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The map label for this gene is ctaB [H]

Identifier: 94984517

GI number: 94984517

Start: 417804

End: 418784

Strand: Reverse

Name: ctaB [H]

Synonym: Dgeo_0409

Alternate gene names: 94984517

Gene position: 418784-417804 (Counterclockwise)

Preceding gene: 94984520

Following gene: 94984516

Centisome position: 16.97

GC content: 68.91

Gene sequence:

>981_bases
ATGAGCACCCTCACGGTGCCGCGGTCCCGGGCCGATGTCTGGTTGACCCGGCTGGCCTGGGCCGCTTTGGTCTACAACGT
GCTGGTGATTCTCTGGGGCGCGGTTGTGCGCCTCACGGGCGCCGGTGCGGGGTGCGGCGCCCACTGGCCGCTGTGTAACG
GCGTGGTGGTGCCGCAAAGCCCAGCACTCCACACGGTGATCGAGTTCAGCCACCGGCTGACCAGTGGCGCCAGTGGCCTG
CTGGCGCTCGGGCTCATCGCGCTGGCTTTCCGAACCACTCCCAAAGGCCACCCGGCGCGGCTGGGCGCGGTTCTGACCTT
CCTGCTGATCCTGGCGGAGGGACTGGTGGGCGGCGTGCAGGTGCTGCTGGGACTGACCGCCGACTCCACGGATCCAGCCC
GTGGCCTGGTGCAGGGCGTGCATCTGGCCAACACCTTCCTGCTGCTGGGGGCGCTGCTGCTCACGGCGCTGTGGGCGTCG
GGCCGTCCGGTGCTGCGGCTGCGCGGGCAGGGCCGCACCCTGGGTCTGATTACCTTTGGCCTGGCGCTCACGCTGCTGCT
GGGGATGGCGGGCGCCGTGACGGCGCTGGGCGACCTGCTGTTTGCACCTGCGCCTGGCACGCCGATCGACACGGTACGCC
GAGACTTTGGGGCCACCGCCTCCCTGATTCAGAACCTGCGCGTGATTCACCCCCTGCTGGCCATCTTGGACAGCGCCTAT
CTGGTCTGGCTGGTGGGGGCGCTGCGCCGCTTGCGGCCCTCGCCTGGAGTGATGCGCTGGGGCACAGTGCTGCTGAGTGT
GATTGGCCTTCAGGTGCTGGCCGGCTTCGTGAATGTGGCGCTGCGGGCCCCCGCCTGGATGCAGCTCACTCACCTGCTGC
TGGCGTGCATCATGTGGCTGGTGATGGTTTTGCTCAGCTACGAGGCGCTCACAGCGCTGCGCCGTGTTCCCCAACCAGCA
CGCCAACCGGTGGCAGTATGA

Upstream 100 bases:

>100_bases
CTGGAAATCCGACCAAAGGGAGAAGGAGACCGGACGGCTTCCGGAAGATGGCGGAACTCCGGACATTCTCCCGGAGGTCA
GGGCAGCGGACGGAAGCCGT

Downstream 100 bases:

>100_bases
CGGTTGACCGCATGACGCCCCCTTCGGGTGTGGGCCACACCACCCGTCCCCTGCGGGCCACCTGGCGCGACTACCTGGCC
CTGACCAAGCCCAAGGTCAT

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: Heme B farnesyltransferase; Heme O synthase [H]

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSTLTVPRSRADVWLTRLAWAALVYNVLVILWGAVVRLTGAGAGCGAHWPLCNGVVVPQSPALHTVIEFSHRLTSGASGL
LALGLIALAFRTTPKGHPARLGAVLTFLLILAEGLVGGVQVLLGLTADSTDPARGLVQGVHLANTFLLLGALLLTALWAS
GRPVLRLRGQGRTLGLITFGLALTLLLGMAGAVTALGDLLFAPAPGTPIDTVRRDFGATASLIQNLRVIHPLLAILDSAY
LVWLVGALRRLRPSPGVMRWGTVLLSVIGLQVLAGFVNVALRAPAWMQLTHLLLACIMWLVMVLLSYEALTALRRVPQPA
RQPVAV

Sequences:

>Translated_326_residues
MSTLTVPRSRADVWLTRLAWAALVYNVLVILWGAVVRLTGAGAGCGAHWPLCNGVVVPQSPALHTVIEFSHRLTSGASGL
LALGLIALAFRTTPKGHPARLGAVLTFLLILAEGLVGGVQVLLGLTADSTDPARGLVQGVHLANTFLLLGALLLTALWAS
GRPVLRLRGQGRTLGLITFGLALTLLLGMAGAVTALGDLLFAPAPGTPIDTVRRDFGATASLIQNLRVIHPLLAILDSAY
LVWLVGALRRLRPSPGVMRWGTVLLSVIGLQVLAGFVNVALRAPAWMQLTHLLLACIMWLVMVLLSYEALTALRRVPQPA
RQPVAV
>Mature_325_residues
STLTVPRSRADVWLTRLAWAALVYNVLVILWGAVVRLTGAGAGCGAHWPLCNGVVVPQSPALHTVIEFSHRLTSGASGLL
ALGLIALAFRTTPKGHPARLGAVLTFLLILAEGLVGGVQVLLGLTADSTDPARGLVQGVHLANTFLLLGALLLTALWASG
RPVLRLRGQGRTLGLITFGLALTLLLGMAGAVTALGDLLFAPAPGTPIDTVRRDFGATASLIQNLRVIHPLLAILDSAYL
VWLVGALRRLRPSPGVMRWGTVLLSVIGLQVLAGFVNVALRAPAWMQLTHLLLACIMWLVMVLLSYEALTALRRVPQPAR
QPVAV

Specific function: Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group [H]

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the ubiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003780
- InterPro:   IPR006369
- InterPro:   IPR000537 [H]

Pfam domain/function: PF02628 COX15-CtaA; PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 34439; Mature: 34308

Theoretical pI: Translated: 12.06; Mature: 12.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLTVPRSRADVWLTRLAWAALVYNVLVILWGAVVRLTGAGAGCGAHWPLCNGVVVPQS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC
PALHTVIEFSHRLTSGASGLLALGLIALAFRTTPKGHPARLGAVLTFLLILAEGLVGGVQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLLGLTADSTDPARGLVQGVHLANTFLLLGALLLTALWASGRPVLRLRGQGRTLGLITFG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
LALTLLLGMAGAVTALGDLLFAPAPGTPIDTVRRDFGATASLIQNLRVIHPLLAILDSAY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LVWLVGALRRLRPSPGVMRWGTVLLSVIGLQVLAGFVNVALRAPAWMQLTHLLLACIMWL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VMVLLSYEALTALRRVPQPARQPVAV
HHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
STLTVPRSRADVWLTRLAWAALVYNVLVILWGAVVRLTGAGAGCGAHWPLCNGVVVPQS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCC
PALHTVIEFSHRLTSGASGLLALGLIALAFRTTPKGHPARLGAVLTFLLILAEGLVGGVQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VLLGLTADSTDPARGLVQGVHLANTFLLLGALLLTALWASGRPVLRLRGQGRTLGLITFG
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH
LALTLLLGMAGAVTALGDLLFAPAPGTPIDTVRRDFGATASLIQNLRVIHPLLAILDSAY
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LVWLVGALRRLRPSPGVMRWGTVLLSVIGLQVLAGFVNVALRAPAWMQLTHLLLACIMWL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VMVLLSYEALTALRRVPQPARQPVAV
HHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA