| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984628
Identifier: 94984628
GI number: 94984628
Start: 548836
End: 549648
Strand: Reverse
Name: 94984628
Synonym: Dgeo_0521
Alternate gene names: NA
Gene position: 549648-548836 (Counterclockwise)
Preceding gene: 94984632
Following gene: 94984627
Centisome position: 22.28
GC content: 64.7
Gene sequence:
>813_bases ATGCAAGAAGAACGCAAGAGCCTAGGGGGCGCACTCGTCGAGGTGTTCGACGCGGGCGTCACGCTGGTCAAGTCCGAGAT TCGCGCGCTGCTGCGGCAGGTGACGAACGTCATCAAGGCCAAGGGTGTGGGCGTGGTGCTGCTGCTCGCATCGGTTGGGC CGCTGCTGATGGGCCTGGTCTTTCTGATTCTGGCGGTGTTTTACCTGCTGATGCGGCTGGGATTGGGCGCCTGGGTGGCG GCGCTGATCATCGCGCTGCTGGGCTTCATCTTGACGGGCGTGCTGGTGATGCTGGGTCTGCGGCGTTTGAGTGCCGAAAT CCCCCACGACGAGCCGGAGCGCCGCCGCCCCGATCAGCTGACCGAGGACGAGCGGCTCGAAGCCGAGTATCAGGCCGAGC AGGCCGCCCAGGCGCGGGCGTCGGCCAGCAGCGCCAACAGTCTCAGCAGTGCCAATAGTGCCAGCAGTGCGAGTGTCCGT CCTGCGACGGGCACGACAGCCGCCGTTGCAGGCAGCGCGGCGGGCCGCGTGGAAGGCACTGTGACCTTCCCGATGCCGCT GACTGAAGACCGAACGGAGACGCTCCCGGTCTATGGCACCAACCCTGACAACAGCCAGCCCGCACACGGGGGCAGTGTAG ACGACTTCCAGGTCTTCAACGAGGGTGGAGACAGCGCAGAACACCAGCAACGGCGCCACCCCAAGAAGCATGACCCCAAC ATTCAGCACCCCGTTGTGCTCAAGGACCAGCCCGGCATTGACGTGAGCACCAAGCCCACGTTCCAAGAAGACATGAAGAA GGAGGGCTACTGA
Upstream 100 bases:
>100_bases CTCAGGTTTCAGCGTTTCTTGGTTCTGGTGCGCGTCACTCACACCGTTCATTATGCTGGGCATGACTGGCTCTTCCCGTG AGGGGCCTGTGGAGGCAAGC
Downstream 100 bases:
>100_bases TGGCAGACCGAGTGACGGTCGAGCGGGTCACGGTGGATCTCCCAGCGGCCGAGCGCGTCAAGGTGGAGCGGCCAACCACC CCCGAACGCAACCTGGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MQEERKSLGGALVEVFDAGVTLVKSEIRALLRQVTNVIKAKGVGVVLLLASVGPLLMGLVFLILAVFYLLMRLGLGAWVA ALIIALLGFILTGVLVMLGLRRLSAEIPHDEPERRRPDQLTEDERLEAEYQAEQAAQARASASSANSLSSANSASSASVR PATGTTAAVAGSAAGRVEGTVTFPMPLTEDRTETLPVYGTNPDNSQPAHGGSVDDFQVFNEGGDSAEHQQRRHPKKHDPN IQHPVVLKDQPGIDVSTKPTFQEDMKKEGY
Sequences:
>Translated_270_residues MQEERKSLGGALVEVFDAGVTLVKSEIRALLRQVTNVIKAKGVGVVLLLASVGPLLMGLVFLILAVFYLLMRLGLGAWVA ALIIALLGFILTGVLVMLGLRRLSAEIPHDEPERRRPDQLTEDERLEAEYQAEQAAQARASASSANSLSSANSASSASVR PATGTTAAVAGSAAGRVEGTVTFPMPLTEDRTETLPVYGTNPDNSQPAHGGSVDDFQVFNEGGDSAEHQQRRHPKKHDPN IQHPVVLKDQPGIDVSTKPTFQEDMKKEGY >Mature_270_residues MQEERKSLGGALVEVFDAGVTLVKSEIRALLRQVTNVIKAKGVGVVLLLASVGPLLMGLVFLILAVFYLLMRLGLGAWVA ALIIALLGFILTGVLVMLGLRRLSAEIPHDEPERRRPDQLTEDERLEAEYQAEQAAQARASASSANSLSSANSASSASVR PATGTTAAVAGSAAGRVEGTVTFPMPLTEDRTETLPVYGTNPDNSQPAHGGSVDDFQVFNEGGDSAEHQQRRHPKKHDPN IQHPVVLKDQPGIDVSTKPTFQEDMKKEGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28916; Mature: 28916
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEERKSLGGALVEVFDAGVTLVKSEIRALLRQVTNVIKAKGVGVVLLLASVGPLLMGLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FLILAVFYLLMRLGLGAWVAALIIALLGFILTGVLVMLGLRRLSAEIPHDEPERRRPDQL HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC TEDERLEAEYQAEQAAQARASASSANSLSSANSASSASVRPATGTTAAVAGSAAGRVEGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCE VTFPMPLTEDRTETLPVYGTNPDNSQPAHGGSVDDFQVFNEGGDSAEHQQRRHPKKHDPN EEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCCC IQHPVVLKDQPGIDVSTKPTFQEDMKKEGY CCCCEEECCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MQEERKSLGGALVEVFDAGVTLVKSEIRALLRQVTNVIKAKGVGVVLLLASVGPLLMGLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH FLILAVFYLLMRLGLGAWVAALIIALLGFILTGVLVMLGLRRLSAEIPHDEPERRRPDQL HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCC TEDERLEAEYQAEQAAQARASASSANSLSSANSASSASVRPATGTTAAVAGSAAGRVEGT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCE VTFPMPLTEDRTETLPVYGTNPDNSQPAHGGSVDDFQVFNEGGDSAEHQQRRHPKKHDPN EEECCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCCCC IQHPVVLKDQPGIDVSTKPTFQEDMKKEGY CCCCEEECCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA