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The map label for this gene is rnr [H]

Identifier: 94984568

GI number: 94984568

Start: 473076

End: 476624

Strand: Reverse

Name: rnr [H]

Synonym: Dgeo_0460

Alternate gene names: 94984568

Gene position: 476624-473076 (Counterclockwise)

Preceding gene: 94984569

Following gene: 94984565

Centisome position: 19.32

GC content: 68.61

Gene sequence:

>3549_bases
GTGGCCGAGGCCGCGACACTCGCCCCCCCCAAGCGCACCCCACGGCAGGCCAAAGCTTCCACCGCAGCGCCCCCACCCGT
GGCTGAAGGCAGCGCGGCGGCCGAGCCAACCGCAACCAAGCCCCGCCGGAGCCGCAGGGCGTCGCCCGCCGTCAAGCCTG
AGGACGGGCAAACGTCCGCCGAACCTGCACCCCAGCCCGAAGCTCCCGCCCGTCCCTCCCGCCGCGGCCGCAAGGCACAG
ACCGCTGAGCTACCCCAGCTCGAACCGGTCCAGCGTGAGCCAGAGGCCGTGACGGCGCAGGCTCCCACCGAAGAGCGCCC
GACAAGGGCGCGACGGGGGCGCAAGTCCAAAGCCGAGGCTGCCCCGGAGGTCCTCCCGCCTGTCGCGGAACCGACCGACC
CCGTGCTGTTGGAGGTCCCCAAGCCAACGCGCCGAGGCCGCAAGTCCCGGGCCGCCGCGCCCGAAGCCGCGCCCGAAGCC
GCGCCCGAACCTGCACCGGTCCTGCCCGACGTGCCCCTTGATGAGGTGCTGGGCGGAGTCGAACCCGTGGAGGTTGAGGA
GTCAACGCCGGACGCCGAGGCCACGCTGAGCGTTACCGGGAAGGCCCAGACGGATCCCCCCGAACCCGTGGTGGACACGC
CGCGGGTGGAGGAAGTGGATCTTCCTGGCCGCCACCCCTCAGCGGCAGCCACGCCTCCAGCCCGCCTCACCCACCCAGAG
GAGGTGGAGGAACAGGCCGAAGAGACCGCCGATCCCGCCCGCGAGCTGGTGATCGCGCAGCTGCGCAAGCTGGGCCGACC
GATTCACGTCCGCGACCTGGAACGCACCTTTACCCGCCAGATGCTCGACCGACTGGGGGGCTGGCGCGATCTCGAGGCGT
TGTTGGACGACCTCACTCGGACGGGCGAGGTGATCCGCACACGGCGGCGCACCTACGGCCTGCCCGAGGCGATGAGCCTG
GTCCGTGGCCGTTTTCAGGCGTCACCCACCGGCTTCGGCTTCGTGATTCCCGATGCGGGCGGCGAGGATTTCTACGTCGC
GCCGGAAGACACCCTGGAAGCCTGGAACGGCGACACCGTGCTCGTGCGGATGGAAGGGCGGGGTGACAGCGGACGCAGCC
CAGGACCCCGCCGGGGCCAGCGCGGCGACGGCAGCCCACGGGCCAGCGTGGCCCGCATCGTGCAGCGCGCCTACCGGCAC
CTCGTCGGCACGCTGGAATTCAGCAAAGGCCACCCGATCCTCAAGGCCGATGACCCCCGTGCCCGTCACCGCATCCTGCT
GCTCCCCGAGGGGCTGGAGGGGCTAGCAAGCGGTGCCAGGGTCGTGGCCGAGCTGTATTGGCCCGAGCAGACCGGCGAGG
ACGAGGTCTTCGGCCAGGTCATCCGCGTGCTGGGCGAACAGGACGACCCGGCCACCGAGACCGAAGCGGTGATTGTGAAG
TACGGGCTGCGCGGCGAGTTCCCGGCGGACGTGCTGGAGGAGGCAAATGCCATCCCCACCCGGATTCCGCCCGAGTCGCT
GGTGGGCCGCCTGGACCTGCGCGAGTTCAACATCTTCACGGTGGACGGGCGCGACGCGAAGGACTTTGACGACGCGATCC
ACATCCAGCCCACGCCGGAAGGCACTTTTGTGGTGGGCGTCCACATCGCGGACGTGAGCCATTACGTGCGGGAGGGCACT
CCGCTGGATCAAGAGGCCTATGCCCGCGCCACCAGCGTCTACCTGCCGGGCCGGGTGCTGCCCATGTTGCCCGAGCACCT
CAGCAACGGGGTATGCAGCCTGGTGCCCTTTGAGGACCGCCTCACCGTGACGGCACTGATCGAACTCTCCGCCGAGGGTG
ACATTCTGGATGTGAAGCTCGCGCCCAGCGTCATCAACAGCAAGGCCCGCCTCACCTACGACGAGGTACAGGCCTATTCA
GAGGCGACCTCGACGCTGCCTGAACACGCCCGACATCTGGAAGGCGACCTGCACCTGCTGCTCAAGATCACCTCCAAACT
GCGCCAGAAGCGGCTGCGCGAGGGTTCACTGGACTTCAAGCTGCGCGAGGTGAAGGTGGATGTGGGGCCGGACGGGCGCA
TGGAGCTGATCCCGATTCACGAGGAAACGGCCCGCGGCATGATCGAGGATCTGATGCTGCTCGCCAACAAGGTGGTCGCG
CACTACCTGATCGAGCGCGGCATTCCTACCCTATTCCGCATCCACGAGGAACCCACCCTCCAGCGCTTCCAGGAGGCGAC
AGCGGCCATTGCGCGCCTGGGCCTCGCGTTCCCCGGCGGAGAGCCGACCCCGCAAGCCTACCAGGCGGTGCTGAAAGCGG
TGCGGGGCACGCCACGCGAAAGTGTGGTGAACACGCTGCTGCTGCGCTCCTTGCAGCAGGCAAAGTACGCGGGCGAAAAT
CTGGGCCACTTTGGTCTGGCCTTTGCCGAGTACCTGCACTTTACCTCCCCGATTCGCCGCTACCCGGATCTCTTCGTCCA
CCGGGTGCTTAAGGCGGTGCTGTCTGGTGACCTGAAGGCGGGGAGCCGCGCGGTGGCGGAGCTGCGCTCTCAGCTGCCTG
CGATGGGAGACCACACCTCCGAGCGCGAGCGCAAGGCTGCTGAGGCCGAACGGGACCTCACCAAGTACTACCAGGCGAAG
TGGGCGCAGGAGCACCTGGGCGAACGCTTCTCCGGCAACGTGACGGGCGTGGTGTCGAGTGGCCTCTTTGTCGCGCTCGA
CAATGGTGTGGAGGGCAAGCTGCACATCTCCAACCTCGACGACGACTACTACATCTACCTTGAGGACGCGCAGATGCTGC
GGGGCCGCTCCGGCGGGCGTACCTTCCGCCTGGGCGATCCGATCACGGTCACCATCAGCCAGGTCAATCCCCTGGCCCGT
CAGATTGATTTCACCCAGGAGAACGACATGGACAGCAACGACAACACGGCCCGGCCGCGTGCCCGCCGCCGCGAGGACCG
CGAGGCCGAAAAGCGGCAGAAACTCCAGAGCGTCAATCCTGCGCCCCCCCGCAAGTTCACCCTGGACGATCCACAACCTG
CCGTGCCCAGCGCGCCCCCTCGCCAGTCGGGCCAGGGCCGCGGAGGACGCGGTCAGGGCCAACGCGAAGGCAGCCAGCGC
GAAGCGAACCCGTCGGGCGGACGTGCCCCGCTGCGCCAAAGCGGTAGCTTCAAGCGGCGGGTAATCACGCTGGAGCGGCC
CCGCAACGAACACTTGCGGCCCGTCAACATCACCGTGCAGCGCATGTACTTCGGAGACTGGACCGTGGACAACCTGCCCC
CCGATGACGGACAGCACGGCGGGCGTGGCTTTGACCGCAGTGACCGCGGCGGACGTGGCCCCGGCTTCTCGCGCGGCGGC
AATGATCGTGGCGCGGTGCGCGACCTGAATGGCCGCCAGGGTGGGAGCCGCCAAGTCCGCCCGTCGGCACCGCCCCCACA
AGTGACGTCTCAGGCAGACGCTGCTCAACCCGGCAACGACACAGATGGCAAACGCCGTCGCCGTCGCCGTGGCCGCCGAG
GGGGCAACGGGAACAGTTCGCAAGGGTAG

Upstream 100 bases:

>100_bases
CGCCGAAGAACAACCGAAGACCGGGAGCCGAGCTGGACGCAGGTCAAAGCGTGCCGCACCGTCCGCCACTCCCGCCGAAC
CCGCAGATCCCCCCTCGCCG

Downstream 100 bases:

>100_bases
GCCGCACTCAAGCGGAGCGGGTCAGGGGGCAACCTCTGGCCCCCGCTTGTATGCGGCGGTGGTTGGTGTGACGGGGTGAC
CGCGGCGAGTGCCGGCAACG

Product: ribonuclease R

Products: NA

Alternate protein names: RNase R; VacB protein homolog [H]

Number of amino acids: Translated: 1182; Mature: 1181

Protein sequence:

>1182_residues
MAEAATLAPPKRTPRQAKASTAAPPPVAEGSAAAEPTATKPRRSRRASPAVKPEDGQTSAEPAPQPEAPARPSRRGRKAQ
TAELPQLEPVQREPEAVTAQAPTEERPTRARRGRKSKAEAAPEVLPPVAEPTDPVLLEVPKPTRRGRKSRAAAPEAAPEA
APEPAPVLPDVPLDEVLGGVEPVEVEESTPDAEATLSVTGKAQTDPPEPVVDTPRVEEVDLPGRHPSAAATPPARLTHPE
EVEEQAEETADPARELVIAQLRKLGRPIHVRDLERTFTRQMLDRLGGWRDLEALLDDLTRTGEVIRTRRRTYGLPEAMSL
VRGRFQASPTGFGFVIPDAGGEDFYVAPEDTLEAWNGDTVLVRMEGRGDSGRSPGPRRGQRGDGSPRASVARIVQRAYRH
LVGTLEFSKGHPILKADDPRARHRILLLPEGLEGLASGARVVAELYWPEQTGEDEVFGQVIRVLGEQDDPATETEAVIVK
YGLRGEFPADVLEEANAIPTRIPPESLVGRLDLREFNIFTVDGRDAKDFDDAIHIQPTPEGTFVVGVHIADVSHYVREGT
PLDQEAYARATSVYLPGRVLPMLPEHLSNGVCSLVPFEDRLTVTALIELSAEGDILDVKLAPSVINSKARLTYDEVQAYS
EATSTLPEHARHLEGDLHLLLKITSKLRQKRLREGSLDFKLREVKVDVGPDGRMELIPIHEETARGMIEDLMLLANKVVA
HYLIERGIPTLFRIHEEPTLQRFQEATAAIARLGLAFPGGEPTPQAYQAVLKAVRGTPRESVVNTLLLRSLQQAKYAGEN
LGHFGLAFAEYLHFTSPIRRYPDLFVHRVLKAVLSGDLKAGSRAVAELRSQLPAMGDHTSERERKAAEAERDLTKYYQAK
WAQEHLGERFSGNVTGVVSSGLFVALDNGVEGKLHISNLDDDYYIYLEDAQMLRGRSGGRTFRLGDPITVTISQVNPLAR
QIDFTQENDMDSNDNTARPRARRREDREAEKRQKLQSVNPAPPRKFTLDDPQPAVPSAPPRQSGQGRGGRGQGQREGSQR
EANPSGGRAPLRQSGSFKRRVITLERPRNEHLRPVNITVQRMYFGDWTVDNLPPDDGQHGGRGFDRSDRGGRGPGFSRGG
NDRGAVRDLNGRQGGSRQVRPSAPPPQVTSQADAAQPGNDTDGKRRRRRRGRRGGNGNSSQG

Sequences:

>Translated_1182_residues
MAEAATLAPPKRTPRQAKASTAAPPPVAEGSAAAEPTATKPRRSRRASPAVKPEDGQTSAEPAPQPEAPARPSRRGRKAQ
TAELPQLEPVQREPEAVTAQAPTEERPTRARRGRKSKAEAAPEVLPPVAEPTDPVLLEVPKPTRRGRKSRAAAPEAAPEA
APEPAPVLPDVPLDEVLGGVEPVEVEESTPDAEATLSVTGKAQTDPPEPVVDTPRVEEVDLPGRHPSAAATPPARLTHPE
EVEEQAEETADPARELVIAQLRKLGRPIHVRDLERTFTRQMLDRLGGWRDLEALLDDLTRTGEVIRTRRRTYGLPEAMSL
VRGRFQASPTGFGFVIPDAGGEDFYVAPEDTLEAWNGDTVLVRMEGRGDSGRSPGPRRGQRGDGSPRASVARIVQRAYRH
LVGTLEFSKGHPILKADDPRARHRILLLPEGLEGLASGARVVAELYWPEQTGEDEVFGQVIRVLGEQDDPATETEAVIVK
YGLRGEFPADVLEEANAIPTRIPPESLVGRLDLREFNIFTVDGRDAKDFDDAIHIQPTPEGTFVVGVHIADVSHYVREGT
PLDQEAYARATSVYLPGRVLPMLPEHLSNGVCSLVPFEDRLTVTALIELSAEGDILDVKLAPSVINSKARLTYDEVQAYS
EATSTLPEHARHLEGDLHLLLKITSKLRQKRLREGSLDFKLREVKVDVGPDGRMELIPIHEETARGMIEDLMLLANKVVA
HYLIERGIPTLFRIHEEPTLQRFQEATAAIARLGLAFPGGEPTPQAYQAVLKAVRGTPRESVVNTLLLRSLQQAKYAGEN
LGHFGLAFAEYLHFTSPIRRYPDLFVHRVLKAVLSGDLKAGSRAVAELRSQLPAMGDHTSERERKAAEAERDLTKYYQAK
WAQEHLGERFSGNVTGVVSSGLFVALDNGVEGKLHISNLDDDYYIYLEDAQMLRGRSGGRTFRLGDPITVTISQVNPLAR
QIDFTQENDMDSNDNTARPRARRREDREAEKRQKLQSVNPAPPRKFTLDDPQPAVPSAPPRQSGQGRGGRGQGQREGSQR
EANPSGGRAPLRQSGSFKRRVITLERPRNEHLRPVNITVQRMYFGDWTVDNLPPDDGQHGGRGFDRSDRGGRGPGFSRGG
NDRGAVRDLNGRQGGSRQVRPSAPPPQVTSQADAAQPGNDTDGKRRRRRRGRRGGNGNSSQG
>Mature_1181_residues
AEAATLAPPKRTPRQAKASTAAPPPVAEGSAAAEPTATKPRRSRRASPAVKPEDGQTSAEPAPQPEAPARPSRRGRKAQT
AELPQLEPVQREPEAVTAQAPTEERPTRARRGRKSKAEAAPEVLPPVAEPTDPVLLEVPKPTRRGRKSRAAAPEAAPEAA
PEPAPVLPDVPLDEVLGGVEPVEVEESTPDAEATLSVTGKAQTDPPEPVVDTPRVEEVDLPGRHPSAAATPPARLTHPEE
VEEQAEETADPARELVIAQLRKLGRPIHVRDLERTFTRQMLDRLGGWRDLEALLDDLTRTGEVIRTRRRTYGLPEAMSLV
RGRFQASPTGFGFVIPDAGGEDFYVAPEDTLEAWNGDTVLVRMEGRGDSGRSPGPRRGQRGDGSPRASVARIVQRAYRHL
VGTLEFSKGHPILKADDPRARHRILLLPEGLEGLASGARVVAELYWPEQTGEDEVFGQVIRVLGEQDDPATETEAVIVKY
GLRGEFPADVLEEANAIPTRIPPESLVGRLDLREFNIFTVDGRDAKDFDDAIHIQPTPEGTFVVGVHIADVSHYVREGTP
LDQEAYARATSVYLPGRVLPMLPEHLSNGVCSLVPFEDRLTVTALIELSAEGDILDVKLAPSVINSKARLTYDEVQAYSE
ATSTLPEHARHLEGDLHLLLKITSKLRQKRLREGSLDFKLREVKVDVGPDGRMELIPIHEETARGMIEDLMLLANKVVAH
YLIERGIPTLFRIHEEPTLQRFQEATAAIARLGLAFPGGEPTPQAYQAVLKAVRGTPRESVVNTLLLRSLQQAKYAGENL
GHFGLAFAEYLHFTSPIRRYPDLFVHRVLKAVLSGDLKAGSRAVAELRSQLPAMGDHTSERERKAAEAERDLTKYYQAKW
AQEHLGERFSGNVTGVVSSGLFVALDNGVEGKLHISNLDDDYYIYLEDAQMLRGRSGGRTFRLGDPITVTISQVNPLARQ
IDFTQENDMDSNDNTARPRARRREDREAEKRQKLQSVNPAPPRKFTLDDPQPAVPSAPPRQSGQGRGGRGQGQREGSQRE
ANPSGGRAPLRQSGSFKRRVITLERPRNEHLRPVNITVQRMYFGDWTVDNLPPDDGQHGGRGFDRSDRGGRGPGFSRGGN
DRGAVRDLNGRQGGSRQVRPSAPPPQVTSQADAAQPGNDTDGKRRRRRRGRRGGNGNSSQG

Specific function: 3'-5'exoribonuclease that participates in an essential cell function. Acts nonspecifically on poly(A), poly(U) and ribosomal RNAs [H]

COG id: COG0557

COG function: function code K; Exoribonuclease R

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI134288890, Length=506, Percent_Identity=32.2134387351779, Blast_Score=214, Evalue=4e-55,
Organism=Homo sapiens, GI190014625, Length=491, Percent_Identity=31.7718940936864, Blast_Score=191, Evalue=3e-48,
Organism=Homo sapiens, GI190014623, Length=491, Percent_Identity=31.7718940936864, Blast_Score=191, Evalue=4e-48,
Organism=Homo sapiens, GI19115966, Length=513, Percent_Identity=29.0448343079922, Blast_Score=156, Evalue=1e-37,
Organism=Homo sapiens, GI219521928, Length=513, Percent_Identity=29.0448343079922, Blast_Score=155, Evalue=2e-37,
Organism=Homo sapiens, GI156105693, Length=133, Percent_Identity=38.3458646616541, Blast_Score=82, Evalue=4e-15,
Organism=Homo sapiens, GI156105695, Length=133, Percent_Identity=38.3458646616541, Blast_Score=81, Evalue=5e-15,
Organism=Escherichia coli, GI87082383, Length=739, Percent_Identity=34.7767253044655, Blast_Score=403, Evalue=1e-113,
Organism=Escherichia coli, GI1787542, Length=655, Percent_Identity=25.6488549618321, Blast_Score=155, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI212645896, Length=656, Percent_Identity=27.7439024390244, Blast_Score=193, Evalue=6e-49,
Organism=Caenorhabditis elegans, GI17553506, Length=412, Percent_Identity=33.0097087378641, Blast_Score=191, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6324552, Length=581, Percent_Identity=29.2598967297762, Blast_Score=189, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6320499, Length=412, Percent_Identity=26.6990291262136, Blast_Score=100, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6323943, Length=352, Percent_Identity=23.5795454545455, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24649634, Length=600, Percent_Identity=29.3333333333333, Blast_Score=201, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24654592, Length=508, Percent_Identity=28.3464566929134, Blast_Score=166, Evalue=1e-40,
Organism=Drosophila melanogaster, GI19922976, Length=508, Percent_Identity=28.3464566929134, Blast_Score=165, Evalue=2e-40,
Organism=Drosophila melanogaster, GI24654597, Length=508, Percent_Identity=28.3464566929134, Blast_Score=165, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011129
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR013223
- InterPro:   IPR001900
- InterPro:   IPR022966
- InterPro:   IPR004476
- InterPro:   IPR011805 [H]

Pfam domain/function: PF08206 OB_RNB; PF00773 RNB; PF00575 S1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 129564; Mature: 129433

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50126 S1 ; PS01175 RIBONUCLEASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEAATLAPPKRTPRQAKASTAAPPPVAEGSAAAEPTATKPRRSRRASPAVKPEDGQTSA
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
EPAPQPEAPARPSRRGRKAQTAELPQLEPVQREPEAVTAQAPTEERPTRARRGRKSKAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCHHHHC
APEVLPPVAEPTDPVLLEVPKPTRRGRKSRAAAPEAAPEAAPEPAPVLPDVPLDEVLGGV
CCHHCCCCCCCCCCEEEECCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
EPVEVEESTPDAEATLSVTGKAQTDPPEPVVDTPRVEEVDLPGRHPSAAATPPARLTHPE
CCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EVEEQAEETADPARELVIAQLRKLGRPIHVRDLERTFTRQMLDRLGGWRDLEALLDDLTR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TGEVIRTRRRTYGLPEAMSLVRGRFQASPTGFGFVIPDAGGEDFYVAPEDTLEAWNGDTV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHHHHCCCCEE
LVRMEGRGDSGRSPGPRRGQRGDGSPRASVARIVQRAYRHLVGTLEFSKGHPILKADDPR
EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCCCH
ARHRILLLPEGLEGLASGARVVAELYWPEQTGEDEVFGQVIRVLGEQDDPATETEAVIVK
HCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
YGLRGEFPADVLEEANAIPTRIPPESLVGRLDLREFNIFTVDGRDAKDFDDAIHIQPTPE
ECCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCC
GTFVVGVHIADVSHYVREGTPLDQEAYARATSVYLPGRVLPMLPEHLSNGVCSLVPFEDR
CCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHEEECCCCHHHHHHHHHCCCCEEEECCCCC
LTVTALIELSAEGDILDVKLAPSVINSKARLTYDEVQAYSEATSTLPEHARHLEGDLHLL
EEEEEEEEECCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LKITSKLRQKRLREGSLDFKLREVKVDVGPDGRMELIPIHEETARGMIEDLMLLANKVVA
HHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
HYLIERGIPTLFRIHEEPTLQRFQEATAAIARLGLAFPGGEPTPQAYQAVLKAVRGTPRE
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHH
SVVNTLLLRSLQQAKYAGENLGHFGLAFAEYLHFTSPIRRYPDLFVHRVLKAVLSGDLKA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSRAVAELRSQLPAMGDHTSERERKAAEAERDLTKYYQAKWAQEHLGERFSGNVTGVVSS
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECC
GLFVALDNGVEGKLHISNLDDDYYIYLEDAQMLRGRSGGRTFRLGDPITVTISQVNPLAR
CEEEEECCCCCCEEEEECCCCCEEEEEECHHHHCCCCCCCEEECCCCEEEEEECCCHHHH
QIDFTQENDMDSNDNTARPRARRREDREAEKRQKLQSVNPAPPRKFTLDDPQPAVPSAPP
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCC
RQSGQGRGGRGQGQREGSQREANPSGGRAPLRQSGSFKRRVITLERPRNEHLRPVNITVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEE
RMYFGDWTVDNLPPDDGQHGGRGFDRSDRGGRGPGFSRGGNDRGAVRDLNGRQGGSRQVR
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
