| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984622
Identifier: 94984622
GI number: 94984622
Start: 542526
End: 543839
Strand: Reverse
Name: 94984622
Synonym: Dgeo_0515
Alternate gene names: NA
Gene position: 543839-542526 (Counterclockwise)
Preceding gene: 94984623
Following gene: 94984618
Centisome position: 22.04
GC content: 67.43
Gene sequence:
>1314_bases TTGACGAATTTCTTCACTGCGCTGGACCTGATTGGCCTGCTTCTGCTGTGTTTTTACAGTTGCCAAATGTTGCTTGCAGC GCTGCTGCCTAAACCCCGGCGTACCTTTGCCGCCGACCCGCAGCTGCGCTTTACCTTTCTGATTCCCGCCCTGAACGAGG CGCAGGTGATCGAGGCGACTGTGCACAACCTGCGCCGCGTCTCACCGAACAGCCGGGTCGCCGTGATTGACGACGACAGC GATGACGCGACGGCGGTGCTCGTCTCGGCGCTGGCCGCGTCTGATCCCAACGTGCTGCTGCTGCGGCGGGTGGCCCCGGA AGCCCGGCAGGGCAAGGGCCGGGCGCTGAACTGGGCCGCCACACAGCTGCTGCAGCGGCTGCGAGCCGAGGGGGCCGATC TGTCCCGCGAGGTCTTTGCCGTAATCGATGCCGACGGGCGCATCGGGCCGGAACTGCTGGAGGAAGCGCGGCAGGCACTG GGTGACCCGCAGGTGATGGGCGCGCAGGCGCGGGTGCGGATCCGGCAGTCGGTGGGACGGCTGTGCCCACAGAATGTGAT CGGGCGCATGCTGGAGCAGCAGCAGGACGTGGAGTTTTTCATCACGCGGCATCTGCAGGTGCTGCGTTCGCGCTGGCATA CCGTCGCGCTGTGTGGCAACGGCCAGTTTATGCGGGCCAGCTATGTGGCCGGACAGTTCGCGCGTGGTCTGGAACCCTGG CCGGACGTGCTGCTCGAGGACTTCGCCAGCGGGCTGGAGGTGCGCCTGGCCGCACCCACGCACCGCCTCGCCTTTCTGGA ACACCCGGTCACGCAACAAGGGTTGCCGAACCTGCGCCGCTTTACCCGGCAGCGTGCCCGCTGGACCCAGGGCACCCTGC AATGCCTTCCCTATCTGCGGCGGCTGTGGCGTACCCCGGTGCCGTTCTTGGCGCGGCTGGACTTCACGTACTTCATTCTG GGACCCTGGCTGAACGCGCTGATTGTGCTGTCCCTGCTGACGCAGCCGCTGCGCGCCCTGACCGGCGCCCACGGCCTGCT GCTGAGCCCCGCCGTCAGCCTCACGGTCAGCCTGCTCAACGTGGGCCTGCAACTGAACTGGCTGGTGCGGTACCAGCTTG AAAACCGGCTGCCGCCCGGGCGCCTGCTGTTCACGGCGGTCAGCTTCCCGGTCTACGGCTTCGCGCTGCTGCTCAGCCTG CCGCTCGCCTTCAAGAACCACTTCACCGGTCGCCGCACCTGGGACAAGAGCGCTCGCCACGCCGAACCCAGCGACCCGGC CCGCGGCGTGAGCGCGGCACCCTCAGGAGACTGA
Upstream 100 bases:
>100_bases GAATGGAGGTCGAATGGAGGCTACCCCGGTGGCCTTCTCTTCATCTCCCATGCATAGTAAGGGGGTAAAACGGGTCCGCT GGGCCTTGCCGAGGTGACTC
Downstream 100 bases:
>100_bases GAGGCCATGACAGCGAGGGGGACGCGGTTGCTGCTGCGTCCCCCTCGCCTTTTTGGCACTACTCCACCCGCTCGCCGCGC TGCAACTTCACGGCACGCAC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Family Protein; Glycosyltransferase; Family 2 Glycosyltransferase; Sensory Transduction Regulatory Protein
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTNFFTALDLIGLLLLCFYSCQMLLAALLPKPRRTFAADPQLRFTFLIPALNEAQVIEATVHNLRRVSPNSRVAVIDDDS DDATAVLVSALAASDPNVLLLRRVAPEARQGKGRALNWAATQLLQRLRAEGADLSREVFAVIDADGRIGPELLEEARQAL GDPQVMGAQARVRIRQSVGRLCPQNVIGRMLEQQQDVEFFITRHLQVLRSRWHTVALCGNGQFMRASYVAGQFARGLEPW PDVLLEDFASGLEVRLAAPTHRLAFLEHPVTQQGLPNLRRFTRQRARWTQGTLQCLPYLRRLWRTPVPFLARLDFTYFIL GPWLNALIVLSLLTQPLRALTGAHGLLLSPAVSLTVSLLNVGLQLNWLVRYQLENRLPPGRLLFTAVSFPVYGFALLLSL PLAFKNHFTGRRTWDKSARHAEPSDPARGVSAAPSGD
Sequences:
>Translated_437_residues MTNFFTALDLIGLLLLCFYSCQMLLAALLPKPRRTFAADPQLRFTFLIPALNEAQVIEATVHNLRRVSPNSRVAVIDDDS DDATAVLVSALAASDPNVLLLRRVAPEARQGKGRALNWAATQLLQRLRAEGADLSREVFAVIDADGRIGPELLEEARQAL GDPQVMGAQARVRIRQSVGRLCPQNVIGRMLEQQQDVEFFITRHLQVLRSRWHTVALCGNGQFMRASYVAGQFARGLEPW PDVLLEDFASGLEVRLAAPTHRLAFLEHPVTQQGLPNLRRFTRQRARWTQGTLQCLPYLRRLWRTPVPFLARLDFTYFIL GPWLNALIVLSLLTQPLRALTGAHGLLLSPAVSLTVSLLNVGLQLNWLVRYQLENRLPPGRLLFTAVSFPVYGFALLLSL PLAFKNHFTGRRTWDKSARHAEPSDPARGVSAAPSGD >Mature_436_residues TNFFTALDLIGLLLLCFYSCQMLLAALLPKPRRTFAADPQLRFTFLIPALNEAQVIEATVHNLRRVSPNSRVAVIDDDSD DATAVLVSALAASDPNVLLLRRVAPEARQGKGRALNWAATQLLQRLRAEGADLSREVFAVIDADGRIGPELLEEARQALG DPQVMGAQARVRIRQSVGRLCPQNVIGRMLEQQQDVEFFITRHLQVLRSRWHTVALCGNGQFMRASYVAGQFARGLEPWP DVLLEDFASGLEVRLAAPTHRLAFLEHPVTQQGLPNLRRFTRQRARWTQGTLQCLPYLRRLWRTPVPFLARLDFTYFILG PWLNALIVLSLLTQPLRALTGAHGLLLSPAVSLTVSLLNVGLQLNWLVRYQLENRLPPGRLLFTAVSFPVYGFALLLSLP LAFKNHFTGRRTWDKSARHAEPSDPARGVSAAPSGD
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48749; Mature: 48618
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFFTALDLIGLLLLCFYSCQMLLAALLPKPRRTFAADPQLRFTFLIPALNEAQVIEAT CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH VHNLRRVSPNSRVAVIDDDSDDATAVLVSALAASDPNVLLLRRVAPEARQGKGRALNWAA HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCCEEHHHH TQLLQRLRAEGADLSREVFAVIDADGRIGPELLEEARQALGDPQVMGAQARVRIRQSVGR HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH LCPQNVIGRMLEQQQDVEFFITRHLQVLRSRWHTVALCGNGQFMRASYVAGQFARGLEPW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHCCCCCH PDVLLEDFASGLEVRLAAPTHRLAFLEHPVTQQGLPNLRRFTRQRARWTQGTLQCLPYLR HHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLWRTPVPFLARLDFTYFILGPWLNALIVLSLLTQPLRALTGAHGLLLSPAVSLTVSLLN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VGLQLNWLVRYQLENRLPPGRLLFTAVSFPVYGFALLLSLPLAFKNHFTGRRTWDKSARH CCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AEPSDPARGVSAAPSGD CCCCCCCCCCCCCCCCC >Mature Secondary Structure TNFFTALDLIGLLLLCFYSCQMLLAALLPKPRRTFAADPQLRFTFLIPALNEAQVIEAT CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHH VHNLRRVSPNSRVAVIDDDSDDATAVLVSALAASDPNVLLLRRVAPEARQGKGRALNWAA HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEHHCCHHHCCCCCEEHHHH TQLLQRLRAEGADLSREVFAVIDADGRIGPELLEEARQALGDPQVMGAQARVRIRQSVGR HHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHH LCPQNVIGRMLEQQQDVEFFITRHLQVLRSRWHTVALCGNGQFMRASYVAGQFARGLEPW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEHHHHHHHHHHCCCCCH PDVLLEDFASGLEVRLAAPTHRLAFLEHPVTQQGLPNLRRFTRQRARWTQGTLQCLPYLR HHHHHHHHHCCCEEEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RLWRTPVPFLARLDFTYFILGPWLNALIVLSLLTQPLRALTGAHGLLLSPAVSLTVSLLN HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VGLQLNWLVRYQLENRLPPGRLLFTAVSFPVYGFALLLSLPLAFKNHFTGRRTWDKSARH CCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AEPSDPARGVSAAPSGD CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA