVRIQGDGPV
GWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLVGTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVSE
QIPNAVLLGVYEEGGRVYRAGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQPV
HFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTHAQA

Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]

COG id: COG1281

COG function: function code O; Disulfide bond chaperones of the HSP33 family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HSP33 family [H]

Homologues:

Organism=Escherichia coli, GI87082260, Length=291, Percent_Identity=28.5223367697594, Blast_Score=98, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000397
- InterPro:   IPR016154
- InterPro:   IPR016153 [H]

Pfam domain/function: PF01430 HSP33 [H]

EC number: NA

Molecular weight: Translated: 32523; Mature: 32392

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLA
CCCCCCCHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLGKKSDSRVTVRIQGDGPVGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLV
HHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEE
GTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVSEQIPNAVLLGVYEEGGRVYR
CCCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCHHHCCCEEEEEEEECCCEEEE
AGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP
ECCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCC
VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTH
EEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCEEECHHHHHCCCCCCCC
AQA
CCC
>Mature Secondary Structure 
TLDPLPASFLLRGTAADNTLRLVGIDATRIVEEARLRHHLSKTATAALGRALAASALLA
CCCCCCHHHEEECCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLGKKSDSRVTVRIQGDGPVGWIVSEGSVDGQVRGYVRDPGADLPVRGTDGKLDVRGLV
HHHCCCCCCEEEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEEE
GTEGELAVTRLLDNGEPYTGSVRLVSGEIAEDISTYLGVSEQIPNAVLLGVYEEGGRVYR
CCCCCEEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCHHHCCCEEEEEEEECCCEEEE
AGGLLVQAMPGATDETLARLEANIRGMGQLTDHLRRGSLLETMQTAAAGLDLVLAPEAQP
ECCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCC
VHFQCRCSRERAMESLRFFAPTERQEMMDEGGQEIVCHWCGEHYHITPDEIADLDAQHTH
EEEEEECCHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCEEECHHHHHCCCCCCCC
AQA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]