PSAPPPQVTSQADAAQPGNDTDGKRRRRRRGRRGGNGNSSQG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AEAATLAPPKRTPRQAKASTAAPPPVAEGSAAAEPTATKPRRSRRASPAVKPEDGQTSA
CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
EPAPQPEAPARPSRRGRKAQTAELPQLEPVQREPEAVTAQAPTEERPTRARRGRKSKAEA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHCCCCHHHHC
APEVLPPVAEPTDPVLLEVPKPTRRGRKSRAAAPEAAPEAAPEPAPVLPDVPLDEVLGGV
CCHHCCCCCCCCCCEEEECCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC
EPVEVEESTPDAEATLSVTGKAQTDPPEPVVDTPRVEEVDLPGRHPSAAATPPARLTHPE
CCEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
EVEEQAEETADPARELVIAQLRKLGRPIHVRDLERTFTRQMLDRLGGWRDLEALLDDLTR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TGEVIRTRRRTYGLPEAMSLVRGRFQASPTGFGFVIPDAGGEDFYVAPEDTLEAWNGDTV
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECCHHHHHHCCCCEE
LVRMEGRGDSGRSPGPRRGQRGDGSPRASVARIVQRAYRHLVGTLEFSKGHPILKADDPR
EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCEECCCCH
ARHRILLLPEGLEGLASGARVVAELYWPEQTGEDEVFGQVIRVLGEQDDPATETEAVIVK
HCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEE
YGLRGEFPADVLEEANAIPTRIPPESLVGRLDLREFNIFTVDGRDAKDFDDAIHIQPTPE
ECCCCCCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCEEEEEECCC
GTFVVGVHIADVSHYVREGTPLDQEAYARATSVYLPGRVLPMLPEHLSNGVCSLVPFEDR
CCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHEEECCCCHHHHHHHHHCCCCEEEECCCCC
LTVTALIELSAEGDILDVKLAPSVINSKARLTYDEVQAYSEATSTLPEHARHLEGDLHLL
EEEEEEEEECCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LKITSKLRQKRLREGSLDFKLREVKVDVGPDGRMELIPIHEETARGMIEDLMLLANKVVA
HHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
HYLIERGIPTLFRIHEEPTLQRFQEATAAIARLGLAFPGGEPTPQAYQAVLKAVRGTPRE
HHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHH
SVVNTLLLRSLQQAKYAGENLGHFGLAFAEYLHFTSPIRRYPDLFVHRVLKAVLSGDLKA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GSRAVAELRSQLPAMGDHTSERERKAAEAERDLTKYYQAKWAQEHLGERFSGNVTGVVSS
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCEEEEECC
GLFVALDNGVEGKLHISNLDDDYYIYLEDAQMLRGRSGGRTFRLGDPITVTISQVNPLAR
CEEEEECCCCCCEEEEECCCCCEEEEEECHHHHCCCCCCCEEECCCCEEEEEECCCHHHH
QIDFTQENDMDSNDNTARPRARRREDREAEKRQKLQSVNPAPPRKFTLDDPQPAVPSAPP
HCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCC
RQSGQGRGGRGQGQREGSQREANPSGGRAPLRQSGSFKRRVITLERPRNEHLRPVNITVQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEE
RMYFGDWTVDNLPPDDGQHGGRGFDRSDRGGRGPGFSRGGNDRGAVRDLNGRQGGSRQVR
EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
PSAPPPQVTSQADAAQPGNDTDGKRRRRRRGRRGGNGNSSQG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]