| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984587
Identifier: 94984587
GI number: 94984587
Start: 497535
End: 498179
Strand: Reverse
Name: 94984587
Synonym: Dgeo_0480
Alternate gene names: NA
Gene position: 498179-497535 (Counterclockwise)
Preceding gene: 94984596
Following gene: 94984585
Centisome position: 20.19
GC content: 68.84
Gene sequence:
>645_bases GTGACGAAAGCAGCCGCGTCCAGCACCACCAACCGCACCGCCGGCACCCGCCGCCAAACCGAGCGGATGGGCACTGACCT GCTGGCCCTGCGCGCGCAACTGGCCCGCGCCGAGAAGGAAGCCCGCCGCGCCCCCACGCCACCCCCGACACGGCCCGCCC ATCTCCAGCTCAAACCCGTCAAACCCCAGCGTGAGGCCGAGCTGGTGGGCATTGACACGAGCGACCACTCGCTGGCCCGT GCCCATGCTCGCCTGCGTGACGCCGTGTACGACGGCAGATACAGCCTGTGTCCCCACGCGACTCGCCACGCCCGCGCGGA AGGCTTTTTGGAACACGACATCATCCAGGTGCTGGTGGCTGGGCGCGTCCGCGCCGTGTACCCGGAAGACCACCGCTGGC TGGTCTGCGGCTATTTCGAAGCGTGCGGCGTGGCGCTGCCCCTGCACGTCGTGATTGAGCACCAACGCGATGGCCACCTG GATGTCGTGACCGCCTTCGTGCCCAAGCACCCGCACCACATCATCAGCCGCGCGCGCCTCGCCGTGATGCTGCGCTATGA CGACGAGCAGATTCGGACCCGCACGGCCCCGGTGGGCAATAAGCCCGGTCACCGCAGCAAGGGGAAGTGGAAGAAGGGGG CGTGA
Upstream 100 bases:
>100_bases TGTTTGAGGGGGCTTTTCTTTTTGGAGAGGAAGCTGCGACGTCCCGCCCTTCCCTCCAGAACCAAGAGCAGGGGGAAGAC CGACCGATGGGAGGCCCGCC
Downstream 100 bases:
>100_bases CCCAGCCCGCCACTGCGCTTTGCCCGGAGAAGCCACCGCCTCAAGCAGGCTCCTCCGGCATGCTGTTTAGGCGCCAGAGC GGCCCTCAGTTATAGTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 214; Mature: 213
Protein sequence:
>214_residues MTKAAASSTTNRTAGTRRQTERMGTDLLALRAQLARAEKEARRAPTPPPTRPAHLQLKPVKPQREAELVGIDTSDHSLAR AHARLRDAVYDGRYSLCPHATRHARAEGFLEHDIIQVLVAGRVRAVYPEDHRWLVCGYFEACGVALPLHVVIEHQRDGHL DVVTAFVPKHPHHIISRARLAVMLRYDDEQIRTRTAPVGNKPGHRSKGKWKKGA
Sequences:
>Translated_214_residues MTKAAASSTTNRTAGTRRQTERMGTDLLALRAQLARAEKEARRAPTPPPTRPAHLQLKPVKPQREAELVGIDTSDHSLAR AHARLRDAVYDGRYSLCPHATRHARAEGFLEHDIIQVLVAGRVRAVYPEDHRWLVCGYFEACGVALPLHVVIEHQRDGHL DVVTAFVPKHPHHIISRARLAVMLRYDDEQIRTRTAPVGNKPGHRSKGKWKKGA >Mature_213_residues TKAAASSTTNRTAGTRRQTERMGTDLLALRAQLARAEKEARRAPTPPPTRPAHLQLKPVKPQREAELVGIDTSDHSLARA HARLRDAVYDGRYSLCPHATRHARAEGFLEHDIIQVLVAGRVRAVYPEDHRWLVCGYFEACGVALPLHVVIEHQRDGHLD VVTAFVPKHPHHIISRARLAVMLRYDDEQIRTRTAPVGNKPGHRSKGKWKKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23957; Mature: 23826
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKAAASSTTNRTAGTRRQTERMGTDLLALRAQLARAEKEARRAPTPPPTRPAHLQLKPV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC KPQREAELVGIDTSDHSLARAHARLRDAVYDGRYSLCPHATRHARAEGFLEHDIIQVLVA CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GRVRAVYPEDHRWLVCGYFEACGVALPLHVVIEHQRDGHLDVVTAFVPKHPHHIISRARL CCEEEECCCCCCEEEEECHHHCCHHCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHE AVMLRYDDEQIRTRTAPVGNKPGHRSKGKWKKGA EEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TKAAASSTTNRTAGTRRQTERMGTDLLALRAQLARAEKEARRAPTPPPTRPAHLQLKPV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECC KPQREAELVGIDTSDHSLARAHARLRDAVYDGRYSLCPHATRHARAEGFLEHDIIQVLVA CCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH GRVRAVYPEDHRWLVCGYFEACGVALPLHVVIEHQRDGHLDVVTAFVPKHPHHIISRARL CCEEEECCCCCCEEEEECHHHCCHHCEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHE AVMLRYDDEQIRTRTAPVGNKPGHRSKGKWKKGA EEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA