| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94984308
Identifier: 94984308
GI number: 94984308
Start: 184526
End: 185497
Strand: Reverse
Name: 94984308
Synonym: Dgeo_0200
Alternate gene names: NA
Gene position: 185497-184526 (Counterclockwise)
Preceding gene: 94984309
Following gene: 94984301
Centisome position: 7.52
GC content: 72.12
Gene sequence:
>972_bases ATGAGGGTCGCCGTCAGCGGCTACTACGGGTTCGGCAACACCGGGGACGAGGCCATCGCGCTGGCGATCACCCGCGAACT GAAACGACAGGGAGCGGTGCCGCTCCTCCTTTCCCAGACGCCCGCCGAGACGGCCCGCGCCTACGGCTGCGAGAGTGCCG CACGCATGAACCCCGCGGCGCTGCTGGGTGCGCTGGCCCGTTCCCAGGTGCTGCTGTCGGGGGGCGGAGGCCTCTTGCAG GACAAGACCAGTGCCCGTACCCTTCAGTACTACCTGGGCGTCATCCAGCTGGCGCGGCGGCTGGGGAGGCGGGTGGTCAT CTTCAACCAGAGCATCGGACCGCTGAGCGAGGCAGGCGGGCGCCGGGTGGCGGCGGCGCTGCGGGGCCTGCGGGTGATTG TGCGCGACCGGGGCAGTCTGGACACGCTGCGGGCGCTGGGCATCGAGGGCGAACTGGGAGGCGACCCAGCGCTGCTGCTC TCCCCCACGCCCGGCCTGGACCAGGACACCCAACGGGTCATCGTGGCACCGCGGGGCGACGTGACGGATGCAACGGAAAG GCTGAAGACGGTCACCGCCCACCTGCGCGCACAGGGGCGACGCGTCACCGCTCTGGCTTTGATGCCGGAGCAAGATGATC CGGCGGCGCGCAGCCTGGGGGCGGACGAGGTGCTCAGCACCCGTGATCCACAGGCCGCGCTGGATGCCATCGCCGCCGCG GGCTTTGTGGTTGGTGTGCGGCTCCACGCGGTGATTCTGGCCGCCGCCGCCGGGGTCCCCTTCGCCGGCGTCAGCTACGA CCCCAAGGTGCAGGGCTTCTGCGCGGACGCGGGCGCCCCCGCCTGCCCGACGGCCTTTGACCCCACGGACCTCTCTCAGC AGGCCCTGGCGCGGACCGCGCCCGACTGGGCGGCAGTGGCCGAGATGCAGGCGCGGGCGGCGCGGAGTTTTACGCGGGCG CTGGCCGAATAG
Upstream 100 bases:
>100_bases TGCTGGGGCTGATCGCCCTGCCGGTGGTGCAGTTCCTGCTGCGCTTCTGGAACACCCACGGCGCCCGCCGCGTCCCGGTC GATGCCGCCGAGGTGCAGGC
Downstream 100 bases:
>100_bases GCTGGCCCTCAGTCCGCAGCGTGCGTGACCACGTTGCAGGTGCAGCGCGCCAGCGTCGTCGTGCGGCCCCGTTCGTCCCG GACCTCGACGGTCCAGACCA
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: Polysaccharide Pyruvyl Transferase CsaB; Pyruvyl-Transferase; Polysaccharide Pyruvyl Transferase Csab; Polysaccharide Pyruvyl Transferase Superfamily; Polysaccharide Pyruvyl Transferase Family; Polysaccharide Pyruvyl Transferase Superfamily Protein; Polysaccharide Pyruvyl Transferase Family Protein; CsaB Protein; Glycosyl Transferase WecB/TagA/CpsF Family; Polysaccharide Pyruvyl-Transferase; WecB/TagA/CpsF Family Glycosyl Transferase
Number of amino acids: Translated: 323; Mature: 323
Protein sequence:
>323_residues MRVAVSGYYGFGNTGDEAIALAITRELKRQGAVPLLLSQTPAETARAYGCESAARMNPAALLGALARSQVLLSGGGGLLQ DKTSARTLQYYLGVIQLARRLGRRVVIFNQSIGPLSEAGGRRVAAALRGLRVIVRDRGSLDTLRALGIEGELGGDPALLL SPTPGLDQDTQRVIVAPRGDVTDATERLKTVTAHLRAQGRRVTALALMPEQDDPAARSLGADEVLSTRDPQAALDAIAAA GFVVGVRLHAVILAAAAGVPFAGVSYDPKVQGFCADAGAPACPTAFDPTDLSQQALARTAPDWAAVAEMQARAARSFTRA LAE
Sequences:
>Translated_323_residues MRVAVSGYYGFGNTGDEAIALAITRELKRQGAVPLLLSQTPAETARAYGCESAARMNPAALLGALARSQVLLSGGGGLLQ DKTSARTLQYYLGVIQLARRLGRRVVIFNQSIGPLSEAGGRRVAAALRGLRVIVRDRGSLDTLRALGIEGELGGDPALLL SPTPGLDQDTQRVIVAPRGDVTDATERLKTVTAHLRAQGRRVTALALMPEQDDPAARSLGADEVLSTRDPQAALDAIAAA GFVVGVRLHAVILAAAAGVPFAGVSYDPKVQGFCADAGAPACPTAFDPTDLSQQALARTAPDWAAVAEMQARAARSFTRA LAE >Mature_323_residues MRVAVSGYYGFGNTGDEAIALAITRELKRQGAVPLLLSQTPAETARAYGCESAARMNPAALLGALARSQVLLSGGGGLLQ DKTSARTLQYYLGVIQLARRLGRRVVIFNQSIGPLSEAGGRRVAAALRGLRVIVRDRGSLDTLRALGIEGELGGDPALLL SPTPGLDQDTQRVIVAPRGDVTDATERLKTVTAHLRAQGRRVTALALMPEQDDPAARSLGADEVLSTRDPQAALDAIAAA GFVVGVRLHAVILAAAAGVPFAGVSYDPKVQGFCADAGAPACPTAFDPTDLSQQALARTAPDWAAVAEMQARAARSFTRA LAE
Specific function: Unknown
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33627; Mature: 33627
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVAVSGYYGFGNTGDEAIALAITRELKRQGAVPLLLSQTPAETARAYGCESAARMNPAA CEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHHCCHHH LLGALARSQVLLSGGGGLLQDKTSARTLQYYLGVIQLARRLGRRVVIFNQSIGPLSEAGG HHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCC RRVAAALRGLRVIVRDRGSLDTLRALGIEGELGGDPALLLSPTPGLDQDTQRVIVAPRGD HHHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCC VTDATERLKTVTAHLRAQGRRVTALALMPEQDDPAARSLGADEVLSTRDPQAALDAIAAA CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHH GFVVGVRLHAVILAAAAGVPFAGVSYDPKVQGFCADAGAPACPTAFDPTDLSQQALARTA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCC PDWAAVAEMQARAARSFTRALAE CHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVAVSGYYGFGNTGDEAIALAITRELKRQGAVPLLLSQTPAETARAYGCESAARMNPAA CEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHHCCHHH LLGALARSQVLLSGGGGLLQDKTSARTLQYYLGVIQLARRLGRRVVIFNQSIGPLSEAGG HHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHCCC RRVAAALRGLRVIVRDRGSLDTLRALGIEGELGGDPALLLSPTPGLDQDTQRVIVAPRGD HHHHHHHHHHEEEECCCCCHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCC VTDATERLKTVTAHLRAQGRRVTALALMPEQDDPAARSLGADEVLSTRDPQAALDAIAAA CHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHH GFVVGVRLHAVILAAAAGVPFAGVSYDPKVQGFCADAGAPACPTAFDPTDLSQQALARTA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHCC PDWAAVAEMQARAARSFTRALAE CHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA