| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
Click here to switch to the map view.
The map label for this gene is czcD [H]
Identifier: 94984323
GI number: 94984323
Start: 199697
End: 200596
Strand: Reverse
Name: czcD [H]
Synonym: Dgeo_0215
Alternate gene names: 94984323
Gene position: 200596-199697 (Counterclockwise)
Preceding gene: 94984324
Following gene: 94984321
Centisome position: 8.13
GC content: 70.22
Gene sequence:
>900_bases GTGAGCGAACACAGCCACGGGGGGCATCGCCACGGCCGGGACGCGAGCGCCCGCCAGCTTCGCCTGGCGCTGGCGCTGAC CGGGGCGTTTCTCGTCGTGGAGGTGATCTACGGCTTCCTGTCGGGCAGCCTGGCGCTGCTCTCGGACGCCGGGCACATGC TCACCGACGTGGCAGCGCTGGCCCTCTCGCTCCTCGCCCTCCGCCTGGGCCGGCGCCCCGCCGACCGCCGGCGCACCTTC GGCTACCGCCGCAGCGAGATTCTGGCGGCGGCTCTGAACGCCGGGGCGCTGTTTGCCATCGGCATTTCCATCCTGGTGGA GGCCTATGGGCGATTGCGCGAGCCGGTGGCGGTCCAGACCACACCGATGCTGGTCGTGGCGCTGCTAGGGTTGATCGTGA ACCTGCTCAGTGCGCGCATCCTGGCCGGGGGCGCGGAGGACAGCCTGAACGTACGATCGGCGTATCTGGAGGTGTTGGGC GACCTGCTGGGATCCGTGGCGGTGATCATCGGAGCGTTGGTGATTCGCCTCACGGGCCTGACCTGGGTGGACCCGGTGCT GGGCGCGGGCATCGGCCTGTGGGTGTTGCCGCGCGCCTGGTCACTGCTGCGTTCGAGCGTGAACGTCCTGCTCGAAGGGG TACCCGAGGGCCTCGACCTCGACGCCCTGCGTGCGGACCTGCGTGCTCTGCCCGGCGTGCAGGAGGTCCACGACCTGCAT GTCTGGAGCGTGACGAGCGGCGAACACCATCTCACCGCCCACCTCGTCAGCGCCGAGACTCCGGCTGACCTGCTGCCCCA GGTCCACGAGGTCGCGGAGCGCTACGGCATCGAGCACGTGACCGTGCAGGTGGAGCCGGAGGGCGTGCACGCAGGACACA CCGAGCACCTGCACCCCTGA
Upstream 100 bases:
>100_bases GCGAGGAGGCCGCCCACGCCGCCGCCCGCAGGCAGGTGCGCGAACTCTTCCCGGCCCTGGCCAAGCAACTGTCCGGGCAG GACGGGGAGCAGGCCGGGGC
Downstream 100 bases:
>100_bases ACACCGGCACCCCTGAGGAGACCTACGCTTCCCCCTCCAAGCGCGCGAGATCCTCTGGCGTATCCACATCGGTCAGCAGG TCAGCCGGCAAGCGCAGTGT
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MSEHSHGGHRHGRDASARQLRLALALTGAFLVVEVIYGFLSGSLALLSDAGHMLTDVAALALSLLALRLGRRPADRRRTF GYRRSEILAAALNAGALFAIGISILVEAYGRLREPVAVQTTPMLVVALLGLIVNLLSARILAGGAEDSLNVRSAYLEVLG DLLGSVAVIIGALVIRLTGLTWVDPVLGAGIGLWVLPRAWSLLRSSVNVLLEGVPEGLDLDALRADLRALPGVQEVHDLH VWSVTSGEHHLTAHLVSAETPADLLPQVHEVAERYGIEHVTVQVEPEGVHAGHTEHLHP
Sequences:
>Translated_299_residues MSEHSHGGHRHGRDASARQLRLALALTGAFLVVEVIYGFLSGSLALLSDAGHMLTDVAALALSLLALRLGRRPADRRRTF GYRRSEILAAALNAGALFAIGISILVEAYGRLREPVAVQTTPMLVVALLGLIVNLLSARILAGGAEDSLNVRSAYLEVLG DLLGSVAVIIGALVIRLTGLTWVDPVLGAGIGLWVLPRAWSLLRSSVNVLLEGVPEGLDLDALRADLRALPGVQEVHDLH VWSVTSGEHHLTAHLVSAETPADLLPQVHEVAERYGIEHVTVQVEPEGVHAGHTEHLHP >Mature_298_residues SEHSHGGHRHGRDASARQLRLALALTGAFLVVEVIYGFLSGSLALLSDAGHMLTDVAALALSLLALRLGRRPADRRRTFG YRRSEILAAALNAGALFAIGISILVEAYGRLREPVAVQTTPMLVVALLGLIVNLLSARILAGGAEDSLNVRSAYLEVLGD LLGSVAVIIGALVIRLTGLTWVDPVLGAGIGLWVLPRAWSLLRSSVNVLLEGVPEGLDLDALRADLRALPGVQEVHDLHV WSVTSGEHHLTAHLVSAETPADLLPQVHEVAERYGIEHVTVQVEPEGVHAGHTEHLHP
Specific function: Necessary for activation of the czc determinant [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI52352805, Length=297, Percent_Identity=28.6195286195286, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI21361112, Length=297, Percent_Identity=32.6599326599327, Blast_Score=129, Evalue=4e-30, Organism=Homo sapiens, GI21359890, Length=305, Percent_Identity=30.1639344262295, Blast_Score=125, Evalue=4e-29, Organism=Homo sapiens, GI64762489, Length=271, Percent_Identity=32.1033210332103, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI289803013, Length=273, Percent_Identity=31.8681318681319, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI289803009, Length=273, Percent_Identity=31.8681318681319, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI289803007, Length=273, Percent_Identity=31.8681318681319, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI289803003, Length=273, Percent_Identity=31.8681318681319, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI20070323, Length=321, Percent_Identity=27.4143302180685, Blast_Score=111, Evalue=7e-25, Organism=Homo sapiens, GI52351208, Length=150, Percent_Identity=31.3333333333333, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI14210520, Length=144, Percent_Identity=29.8611111111111, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI52352803, Length=121, Percent_Identity=43.801652892562, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI222080086, Length=123, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI40255009, Length=123, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1786966, Length=284, Percent_Identity=48.5915492957746, Blast_Score=188, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17555794, Length=310, Percent_Identity=33.8709677419355, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17555796, Length=285, Percent_Identity=34.7368421052632, Blast_Score=153, Evalue=1e-37, Organism=Caenorhabditis elegans, GI193210990, Length=314, Percent_Identity=32.1656050955414, Blast_Score=149, Evalue=1e-36, Organism=Caenorhabditis elegans, GI32564488, Length=301, Percent_Identity=32.890365448505, Blast_Score=140, Evalue=8e-34, Organism=Caenorhabditis elegans, GI17550442, Length=122, Percent_Identity=31.1475409836066, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17550440, Length=122, Percent_Identity=31.1475409836066, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6320411, Length=190, Percent_Identity=36.3157894736842, Blast_Score=89, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6323899, Length=143, Percent_Identity=37.7622377622378, Blast_Score=87, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6324892, Length=122, Percent_Identity=37.7049180327869, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI24583858, Length=330, Percent_Identity=26.969696969697, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24656728, Length=124, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24656724, Length=124, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24656720, Length=124, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24656715, Length=124, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI21357035, Length=124, Percent_Identity=38.7096774193548, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24585900, Length=148, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24585898, Length=148, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24585896, Length=148, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI19921672, Length=148, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24584409, Length=136, Percent_Identity=33.8235294117647, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI28574430, Length=136, Percent_Identity=33.8235294117647, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24645863, Length=123, Percent_Identity=39.0243902439024, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 31855; Mature: 31724
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHSHGGHRHGRDASARQLRLALALTGAFLVVEVIYGFLSGSLALLSDAGHMLTDVAAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHH ALSLLALRLGRRPADRRRTFGYRRSEILAAALNAGALFAIGISILVEAYGRLREPVAVQT HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECH TPMLVVALLGLIVNLLSARILAGGAEDSLNVRSAYLEVLGDLLGSVAVIIGALVIRLTGL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TWVDPVLGAGIGLWVLPRAWSLLRSSVNVLLEGVPEGLDLDALRADLRALPGVQEVHDLH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHEE VWSVTSGEHHLTAHLVSAETPADLLPQVHEVAERYGIEHVTVQVEPEGVHAGHTEHLHP EEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure SEHSHGGHRHGRDASARQLRLALALTGAFLVVEVIYGFLSGSLALLSDAGHMLTDVAAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHH ALSLLALRLGRRPADRRRTFGYRRSEILAAALNAGALFAIGISILVEAYGRLREPVAVQT HHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECH TPMLVVALLGLIVNLLSARILAGGAEDSLNVRSAYLEVLGDLLGSVAVIIGALVIRLTGL HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TWVDPVLGAGIGLWVLPRAWSLLRSSVNVLLEGVPEGLDLDALRADLRALPGVQEVHDLH HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHEE VWSVTSGEHHLTAHLVSAETPADLLPQVHEVAERYGIEHVTVQVEPEGVHAGHTEHLHP EEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8829543 [H]