Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

Click here to switch to the map view.

The map label for this gene is 94984352

Identifier: 94984352

GI number: 94984352

Start: 230425

End: 230916

Strand: Reverse

Name: 94984352

Synonym: Dgeo_0244

Alternate gene names: NA

Gene position: 230916-230425 (Counterclockwise)

Preceding gene: 94984355

Following gene: 94984351

Centisome position: 9.36

GC content: 67.07

Gene sequence:

>492_bases
ATGAAGGCCATGAGTCAGACCGACCCGCGCGCTGCGGCTCAGGCCCTCGCGGCCCTTGACTGGAGCCGCGCCCACCGCAC
GCCCATTCAGATGCGCTACGGCGACATTGATGCGATGGGCCACCTCAACAACGCCGTGTACGTGCAGTACCTCGAAACGT
CCCGGGTCATCCTGATGCGCGACCTGGGCGTCCACGACCAGGACGACCGTTCGGTGATTGCTCGCCTGGAACTCGACTAC
CGCCAGGAGGTGCTGTGGGGCCAGGCCGTGGTCGTGGAATCCTTGGTGGAACGGGTGGGCCGCACGAGTTGGACCATTGT
CTCGCGCCTGAGTGCAGACGGCGTGCCCTGCGCCTATGCCCGAACCGTGCAGGTGCGGGTGGATGAGGCCCACCGCCCAG
AAGTCCTTCCCGAGCGCATCCGGGCGGCCTTCGCGCCCCTGTTGATTGCCTCGTCGCCAGTCGCCGAGCTGCAAGAGAGC
CTGCCCGGGTGA

Upstream 100 bases:

>100_bases
TGGGAGGACAGCGGAGGCGGCGGGTCGGGGGGCGTCATGCCCCAGAGCATAGCGTCCAGCTGGATGAGGAGGCAGGGAGC
CCTCCTGCGGAAACCGCATA

Downstream 100 bases:

>100_bases
GTCGCGCGTACTACGAAGACCGGGTGTTGTATCAGGGCGACGTCTGGGTACGCCTCGACACCCTGCCGCGCCTGCTGGCG
GAAGGCTGGCGGCGCACGCT

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Family Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMRDLGVHDQDDRSVIARLELDY
RQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYARTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQES
LPG

Sequences:

>Translated_163_residues
MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMRDLGVHDQDDRSVIARLELDY
RQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYARTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQES
LPG
>Mature_163_residues
MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMRDLGVHDQDDRSVIARLELDY
RQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYARTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQES
LPG

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18190; Mature: 18190

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEEEEEECCCCEEEEE
DLGVHDQDDRSVIARLELDYRQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEE
RTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQESLPG
EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC
>Mature Secondary Structure
MKAMSQTDPRAAAQALAALDWSRAHRTPIQMRYGDIDAMGHLNNAVYVQYLETSRVILMR
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCEEEEEEECCCCEEEEE
DLGVHDQDDRSVIARLELDYRQEVLWGQAVVVESLVERVGRTSWTIVSRLSADGVPCAYA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEE
RTVQVRVDEAHRPEVLPERIRAAFAPLLIASSPVAELQESLPG
EEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA