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The map label for this gene is nifU [H]

Identifier: 94984315

GI number: 94984315

Start: 192980

End: 193402

Strand: Reverse

Name: nifU [H]

Synonym: Dgeo_0207

Alternate gene names: 94984315

Gene position: 193402-192980 (Counterclockwise)

Preceding gene: 94984316

Following gene: 94984311

Centisome position: 7.84

GC content: 74.23

Gene sequence:

>423_bases
ATGCTGCCCGAGGCCCTCGCCCGCCAAATCATCACGGACCACAGCCAGCACCCGCGCGGCCGGGGGGAGATCGCGGGTGT
GCCCCACGCCACGCGCGAGAACCCCGGCTGCGGCGATCAGGTGACGGTCTGGGCGCGAGTGGAGGGTGGGCGGCTGTTGG
AGGTGCGCTTCACCGGGCGCGGCTGCGCGATCAGCCAGGCCAGCGCCAGCCTGATGACCCAGGCCCTCGCCGGCAAGGGA
CTGGAGGAAGCCCGTGCCCTCGCCGCCCGCTACCGCGCGATGGTGATGGGCGAGGCGCCCCCAGACCCCGCCCTCGGGGA
CCTCGTCGCGCTCGGGGGTGTGAGCCGCTTGCACGCCCGGCGCAAGTGCGCGCTGCTGGCGTGGCAAGCGTTGGAAGCCG
CGCTGGCGGGGCCACATGAGTGA

Upstream 100 bases:

>100_bases
TTCACCCTCGACGAGGCCAGCCTGGAAACCGGGGTCCGGATGCTGCATGCGGCTGCGCTGCGCCTCACGCTGCCGCAGCC
GCACCCGCAAGGATAAGGCC

Downstream 100 bases:

>100_bases
TACCCTGCCCGTTCCTCGGAGACGGGTCTGCCCCTGAGCCTCTTCAGCGGCTGCGGAGGGTGTTCTGCACCGCGCTCATG
AACTCGGCACGGGTGCGGGC

Product: SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLPEALARQIITDHSQHPRGRGEIAGVPHATRENPGCGDQVTVWARVEGGRLLEVRFTGRGCAISQASASLMTQALAGKG
LEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHARRKCALLAWQALEAALAGPHE

Sequences:

>Translated_140_residues
MLPEALARQIITDHSQHPRGRGEIAGVPHATRENPGCGDQVTVWARVEGGRLLEVRFTGRGCAISQASASLMTQALAGKG
LEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHARRKCALLAWQALEAALAGPHE
>Mature_140_residues
MLPEALARQIITDHSQHPRGRGEIAGVPHATRENPGCGDQVTVWARVEGGRLLEVRFTGRGCAISQASASLMTQALAGKG
LEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHARRKCALLAWQALEAALAGPHE

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 14762; Mature: 14762

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPEALARQIITDHSQHPRGRGEIAGVPHATRENPGCGDQVTVWARVEGGRLLEVRFTGR
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCC
GCAISQASASLMTQALAGKGLEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHAR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHH
RKCALLAWQALEAALAGPHE
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLPEALARQIITDHSQHPRGRGEIAGVPHATRENPGCGDQVTVWARVEGGRLLEVRFTGR
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCC
GCAISQASASLMTQALAGKGLEEARALAARYRAMVMGEAPPDPALGDLVALGGVSRLHAR
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHH
RKCALLAWQALEAALAGPHE
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]